RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PHF8Q9UPP1 1060 aa10.77□□□□□ -0.69
CDHR3-213ENST00000488386 MKRN3Q13064 507 aaKnown RBP10.76□□□□□ -0.69
CDHR3-213ENST00000488386 POTEFA5A3E0 1075 aa10.74□□□□□ -0.69
CDHR3-213ENST00000488386 IRX5P78411 483 aaPredicted RBP10.74□□□□□ -0.69
CDHR3-213ENST00000488386 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
CDHR3-213ENST00000488386 MS4A4AQ96JQ5 239 aa10.74□□□□□ -0.69
CDHR3-213ENST00000488386 SUPT5HO00267 1087 aaKnown RBP10.73□□□□□ -0.69
CDHR3-213ENST00000488386 COLQQ9Y215 455 aaPredicted RBP10.73□□□□□ -0.69
CDHR3-213ENST00000488386 SOX12O15370 315 aa10.72□□□□□ -0.69
CDHR3-213ENST00000488386 GTPBP6O43824 516 aaPredicted RBP10.72□□□□□ -0.69
CDHR3-213ENST00000488386 IER5LQ5T953 404 aa10.72□□□□□ -0.69
CDHR3-213ENST00000488386 ILDR1Q86SU0 546 aaPredicted RBP10.72□□□□□ -0.69
CDHR3-213ENST00000488386 METRNQ9UJH8 293 aa10.72□□□□□ -0.69
CDHR3-213ENST00000488386 PDCD7Q8N8D1 485 aaKnown RBP10.71□□□□□ -0.69
CDHR3-213ENST00000488386 SLC39A7Q92504 469 aa10.71□□□□□ -0.69
CDHR3-213ENST00000488386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.71□□□□□ -0.694e-10■■□□□ 12.5
CDHR3-213ENST00000488386 PAXIP1Q6ZW49 1069 aaPredicted RBP10.7□□□□□ -0.7
CDHR3-213ENST00000488386 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
CDHR3-213ENST00000488386 TOPBP1Q92547 1522 aa10.68□□□□□ -0.7
CDHR3-213ENST00000488386 C7P10643 843 aa10.68□□□□□ -0.7
CDHR3-213ENST00000488386 NLRP6P59044 892 aa10.68□□□□□ -0.7
CDHR3-213ENST00000488386 DPY19L2Q6NUT2 758 aa10.68□□□□□ -0.7
CDHR3-213ENST00000488386 CFAP44Q96MT7 982 aa10.67□□□□□ -0.7
CDHR3-213ENST00000488386 ZNF608Q9ULD9 1512 aaPredicted RBP10.67□□□□□ -0.7
CDHR3-213ENST00000488386 PPP1R37O75864 691 aa10.66□□□□□ -0.7
CDHR3-213ENST00000488386 PLCB2Q00722 1185 aa10.66□□□□□ -0.7
CDHR3-213ENST00000488386 PLCG2P16885 1265 aa10.65□□□□□ -0.7
CDHR3-213ENST00000488386 SPRYD3Q8NCJ5 442 aa10.65□□□□□ -0.7
CDHR3-213ENST00000488386 OCEL1Q9H607 264 aa10.65□□□□□ -0.7
CDHR3-213ENST00000488386 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.71
CDHR3-213ENST00000488386 SEC24BO95487 1268 aa10.63□□□□□ -0.71
CDHR3-213ENST00000488386 IFT140Q96RY7 1462 aa10.61□□□□□ -0.71
CDHR3-213ENST00000488386 POTEB2H3BUK9 544 aa10.6□□□□□ -0.71
CDHR3-213ENST00000488386 RAD54L2Q9Y4B4 1467 aa10.6□□□□□ -0.71
CDHR3-213ENST00000488386 EIF4G3O43432 1585 aaKnown RBP10.6□□□□□ -0.71
CDHR3-213ENST00000488386 POLA1P09884 1462 aaPredicted RBP10.59□□□□□ -0.71
CDHR3-213ENST00000488386 TARBP1Q13395 1621 aaKnown RBP10.58□□□□□ -0.72
CDHR3-213ENST00000488386 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
CDHR3-213ENST00000488386 AQRO60306 1485 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDHR3-213ENST00000488386 RYDENQ9NUL5 291 aaKnown RBP10.58□□□□□ -0.72
CDHR3-213ENST00000488386 POTEJP0CG39 1038 aa10.57□□□□□ -0.72
CDHR3-213ENST00000488386 CUX1P39880 1505 aa10.57□□□□□ -0.72
CDHR3-213ENST00000488386 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
CDHR3-213ENST00000488386 MICALL2Q8IY33 904 aa10.54□□□□□ -0.72
CDHR3-213ENST00000488386 TDRD9Q8NDG6 1382 aaKnown RBP10.53□□□□□ -0.72
CDHR3-213ENST00000488386 SOGA1O94964 1423 aa10.53□□□□□ -0.72
CDHR3-213ENST00000488386 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
CDHR3-213ENST00000488386 CHD1O14646 1710 aa10.53□□□□□ -0.72
CDHR3-213ENST00000488386 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
CDHR3-213ENST00000488386 BOLA1Q9Y3E2 137 aa10.52□□□□□ -0.73
CDHR3-213ENST00000488386 TMEM121BQ9BXQ6 578 aaPredicted RBP10.51□□□□□ -0.73
CDHR3-213ENST00000488386 HAP1P54257 671 aaPredicted RBP10.49□□□□□ -0.73
CDHR3-213ENST00000488386 L3MBTL3Q96JM7 780 aaPredicted RBP10.48□□□□□ -0.73
CDHR3-213ENST00000488386 WDR97A6NE52 1622 aa10.47□□□□□ -0.73
CDHR3-213ENST00000488386 SNAPC4Q5SXM2 1469 aa10.47□□□□□ -0.73
CDHR3-213ENST00000488386 RIMBP3CA6NJZ7 1639 aa10.47□□□□□ -0.73
CDHR3-213ENST00000488386 RIMBP3BA6NNM3 1639 aa10.47□□□□□ -0.73
CDHR3-213ENST00000488386 RIMBP3Q9UFD9 1639 aa10.47□□□□□ -0.73
CDHR3-213ENST00000488386 SYNJ1O43426 1573 aa10.45□□□□□ -0.74
CDHR3-213ENST00000488386 TMEM92Q6UXU6 159 aa10.44□□□□□ -0.74
CDHR3-213ENST00000488386 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
CDHR3-213ENST00000488386 G3V3G9 751 aa10.43□□□□□ -0.74
CDHR3-213ENST00000488386 ARHGEF11O15085 1522 aa10.43□□□□□ -0.74
CDHR3-213ENST00000488386 LHX8Q68G74 356 aa10.42□□□□□ -0.74
CDHR3-213ENST00000488386 BIVM-ERCC5R4GMW8 1640 aa10.41□□□□□ -0.74
CDHR3-213ENST00000488386 NCKAP5LQ9HCH0 1330 aa10.41□□□□□ -0.74
CDHR3-213ENST00000488386 WRNQ14191 1432 aaPredicted RBP eCLIP10.41□□□□□ -0.74
CDHR3-213ENST00000488386 ABCA5Q8WWZ7 1642 aa10.4□□□□□ -0.74
CDHR3-213ENST00000488386 C3orf67Q6ZVT6 689 aa10.4□□□□□ -0.74
CDHR3-213ENST00000488386 GRIN2BQ13224 1484 aa10.4□□□□□ -0.74
CDHR3-213ENST00000488386 GAPVD1Q14C86 1478 aa10.4□□□□□ -0.74
CDHR3-213ENST00000488386 TOP2BQ02880 1626 aa10.4□□□□□ -0.75
CDHR3-213ENST00000488386 ABCA10Q8WWZ4 1543 aa10.39□□□□□ -0.75
CDHR3-213ENST00000488386 CHMP7Q8WUX9 453 aaPredicted RBP10.38□□□□□ -0.75
CDHR3-213ENST00000488386 OTUD5Q96G74 571 aa10.38□□□□□ -0.75
CDHR3-213ENST00000488386 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
CDHR3-213ENST00000488386 MAGI1Q96QZ7 1491 aaPredicted RBP10.37□□□□□ -0.75
CDHR3-213ENST00000488386 SLC24A1O60721 1099 aa10.37□□□□□ -0.75
CDHR3-213ENST00000488386 KDM2AQ9Y2K7 1162 aa10.37□□□□□ -0.75
CDHR3-213ENST00000488386 KIF3CO14782 793 aa10.36□□□□□ -0.75
CDHR3-213ENST00000488386 CYB5RLQ6IPT4 315 aa10.36□□□□□ -0.75
CDHR3-213ENST00000488386 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.36□□□□□ -0.75
CDHR3-213ENST00000488386 CLASP1Q7Z460 1538 aa10.35□□□□□ -0.75
CDHR3-213ENST00000488386 C2orf72A6NCS6 295 aa10.35□□□□□ -0.75
CDHR3-213ENST00000488386 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
CDHR3-213ENST00000488386 SCUBE2Q9NQ36 999 aa10.34□□□□□ -0.75
CDHR3-213ENST00000488386 ARAP1Q96P48 1450 aa10.34□□□□□ -0.75
CDHR3-213ENST00000488386 ADAMTS12P58397 1594 aa10.32□□□□□ -0.76
CDHR3-213ENST00000488386 MAMSTRQ6ZN01 415 aa10.32□□□□□ -0.76
CDHR3-213ENST00000488386 GPHNQ9NQX3 736 aaPredicted RBP10.32□□□□□ -0.76
CDHR3-213ENST00000488386 SLAIN1Q8ND83 568 aa10.31□□□□□ -0.76
CDHR3-213ENST00000488386 TMC2Q8TDI7 906 aa10.31□□□□□ -0.76
CDHR3-213ENST00000488386 LARP6Q9BRS8 491 aaKnown RBP10.31□□□□□ -0.76
CDHR3-213ENST00000488386 DSG2Q14126 1118 aa10.3□□□□□ -0.76
CDHR3-213ENST00000488386 MFSD10Q14728 455 aa10.3□□□□□ -0.76
CDHR3-213ENST00000488386 PDE4AP27815 886 aa10.29□□□□□ -0.76
CDHR3-213ENST00000488386 CEP170Q5SW79 1584 aa10.29□□□□□ -0.76
CDHR3-213ENST00000488386 GRIN2AQ12879 1464 aa10.29□□□□□ -0.76
CDHR3-213ENST00000488386 ERCC6L2Q5T890 1561 aa10.28□□□□□ -0.76
CDHR3-213ENST00000488386 VSIG10Q8N0Z9 540 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms