RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 ZMYM4Q5VZL5 1548 aa27.93■■■□□ 2.06
ATG3-205ENST00000488910 MAGI2Q86UL8 1455 aa27.93■■■□□ 2.06
ATG3-205ENST00000488910 POGZQ7Z3K3 1410 aa27.92■■■□□ 2.06
ATG3-205ENST00000488910 CDC42BPBQ9Y5S2 1711 aa27.9■■■□□ 2.06
ATG3-205ENST00000488910 ARHGEF40Q8TER5 1519 aa27.89■■■□□ 2.06
ATG3-205ENST00000488910 MTUS2Q5JR59 1369 aa27.87■■■□□ 2.05
ATG3-205ENST00000488910 PREX2Q70Z35 1606 aa27.87■■■□□ 2.05
ATG3-205ENST00000488910 ARID4BQ4LE39 1312 aaPredicted RBP27.87■■■□□ 2.05
ATG3-205ENST00000488910 ZFYVE16Q7Z3T8 1539 aa27.86■■■□□ 2.05
ATG3-205ENST00000488910 ZNF518AQ6AHZ1 1483 aa27.84■■■□□ 2.05
ATG3-205ENST00000488910 CDC42BPAQ5VT25 1732 aa27.83■■■□□ 2.05
ATG3-205ENST00000488910 AFAP1Q8N556 730 aa27.82■■■□□ 2.04
ATG3-205ENST00000488910 YEATS2Q9ULM3 1422 aa27.82■■■□□ 2.04
ATG3-205ENST00000488910 GPATCH8Q9UKJ3 1502 aaKnown RBP27.81■■■□□ 2.04
ATG3-205ENST00000488910 ADAMTSL3P82987 1691 aa27.78■■■□□ 2.04
ATG3-205ENST00000488910 CCNB3Q8WWL7 1395 aa27.78■■■□□ 2.04
ATG3-205ENST00000488910 VPS8Q8N3P4 1428 aa27.77■■■□□ 2.04
ATG3-205ENST00000488910 BCORL1Q5H9F3 1711 aa27.77■■■□□ 2.04
ATG3-205ENST00000488910 KDM5CP41229 1560 aa27.77■■■□□ 2.04
ATG3-205ENST00000488910 ATP10AO60312 1499 aa27.76■■■□□ 2.04
ATG3-205ENST00000488910 CFDP1Q9UEE9 299 aaPredicted RBP27.76■■■□□ 2.03
ATG3-205ENST00000488910 ABCC1P33527 1531 aa27.76■■■□□ 2.03
ATG3-205ENST00000488910 EHBP1L1Q8N3D4 1523 aa27.76■■■□□ 2.03
ATG3-205ENST00000488910 ZNF777Q9ULD5 760 aaPredicted RBP27.75■■■□□ 2.03
ATG3-205ENST00000488910 ARHGEF12Q9NZN5 1544 aa27.73■■■□□ 2.03
ATG3-205ENST00000488910 MYT1LQ9UL68 1186 aa27.73■■■□□ 2.03
ATG3-205ENST00000488910 TRAPPC8Q9Y2L5 1435 aa27.72■■■□□ 2.03
ATG3-205ENST00000488910 MLH3Q9UHC1 1453 aa27.71■■■□□ 2.03
ATG3-205ENST00000488910 C9orf84Q5VXU9 1444 aa27.71■■■□□ 2.03
ATG3-205ENST00000488910 ITSN2Q9NZM3 1697 aa27.71■■■□□ 2.03
ATG3-205ENST00000488910 HECW2Q9P2P5 1572 aa27.69■■■□□ 2.02
ATG3-205ENST00000488910 PTPRMP28827 1452 aa27.68■■■□□ 2.02
ATG3-205ENST00000488910 PLEKHH2Q8IVE3 1493 aa27.68■■■□□ 2.02
ATG3-205ENST00000488910 SAMD9LQ8IVG5 1584 aa27.68■■■□□ 2.02
ATG3-205ENST00000488910 KIAA1107Q9UPP5 1409 aa27.67■■■□□ 2.02
ATG3-205ENST00000488910 TIAM1Q13009 1591 aa27.66■■■□□ 2.02
ATG3-205ENST00000488910 SIGLEC1Q9BZZ2 1709 aa27.65■■■□□ 2.02
ATG3-205ENST00000488910 HNRNPMP52272 730 aaKnown RBP eCLIP27.65■■■□□ 2.02
ATG3-205ENST00000488910 MADDQ8WXG6 1647 aa27.65■■■□□ 2.02
ATG3-205ENST00000488910 MAP3K1Q13233 1512 aa27.62■■■□□ 2.01
ATG3-205ENST00000488910 SYCP2Q9BX26 1530 aa27.62■■■□□ 2.01
ATG3-205ENST00000488910 SUPT6HQ7KZ85 1726 aaKnown RBP27.61■■■□□ 2.01
ATG3-205ENST00000488910 MLECQ14165 292 aa27.61■■■□□ 2.01
ATG3-205ENST00000488910 DIP2CQ9Y2E4 1556 aa27.6■■■□□ 2.01
ATG3-205ENST00000488910 NCOA2Q15596 1464 aa27.59■■■□□ 2.01
ATG3-205ENST00000488910 REREQ9P2R6 1566 aa27.59■■■□□ 2.01
ATG3-205ENST00000488910 SPAG9O60271 1321 aaKnown RBP27.59■■■□□ 2.01
ATG3-205ENST00000488910 LRRC9Q6ZRR7 1453 aa27.58■■■□□ 2.01
ATG3-205ENST00000488910 KIDINS220Q9ULH0 1771 aa27.57■■■□□ 2
ATG3-205ENST00000488910 ABCA6Q8N139 1617 aa27.56■■■□□ 2
ATG3-205ENST00000488910 RIMS1Q86UR5 1692 aaKnown RBP27.56■■■□□ 2
ATG3-205ENST00000488910 ZNF644Q9H582 1327 aaPredicted RBP27.56■■■□□ 2
ATG3-205ENST00000488910 AGLP35573 1532 aa27.51■■■□□ 2
ATG3-205ENST00000488910 APLP2Q06481 763 aa27.51■■□□□ 1.99
ATG3-205ENST00000488910 KANK4Q5T7N3 995 aaPredicted RBP27.51■■□□□ 1.99
ATG3-205ENST00000488910 FER1L4A9Z1Z3 1794 aa27.5■■□□□ 1.99
ATG3-205ENST00000488910 MBD5Q9P267 1494 aa27.5■■□□□ 1.99
ATG3-205ENST00000488910 RSPH4AQ5TD94 716 aa27.49■■□□□ 1.99
ATG3-205ENST00000488910 ATP7AQ04656 1500 aa27.47■■□□□ 1.99
ATG3-205ENST00000488910 INO80Q9ULG1 1556 aaPredicted RBP27.44■■□□□ 1.98
ATG3-205ENST00000488910 CAMSAP2Q08AD1 1489 aa27.43■■□□□ 1.98
ATG3-205ENST00000488910 RTEL1-TNFRSF6BF6WH68 1400 aa27.42■■□□□ 1.98
ATG3-205ENST00000488910 PLPPR3Q6T4P5 718 aa27.42■■□□□ 1.98
ATG3-205ENST00000488910 ESF1Q9H501 851 aaKnown RBP27.41■■□□□ 1.98
ATG3-205ENST00000488910 A2MP01023 1474 aa27.39■■□□□ 1.98
ATG3-205ENST00000488910 CCDC141Q6ZP82 1450 aa27.38■■□□□ 1.97
ATG3-205ENST00000488910 MIA2Q96PC5 1412 aa27.37■■□□□ 1.97
ATG3-205ENST00000488910 MYOM3Q5VTT5 1437 aa27.36■■□□□ 1.97
ATG3-205ENST00000488910 TSPY4P0CV99 314 aa27.35■■□□□ 1.97
ATG3-205ENST00000488910 TSPY10P0CW01 314 aa27.35■■□□□ 1.97
ATG3-205ENST00000488910 CEBPAP49715 358 aaPredicted RBP27.35■■□□□ 1.97
ATG3-205ENST00000488910 ADGBQ8N7X0 1667 aa27.34■■□□□ 1.97
ATG3-205ENST00000488910 PLXNC1O60486 1568 aa27.34■■□□□ 1.97
ATG3-205ENST00000488910 ARHGEF5Q12774 1597 aa27.34■■□□□ 1.97
ATG3-205ENST00000488910 CNTLNQ9NXG0 1405 aa27.33■■□□□ 1.97
ATG3-205ENST00000488910 LMTK3Q96Q04 1460 aa27.33■■□□□ 1.97
ATG3-205ENST00000488910 DHX29Q7Z478 1369 aaKnown RBP27.3■■□□□ 1.96
ATG3-205ENST00000488910 PPP6R1Q9UPN7 881 aa27.29■■□□□ 1.96
ATG3-205ENST00000488910 SETD1BQ9UPS6 1966 aaKnown RBP27.29■■□□□ 1.96
ATG3-205ENST00000488910 GGT6Q6P531 493 aa27.26■■□□□ 1.95
ATG3-205ENST00000488910 C3P01024 1663 aa27.24■■□□□ 1.95
ATG3-205ENST00000488910 ZMYM3Q14202 1370 aa27.22■■□□□ 1.95
ATG3-205ENST00000488910 HSPA2P54652 639 aa27.21■■□□□ 1.95
ATG3-205ENST00000488910 MROH2AA6NES4 1674 aa27.21■■□□□ 1.95
ATG3-205ENST00000488910 PREX1Q8TCU6 1659 aa27.21■■□□□ 1.95
ATG3-205ENST00000488910 MAST1Q9Y2H9 1570 aa27.19■■□□□ 1.94
ATG3-205ENST00000488910 KIF3BO15066 747 aa27.19■■□□□ 1.94
ATG3-205ENST00000488910 UHRF1BP1Q6BDS2 1440 aa27.16■■□□□ 1.94
ATG3-205ENST00000488910 PTPN23Q9H3S7 1636 aa27.16■■□□□ 1.94
ATG3-205ENST00000488910 FGD6Q6ZV73 1430 aa27.16■■□□□ 1.94
ATG3-205ENST00000488910 CLTCQ00610 1675 aaKnown RBP27.14■■□□□ 1.94
ATG3-205ENST00000488910 NPATQ14207 1427 aa27.14■■□□□ 1.93
ATG3-205ENST00000488910 TCOF1Q13428 1488 aaKnown RBP27.13■■□□□ 1.93
ATG3-205ENST00000488910 ABCC5O15440 1437 aa27.1■■□□□ 1.93
ATG3-205ENST00000488910 SHANK2Q9UPX8 1470 aa27.08■■□□□ 1.93
ATG3-205ENST00000488910 FAM135AQ9P2D6 1515 aa27.08■■□□□ 1.93
ATG3-205ENST00000488910 WASHC2CQ9Y4E1 1318 aa27.06■■□□□ 1.92
ATG3-205ENST00000488910 DAPK1P53355 1430 aa27.06■■□□□ 1.92
ATG3-205ENST00000488910 PTPRKQ15262 1439 aa27.05■■□□□ 1.92
ATG3-205ENST00000488910 DNMT1P26358 1616 aaKnown RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms