RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 DISP1Q96F81 1524 aa16.25■□□□□ 0.19
SMTN-218ENST00000489337 CCER2I3L3R5 266 aa16.25■□□□□ 0.19
SMTN-218ENST00000489337 DEKP35659 375 aaKnown RBP16.25■□□□□ 0.19
SMTN-218ENST00000489337 PTPRKQ15262 1439 aa16.24■□□□□ 0.19
SMTN-218ENST00000489337 EFCAB5A4FU69 1503 aa16.24■□□□□ 0.19
SMTN-218ENST00000489337 PPP1R15AO75807 674 aaPredicted RBP16.23■□□□□ 0.19
SMTN-218ENST00000489337 RRBP1Q9P2E9 1410 aaKnown RBP16.23■□□□□ 0.19
SMTN-218ENST00000489337 RGL3Q3MIN7 710 aa16.23■□□□□ 0.19
SMTN-218ENST00000489337 MAGI3Q5TCQ9 1506 aa16.23■□□□□ 0.19
SMTN-218ENST00000489337 ERCC6L2Q5T890 1561 aa16.21■□□□□ 0.19
SMTN-218ENST00000489337 MYOM3Q5VTT5 1437 aa16.2■□□□□ 0.18
SMTN-218ENST00000489337 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
SMTN-218ENST00000489337 NUP153P49790 1475 aaKnown RBP16.19■□□□□ 0.18
SMTN-218ENST00000489337 AFAP1Q8N556 730 aa16.17■□□□□ 0.18
SMTN-218ENST00000489337 TONSLQ96HA7 1378 aa16.16■□□□□ 0.18
SMTN-218ENST00000489337 ARHGEF11O15085 1522 aa16.16■□□□□ 0.18
SMTN-218ENST00000489337 HNRNPUQ00839 825 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMTN-218ENST00000489337 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
SMTN-218ENST00000489337 MPHOSPH9Q99550 1183 aa16.14■□□□□ 0.17
SMTN-218ENST00000489337 KIAA0556O60303 1618 aa16.14■□□□□ 0.17
SMTN-218ENST00000489337 MAPKBP1O60336 1514 aa16.13■□□□□ 0.17
SMTN-218ENST00000489337 NBR1Q14596 966 aa16.12■□□□□ 0.17
SMTN-218ENST00000489337 PKD2Q13563 968 aa16.11■□□□□ 0.17
SMTN-218ENST00000489337 SAMD9Q5K651 1589 aa16.11■□□□□ 0.17
SMTN-218ENST00000489337 NUP160Q12769 1436 aa16.11■□□□□ 0.17
SMTN-218ENST00000489337 CHD1O14646 1710 aa16.1■□□□□ 0.17
SMTN-218ENST00000489337 CHGAP10645 457 aaKnown RBP16.1■□□□□ 0.17
SMTN-218ENST00000489337 ATP10BO94823 1461 aa16.1■□□□□ 0.17
SMTN-218ENST00000489337 HECW1Q76N89 1606 aa16.08■□□□□ 0.16
SMTN-218ENST00000489337 UGGT2Q9NYU1 1516 aa16.07■□□□□ 0.16
SMTN-218ENST00000489337 LRRIQ1Q96JM4 1722 aa16.07■□□□□ 0.16
SMTN-218ENST00000489337 PPP4R2Q9NY27 417 aa16.07■□□□□ 0.16
SMTN-218ENST00000489337 ANO8Q9HCE9 1232 aaPredicted RBP16.06■□□□□ 0.16
SMTN-218ENST00000489337 TROQ12816 1431 aaPredicted RBP16.06■□□□□ 0.16
SMTN-218ENST00000489337 MLECQ14165 292 aa16.05■□□□□ 0.16
SMTN-218ENST00000489337 NOP58Q9Y2X3 529 aaKnown RBP16.05■□□□□ 0.16
SMTN-218ENST00000489337 UACAQ9BZF9 1416 aa16.04■□□□□ 0.16
SMTN-218ENST00000489337 NUP155O75694 1391 aa16.04■□□□□ 0.16
SMTN-218ENST00000489337 GGT6Q6P531 493 aa16.04■□□□□ 0.16
SMTN-218ENST00000489337 L3MBTL2Q969R5 705 aa16.04■□□□□ 0.16
SMTN-218ENST00000489337 RAPGEF6Q8TEU7 1601 aa16.04■□□□□ 0.16
SMTN-218ENST00000489337 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
SMTN-218ENST00000489337 SUPT6HQ7KZ85 1726 aaKnown RBP16.03■□□□□ 0.16
SMTN-218ENST00000489337 EHBP1L1Q8N3D4 1523 aa16.03■□□□□ 0.16
SMTN-218ENST00000489337 B4GALNT3Q6L9W6 998 aa16.02■□□□□ 0.16
SMTN-218ENST00000489337 NAIPQ13075 1403 aa16.02■□□□□ 0.15
SMTN-218ENST00000489337 KIF14Q15058 1648 aa16.02■□□□□ 0.15
SMTN-218ENST00000489337 ERICH6BQ5W0A0 696 aa16.01■□□□□ 0.15
SMTN-218ENST00000489337 RAPGEF3O95398 923 aa16.01■□□□□ 0.15
SMTN-218ENST00000489337 PTPN23Q9H3S7 1636 aa16■□□□□ 0.15
SMTN-218ENST00000489337 NUTM2DQ5VT03 806 aaPredicted RBP16■□□□□ 0.15
SMTN-218ENST00000489337 EFCAB2Q5VUJ9 269 aa16■□□□□ 0.15
SMTN-218ENST00000489337 CFAP43Q8NDM7 1665 aa16■□□□□ 0.15
SMTN-218ENST00000489337 KIF3BO15066 747 aa15.98■□□□□ 0.15
SMTN-218ENST00000489337 PAK3O75914 559 aaPredicted RBP15.98■□□□□ 0.15
SMTN-218ENST00000489337 RTL5Q5HYW3 569 aaPredicted RBP15.98■□□□□ 0.15
SMTN-218ENST00000489337 ABCC5O15440 1437 aa15.97■□□□□ 0.15
SMTN-218ENST00000489337 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
SMTN-218ENST00000489337 GPATCH8Q9UKJ3 1502 aaKnown RBP15.96■□□□□ 0.15
SMTN-218ENST00000489337 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
SMTN-218ENST00000489337 DAPK1P53355 1430 aa15.96■□□□□ 0.14
SMTN-218ENST00000489337 ARHGAP5Q13017 1502 aa15.95■□□□□ 0.14
SMTN-218ENST00000489337 FAM69CQ0P6D2 419 aa15.94■□□□□ 0.14
SMTN-218ENST00000489337 MAP3K1Q13233 1512 aa15.94■□□□□ 0.14
SMTN-218ENST00000489337 CAMSAP2Q08AD1 1489 aa15.93■□□□□ 0.14
SMTN-218ENST00000489337 SPAG9O60271 1321 aaKnown RBP15.93■□□□□ 0.14
SMTN-218ENST00000489337 SALL2Q9Y467 1007 aaPredicted RBP15.93■□□□□ 0.14
SMTN-218ENST00000489337 ANKRD30AQ9BXX3 1397 aa15.93■□□□□ 0.14
SMTN-218ENST00000489337 KIF15Q9NS87 1388 aa15.93■□□□□ 0.14
SMTN-218ENST00000489337 KDM6BO15054 1643 aa15.91■□□□□ 0.14
SMTN-218ENST00000489337 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
SMTN-218ENST00000489337 ANP32AP39687 249 aaKnown RBP15.9■□□□□ 0.14
SMTN-218ENST00000489337 ANKRD50Q9ULJ7 1429 aa15.88■□□□□ 0.13
SMTN-218ENST00000489337 FAM9BQ8IZU0 186 aa15.88■□□□□ 0.13
SMTN-218ENST00000489337 HSPA5P11021 654 aaKnown RBP15.88■□□□□ 0.13
SMTN-218ENST00000489337 NBPF8Q3BBV2 869 aa15.88■□□□□ 0.13
SMTN-218ENST00000489337 RTN4Q9NQC3 1192 aaKnown RBP15.87■□□□□ 0.13
SMTN-218ENST00000489337 SCAPERQ9BY12 1400 aa15.87■□□□□ 0.13
SMTN-218ENST00000489337 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
SMTN-218ENST00000489337 C9orf84Q5VXU9 1444 aa15.87■□□□□ 0.13
SMTN-218ENST00000489337 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
SMTN-218ENST00000489337 IL27Q8NEV9 243 aa15.85■□□□□ 0.13
SMTN-218ENST00000489337 IPO9Q96P70 1041 aaKnown RBP15.84■□□□□ 0.13
SMTN-218ENST00000489337 MIA2Q96PC5 1412 aa15.84■□□□□ 0.13
SMTN-218ENST00000489337 CCDC184Q52MB2 194 aa15.83■□□□□ 0.12
SMTN-218ENST00000489337 NCOA1Q15788 1441 aa15.83■□□□□ 0.12
SMTN-218ENST00000489337 ARID4BQ4LE39 1312 aaPredicted RBP15.82■□□□□ 0.12
SMTN-218ENST00000489337 EIF4G2P78344 907 aaKnown RBP eCLIP15.81■□□□□ 0.12
SMTN-218ENST00000489337 CARD11Q9BXL7 1154 aa15.81■□□□□ 0.12
SMTN-218ENST00000489337 MRS2Q9HD23 443 aa15.8■□□□□ 0.12
SMTN-218ENST00000489337 TRAPPC8Q9Y2L5 1435 aa15.8■□□□□ 0.12
SMTN-218ENST00000489337 ASXL2Q76L83 1435 aa15.79■□□□□ 0.12
SMTN-218ENST00000489337 SYCP2Q9BX26 1530 aa15.79■□□□□ 0.12
SMTN-218ENST00000489337 SAFB2Q14151 953 aaKnown RBP eCLIP15.79■□□□□ 0.12
SMTN-218ENST00000489337 ABCA8O94911 1581 aa15.79■□□□□ 0.12
SMTN-218ENST00000489337 WASHC2AQ641Q2 1341 aa15.78■□□□□ 0.12
SMTN-218ENST00000489337 PLEKHH2Q8IVE3 1493 aa15.77■□□□□ 0.11
SMTN-218ENST00000489337 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.77■□□□□ 0.11
SMTN-218ENST00000489337 ZBED9Q6R2W3 1325 aa15.76■□□□□ 0.11
SMTN-218ENST00000489337 NBPF1Q3BBV0 1214 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms