RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 PREX2Q70Z35 1606 aa26.58■■□□□ 1.85
CDK5RAP1-214ENST00000488723 AKNAQ7Z591 1439 aa26.58■■□□□ 1.85
CDK5RAP1-214ENST00000488723 CDC42BPAQ5VT25 1732 aa26.58■■□□□ 1.85
CDK5RAP1-214ENST00000488723 CDC42BPBQ9Y5S2 1711 aa26.57■■□□□ 1.84
CDK5RAP1-214ENST00000488723 ARHGAP5Q13017 1502 aa26.56■■□□□ 1.84
CDK5RAP1-214ENST00000488723 CFDP1Q9UEE9 299 aaPredicted RBP26.55■■□□□ 1.84
CDK5RAP1-214ENST00000488723 KDM6BO15054 1643 aa26.54■■□□□ 1.84
CDK5RAP1-214ENST00000488723 ITSN2Q9NZM3 1697 aa26.52■■□□□ 1.84
CDK5RAP1-214ENST00000488723 COL17A1Q9UMD9 1497 aaPredicted RBP26.51■■□□□ 1.83
CDK5RAP1-214ENST00000488723 ADGRL1O94910 1474 aa26.48■■□□□ 1.83
CDK5RAP1-214ENST00000488723 MIA2Q96PC5 1412 aa26.47■■□□□ 1.83
CDK5RAP1-214ENST00000488723 DENND4BO75064 1496 aaPredicted RBP26.46■■□□□ 1.83
CDK5RAP1-214ENST00000488723 PLEKHH2Q8IVE3 1493 aa26.46■■□□□ 1.83
CDK5RAP1-214ENST00000488723 MYOM3Q5VTT5 1437 aa26.46■■□□□ 1.83
CDK5RAP1-214ENST00000488723 SCAPERQ9BY12 1400 aa26.46■■□□□ 1.83
CDK5RAP1-214ENST00000488723 KIAA1107Q9UPP5 1409 aa26.45■■□□□ 1.82
CDK5RAP1-214ENST00000488723 ZNF777Q9ULD5 760 aaPredicted RBP26.41■■□□□ 1.82
CDK5RAP1-214ENST00000488723 RAPGEF3O95398 923 aa26.4■■□□□ 1.82
CDK5RAP1-214ENST00000488723 ABCC1P33527 1531 aa26.39■■□□□ 1.82
CDK5RAP1-214ENST00000488723 SAMD9LQ8IVG5 1584 aa26.39■■□□□ 1.82
CDK5RAP1-214ENST00000488723 RSPH4AQ5TD94 716 aa26.39■■□□□ 1.82
CDK5RAP1-214ENST00000488723 POGZQ7Z3K3 1410 aa26.38■■□□□ 1.81
CDK5RAP1-214ENST00000488723 RICTORQ6R327 1708 aa26.36■■□□□ 1.81
CDK5RAP1-214ENST00000488723 ZNF518AQ6AHZ1 1483 aa26.36■■□□□ 1.81
CDK5RAP1-214ENST00000488723 ARHGEF12Q9NZN5 1544 aa26.34■■□□□ 1.81
CDK5RAP1-214ENST00000488723 ZNF644Q9H582 1327 aaPredicted RBP26.34■■□□□ 1.81
CDK5RAP1-214ENST00000488723 MAGI2Q86UL8 1455 aa26.33■■□□□ 1.81
CDK5RAP1-214ENST00000488723 FGD6Q6ZV73 1430 aa26.32■■□□□ 1.8
CDK5RAP1-214ENST00000488723 ZMYM4Q5VZL5 1548 aa26.32■■□□□ 1.8
CDK5RAP1-214ENST00000488723 FRMPD1Q5SYB0 1578 aa26.32■■□□□ 1.8
CDK5RAP1-214ENST00000488723 CAMSAP2Q08AD1 1489 aa26.31■■□□□ 1.8
CDK5RAP1-214ENST00000488723 HNRNPMP52272 730 aaKnown RBP eCLIP26.31■■□□□ 1.8
CDK5RAP1-214ENST00000488723 AFAP1Q8N556 730 aa26.31■■□□□ 1.8
CDK5RAP1-214ENST00000488723 MBD5Q9P267 1494 aa26.3■■□□□ 1.8
CDK5RAP1-214ENST00000488723 TRAPPC8Q9Y2L5 1435 aa26.3■■□□□ 1.8
CDK5RAP1-214ENST00000488723 SYCP2Q9BX26 1530 aa26.29■■□□□ 1.8
CDK5RAP1-214ENST00000488723 KDM5CP41229 1560 aa26.29■■□□□ 1.8
CDK5RAP1-214ENST00000488723 TCOF1Q13428 1488 aaKnown RBP26.26■■□□□ 1.79
CDK5RAP1-214ENST00000488723 MLH3Q9UHC1 1453 aa26.26■■□□□ 1.79
CDK5RAP1-214ENST00000488723 PPARGC1BQ86YN6 1023 aaKnown RBP26.26■■□□□ 1.79
CDK5RAP1-214ENST00000488723 PTPN23Q9H3S7 1636 aa26.25■■□□□ 1.79
CDK5RAP1-214ENST00000488723 ARHGEF5Q12774 1597 aa26.24■■□□□ 1.79
CDK5RAP1-214ENST00000488723 CCDC141Q6ZP82 1450 aa26.22■■□□□ 1.79
CDK5RAP1-214ENST00000488723 SPAG9O60271 1321 aaKnown RBP26.21■■□□□ 1.79
CDK5RAP1-214ENST00000488723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.2■■□□□ 1.79
CDK5RAP1-214ENST00000488723 TSPY4P0CV99 314 aa26.2■■□□□ 1.78
CDK5RAP1-214ENST00000488723 TSPY10P0CW01 314 aa26.2■■□□□ 1.78
CDK5RAP1-214ENST00000488723 RTEL1-TNFRSF6BF6WH68 1400 aa26.2■■□□□ 1.78
CDK5RAP1-214ENST00000488723 HECW2Q9P2P5 1572 aa26.19■■□□□ 1.78
CDK5RAP1-214ENST00000488723 ZFYVE16Q7Z3T8 1539 aa26.19■■□□□ 1.78
CDK5RAP1-214ENST00000488723 ARHGEF40Q8TER5 1519 aa26.15■■□□□ 1.78
CDK5RAP1-214ENST00000488723 MYT1LQ9UL68 1186 aa26.14■■□□□ 1.78
CDK5RAP1-214ENST00000488723 ATP10AO60312 1499 aa26.14■■□□□ 1.78
CDK5RAP1-214ENST00000488723 RRBP1Q9P2E9 1410 aaKnown RBP26.14■■□□□ 1.77
CDK5RAP1-214ENST00000488723 YEATS2Q9ULM3 1422 aa26.14■■□□□ 1.77
CDK5RAP1-214ENST00000488723 KIDINS220Q9ULH0 1771 aa26.12■■□□□ 1.77
CDK5RAP1-214ENST00000488723 FAM50AQ14320 339 aaKnown RBP26.12■■□□□ 1.77
CDK5RAP1-214ENST00000488723 ATP7AQ04656 1500 aa26.11■■□□□ 1.77
CDK5RAP1-214ENST00000488723 ABCC5O15440 1437 aa26.11■■□□□ 1.77
CDK5RAP1-214ENST00000488723 INO80Q9ULG1 1556 aaPredicted RBP26.11■■□□□ 1.77
CDK5RAP1-214ENST00000488723 MAST1Q9Y2H9 1570 aa26.1■■□□□ 1.77
CDK5RAP1-214ENST00000488723 SHANK2Q9UPX8 1470 aa26.1■■□□□ 1.77
CDK5RAP1-214ENST00000488723 DNMT1P26358 1616 aaKnown RBP26.1■■□□□ 1.77
CDK5RAP1-214ENST00000488723 DAPK1P53355 1430 aa26.09■■□□□ 1.77
CDK5RAP1-214ENST00000488723 REREQ9P2R6 1566 aa26.07■■□□□ 1.76
CDK5RAP1-214ENST00000488723 C9orf84Q5VXU9 1444 aa26.07■■□□□ 1.76
CDK5RAP1-214ENST00000488723 DIP2CQ9Y2E4 1556 aa26.06■■□□□ 1.76
CDK5RAP1-214ENST00000488723 ABCA6Q8N139 1617 aa26.03■■□□□ 1.76
CDK5RAP1-214ENST00000488723 CROCC2H7BZ55 1655 aa26.02■■□□□ 1.76
CDK5RAP1-214ENST00000488723 ADGBQ8N7X0 1667 aa26■■□□□ 1.75
CDK5RAP1-214ENST00000488723 AGLP35573 1532 aa25.99■■□□□ 1.75
CDK5RAP1-214ENST00000488723 DHX29Q7Z478 1369 aaKnown RBP25.99■■□□□ 1.75
CDK5RAP1-214ENST00000488723 A2MP01023 1474 aa25.98■■□□□ 1.75
CDK5RAP1-214ENST00000488723 PLXNC1O60486 1568 aa25.98■■□□□ 1.75
CDK5RAP1-214ENST00000488723 ANKRD30AQ9BXX3 1397 aa25.97■■□□□ 1.75
CDK5RAP1-214ENST00000488723 ARID4BQ4LE39 1312 aaPredicted RBP25.97■■□□□ 1.75
CDK5RAP1-214ENST00000488723 ADGRL2O95490 1459 aa25.96■■□□□ 1.75
CDK5RAP1-214ENST00000488723 NCOA1Q15788 1441 aa25.95■■□□□ 1.74
CDK5RAP1-214ENST00000488723 ROCK1Q13464 1354 aa25.94■■□□□ 1.74
CDK5RAP1-214ENST00000488723 PTPRKQ15262 1439 aa25.91■■□□□ 1.74
CDK5RAP1-214ENST00000488723 CHIC2Q9UKJ5 165 aa25.91■■□□□ 1.74
CDK5RAP1-214ENST00000488723 DUOX2Q9NRD8 1548 aa25.9■■□□□ 1.74
CDK5RAP1-214ENST00000488723 KIF15Q9NS87 1388 aa25.9■■□□□ 1.74
CDK5RAP1-214ENST00000488723 SIGLEC1Q9BZZ2 1709 aa25.88■■□□□ 1.73
CDK5RAP1-214ENST00000488723 RRP7BPQ9NSQ0 103 aa25.88■■□□□ 1.73
CDK5RAP1-214ENST00000488723 PPP6R1Q9UPN7 881 aa25.88■■□□□ 1.73
CDK5RAP1-214ENST00000488723 BCORL1Q5H9F3 1711 aa25.88■■□□□ 1.73
CDK5RAP1-214ENST00000488723 ITGAEP38570 1179 aa25.85■■□□□ 1.73
CDK5RAP1-214ENST00000488723 KDM4FA0A1W2PPD8 638 aa25.84■■□□□ 1.73
CDK5RAP1-214ENST00000488723 ERBINQ96RT1 1412 aa25.84■■□□□ 1.73
CDK5RAP1-214ENST00000488723 ADAMTSL3P82987 1691 aa25.83■■□□□ 1.73
CDK5RAP1-214ENST00000488723 EIF2AK4Q9P2K8 1649 aaKnown RBP25.82■■□□□ 1.72
CDK5RAP1-214ENST00000488723 KIF3BO15066 747 aa25.81■■□□□ 1.72
CDK5RAP1-214ENST00000488723 MLECQ14165 292 aa25.79■■□□□ 1.72
CDK5RAP1-214ENST00000488723 ANKRD50Q9ULJ7 1429 aa25.77■■□□□ 1.72
CDK5RAP1-214ENST00000488723 GGT6Q6P531 493 aa25.76■■□□□ 1.71
CDK5RAP1-214ENST00000488723 FAM135AQ9P2D6 1515 aa25.75■■□□□ 1.71
CDK5RAP1-214ENST00000488723 CNTLNQ9NXG0 1405 aa25.74■■□□□ 1.71
CDK5RAP1-214ENST00000488723 ESF1Q9H501 851 aaKnown RBP25.74■■□□□ 1.71
CDK5RAP1-214ENST00000488723 RNF17Q9BXT8 1623 aaKnown RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms