RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 MTUS2Q5JR59 1369 aa38.19■■■■□ 3.7
PTPN18-213ENST00000489215 PREX2Q70Z35 1606 aa38.15■■■■□ 3.7
PTPN18-213ENST00000489215 CDC42BPBQ9Y5S2 1711 aa38.15■■■■□ 3.7
PTPN18-213ENST00000489215 MAGI2Q86UL8 1455 aa38.15■■■■□ 3.7
PTPN18-213ENST00000489215 ZMYM4Q5VZL5 1548 aa38.13■■■■□ 3.69
PTPN18-213ENST00000489215 POGZQ7Z3K3 1410 aa38.12■■■■□ 3.69
PTPN18-213ENST00000489215 VPS8Q8N3P4 1428 aa38.11■■■■□ 3.69
PTPN18-213ENST00000489215 CDC42BPAQ5VT25 1732 aa38.07■■■■□ 3.69
PTPN18-213ENST00000489215 ZNF518AQ6AHZ1 1483 aa38.06■■■■□ 3.68
PTPN18-213ENST00000489215 EHBP1L1Q8N3D4 1523 aa38.06■■■■□ 3.68
PTPN18-213ENST00000489215 ARHGEF40Q8TER5 1519 aa38.06■■■■□ 3.68
PTPN18-213ENST00000489215 ZFYVE16Q7Z3T8 1539 aa38.02■■■■□ 3.68
PTPN18-213ENST00000489215 CCNB3Q8WWL7 1395 aa38.02■■■■□ 3.68
PTPN18-213ENST00000489215 GPATCH8Q9UKJ3 1502 aaKnown RBP38.01■■■■□ 3.67
PTPN18-213ENST00000489215 ARID4BQ4LE39 1312 aaPredicted RBP37.98■■■■□ 3.67
PTPN18-213ENST00000489215 CFDP1Q9UEE9 299 aaPredicted RBP37.96■■■■□ 3.67
PTPN18-213ENST00000489215 ABCC1P33527 1531 aa37.95■■■■□ 3.67
PTPN18-213ENST00000489215 TIAM1Q13009 1591 aa37.94■■■■□ 3.66
PTPN18-213ENST00000489215 AFAP1Q8N556 730 aa37.94■■■■□ 3.66
PTPN18-213ENST00000489215 KDM5CP41229 1560 aa37.93■■■■□ 3.66
PTPN18-213ENST00000489215 ZNF777Q9ULD5 760 aaPredicted RBP37.92■■■■□ 3.66
PTPN18-213ENST00000489215 YEATS2Q9ULM3 1422 aa37.92■■■■□ 3.66
PTPN18-213ENST00000489215 MAP3K1Q13233 1512 aa37.9■■■■□ 3.66
PTPN18-213ENST00000489215 PLEKHH2Q8IVE3 1493 aa37.9■■■■□ 3.66
PTPN18-213ENST00000489215 MYT1LQ9UL68 1186 aa37.89■■■■□ 3.66
PTPN18-213ENST00000489215 ITSN2Q9NZM3 1697 aa37.88■■■■□ 3.66
PTPN18-213ENST00000489215 SUPT6HQ7KZ85 1726 aaKnown RBP37.88■■■■□ 3.65
PTPN18-213ENST00000489215 ATP10AO60312 1499 aa37.88■■■■□ 3.65
PTPN18-213ENST00000489215 BCORL1Q5H9F3 1711 aa37.86■■■■□ 3.65
PTPN18-213ENST00000489215 MLH3Q9UHC1 1453 aa37.85■■■■□ 3.65
PTPN18-213ENST00000489215 KIAA1107Q9UPP5 1409 aa37.85■■■■□ 3.65
PTPN18-213ENST00000489215 HECW2Q9P2P5 1572 aa37.85■■■■□ 3.65
PTPN18-213ENST00000489215 ARHGEF12Q9NZN5 1544 aa37.84■■■■□ 3.65
PTPN18-213ENST00000489215 ADAMTSL3P82987 1691 aa37.84■■■■□ 3.65
PTPN18-213ENST00000489215 SAMD9LQ8IVG5 1584 aa37.84■■■■□ 3.65
PTPN18-213ENST00000489215 TRAPPC8Q9Y2L5 1435 aa37.83■■■■□ 3.65
PTPN18-213ENST00000489215 C9orf84Q5VXU9 1444 aa37.82■■■■□ 3.64
PTPN18-213ENST00000489215 APLP2Q06481 763 aa37.82■■■■□ 3.64
PTPN18-213ENST00000489215 LRRC9Q6ZRR7 1453 aa37.8■■■■□ 3.64
PTPN18-213ENST00000489215 NCOA2Q15596 1464 aa37.79■■■■□ 3.64
PTPN18-213ENST00000489215 SYCP2Q9BX26 1530 aa37.76■■■■□ 3.63
PTPN18-213ENST00000489215 HNRNPMP52272 730 aaKnown RBP eCLIP37.75■■■■□ 3.632e-8■■■■■ 35.4
PTPN18-213ENST00000489215 REREQ9P2R6 1566 aa37.7■■■■□ 3.63
PTPN18-213ENST00000489215 SPAG9O60271 1321 aaKnown RBP37.69■■■■□ 3.62
PTPN18-213ENST00000489215 DIP2CQ9Y2E4 1556 aa37.69■■■■□ 3.62
PTPN18-213ENST00000489215 PTPRMP28827 1452 aa37.68■■■■□ 3.62
PTPN18-213ENST00000489215 MADDQ8WXG6 1647 aa37.66■■■■□ 3.62
PTPN18-213ENST00000489215 KIDINS220Q9ULH0 1771 aa37.66■■■■□ 3.62
PTPN18-213ENST00000489215 SIGLEC1Q9BZZ2 1709 aa37.65■■■■□ 3.62
PTPN18-213ENST00000489215 RSPH4AQ5TD94 716 aa37.65■■■■□ 3.62
PTPN18-213ENST00000489215 KANK4Q5T7N3 995 aaPredicted RBP37.64■■■■□ 3.62
PTPN18-213ENST00000489215 ABCA6Q8N139 1617 aa37.64■■■■□ 3.62
PTPN18-213ENST00000489215 ZNF644Q9H582 1327 aaPredicted RBP37.61■■■■□ 3.61
PTPN18-213ENST00000489215 MLECQ14165 292 aa37.61■■■■□ 3.61
PTPN18-213ENST00000489215 AGLP35573 1532 aa37.58■■■■□ 3.61
PTPN18-213ENST00000489215 MBD5Q9P267 1494 aa37.58■■■■□ 3.61
PTPN18-213ENST00000489215 RIMS1Q86UR5 1692 aaKnown RBP37.56■■■■□ 3.6
PTPN18-213ENST00000489215 ATP7AQ04656 1500 aa37.56■■■■□ 3.6
PTPN18-213ENST00000489215 CAMSAP2Q08AD1 1489 aa37.54■■■■□ 3.6
PTPN18-213ENST00000489215 FER1L4A9Z1Z3 1794 aa37.53■■■■□ 3.6
PTPN18-213ENST00000489215 INO80Q9ULG1 1556 aaPredicted RBP37.53■■■■□ 3.6
PTPN18-213ENST00000489215 RTEL1-TNFRSF6BF6WH68 1400 aa37.52■■■■□ 3.6
PTPN18-213ENST00000489215 MIA2Q96PC5 1412 aa37.52■■■■□ 3.6
PTPN18-213ENST00000489215 MYOM3Q5VTT5 1437 aa37.49■■■■□ 3.59
PTPN18-213ENST00000489215 CCDC141Q6ZP82 1450 aa37.48■■■■□ 3.59
PTPN18-213ENST00000489215 ESF1Q9H501 851 aaKnown RBP37.45■■■■□ 3.59
PTPN18-213ENST00000489215 ARHGEF5Q12774 1597 aa37.44■■■■□ 3.58
PTPN18-213ENST00000489215 TSPY4P0CV99 314 aa37.44■■■■□ 3.58
PTPN18-213ENST00000489215 TSPY10P0CW01 314 aa37.44■■■■□ 3.58
PTPN18-213ENST00000489215 ADGBQ8N7X0 1667 aa37.42■■■■□ 3.58
PTPN18-213ENST00000489215 A2MP01023 1474 aa37.42■■■■□ 3.58
PTPN18-213ENST00000489215 PLXNC1O60486 1568 aa37.35■■■■□ 3.57
PTPN18-213ENST00000489215 CNTLNQ9NXG0 1405 aa37.33■■■■□ 3.57
PTPN18-213ENST00000489215 PLPPR3Q6T4P5 718 aa37.31■■■■□ 3.56
PTPN18-213ENST00000489215 DHX29Q7Z478 1369 aaKnown RBP37.3■■■■□ 3.56
PTPN18-213ENST00000489215 PPP6R1Q9UPN7 881 aa37.29■■■■□ 3.56
PTPN18-213ENST00000489215 MAST1Q9Y2H9 1570 aa37.24■■■■□ 3.55
PTPN18-213ENST00000489215 PTPN23Q9H3S7 1636 aa37.23■■■■□ 3.55
PTPN18-213ENST00000489215 FGD6Q6ZV73 1430 aa37.22■■■■□ 3.55
PTPN18-213ENST00000489215 SETD1BQ9UPS6 1966 aaKnown RBP37.22■■■■□ 3.55
PTPN18-213ENST00000489215 GGT6Q6P531 493 aa37.21■■■■□ 3.55
PTPN18-213ENST00000489215 CEBPAP49715 358 aaPredicted RBP37.2■■■■□ 3.55
PTPN18-213ENST00000489215 LMTK3Q96Q04 1460 aa37.19■■■■□ 3.54
PTPN18-213ENST00000489215 MROH2AA6NES4 1674 aa37.18■■■■□ 3.54
PTPN18-213ENST00000489215 C3P01024 1663 aa37.16■■■■□ 3.54
PTPN18-213ENST00000489215 TCOF1Q13428 1488 aaKnown RBP37.16■■■■□ 3.54
PTPN18-213ENST00000489215 KIF3BO15066 747 aa37.14■■■■□ 3.54
PTPN18-213ENST00000489215 PREX1Q8TCU6 1659 aa37.12■■■■□ 3.53
PTPN18-213ENST00000489215 ZMYM3Q14202 1370 aa37.11■■■■□ 3.53
PTPN18-213ENST00000489215 SHANK2Q9UPX8 1470 aa37.1■■■■□ 3.53
PTPN18-213ENST00000489215 CLTCQ00610 1675 aaKnown RBP37.07■■■■□ 3.52
PTPN18-213ENST00000489215 ABCC5O15440 1437 aa37.07■■■■□ 3.52
PTPN18-213ENST00000489215 FAM135AQ9P2D6 1515 aa37.06■■■■□ 3.52
PTPN18-213ENST00000489215 DNMT1P26358 1616 aaKnown RBP37.06■■■■□ 3.52
PTPN18-213ENST00000489215 DAPK1P53355 1430 aa37.05■■■■□ 3.52
PTPN18-213ENST00000489215 UHRF1BP1Q6BDS2 1440 aa37.05■■■■□ 3.52
PTPN18-213ENST00000489215 CROCC2H7BZ55 1655 aa37.05■■■■□ 3.52
PTPN18-213ENST00000489215 NPATQ14207 1427 aa37.04■■■■□ 3.52
PTPN18-213ENST00000489215 DUOX2Q9NRD8 1548 aa37■■■■□ 3.51
PTPN18-213ENST00000489215 EIF2AK4Q9P2K8 1649 aaKnown RBP36.99■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms