RNA–Protein interactions for RNA: ENST00000488198.5

CSF1-206, Transcript of colony stimulating factor 1, humanhuman

TSL 3

Gene CSF1, Length 1,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-206ENST00000488198 GPATCH8Q9UKJ3 1502 aaKnown RBP27.54■■■□□ 2
CSF1-206ENST00000488198 DENND4BO75064 1496 aaPredicted RBP27.52■■■□□ 2
CSF1-206ENST00000488198 ADGRL1O94910 1474 aa27.52■■■□□ 2
CSF1-206ENST00000488198 KANK4Q5T7N3 995 aaPredicted RBP27.52■■■□□ 2
CSF1-206ENST00000488198 PREX2Q70Z35 1606 aa27.52■■■□□ 2
CSF1-206ENST00000488198 NCOA2Q15596 1464 aa27.51■■■□□ 2
CSF1-206ENST00000488198 SUPT6HQ7KZ85 1726 aaKnown RBP27.51■■□□□ 1.99
CSF1-206ENST00000488198 CFDP1Q9UEE9 299 aaPredicted RBP27.51■■□□□ 1.99
CSF1-206ENST00000488198 SCAPERQ9BY12 1400 aa27.48■■□□□ 1.99
CSF1-206ENST00000488198 RAPGEF3O95398 923 aa27.46■■□□□ 1.99
CSF1-206ENST00000488198 ZNF777Q9ULD5 760 aaPredicted RBP27.44■■□□□ 1.98
CSF1-206ENST00000488198 CDC42BPAQ5VT25 1732 aa27.43■■□□□ 1.98
CSF1-206ENST00000488198 CDC42BPBQ9Y5S2 1711 aa27.43■■□□□ 1.98
CSF1-206ENST00000488198 PLEKHH2Q8IVE3 1493 aa27.43■■□□□ 1.98
CSF1-206ENST00000488198 POGZQ7Z3K3 1410 aa27.41■■□□□ 1.98
CSF1-206ENST00000488198 ITSN2Q9NZM3 1697 aa27.41■■□□□ 1.98
CSF1-206ENST00000488198 ZNF518AQ6AHZ1 1483 aa27.38■■□□□ 1.97
CSF1-206ENST00000488198 KIAA1107Q9UPP5 1409 aa27.38■■□□□ 1.97
CSF1-206ENST00000488198 ABCC1P33527 1531 aa27.36■■□□□ 1.97
CSF1-206ENST00000488198 MAGI2Q86UL8 1455 aa27.35■■□□□ 1.97
CSF1-206ENST00000488198 FRMPD1Q5SYB0 1578 aa27.35■■□□□ 1.97
CSF1-206ENST00000488198 MYOM3Q5VTT5 1437 aa27.34■■□□□ 1.97
CSF1-206ENST00000488198 MIA2Q96PC5 1412 aa27.33■■□□□ 1.97
CSF1-206ENST00000488198 ZMYM4Q5VZL5 1548 aa27.33■■□□□ 1.97
CSF1-206ENST00000488198 SAMD9LQ8IVG5 1584 aa27.32■■□□□ 1.96
CSF1-206ENST00000488198 RICTORQ6R327 1708 aa27.31■■□□□ 1.96
CSF1-206ENST00000488198 AFAP1Q8N556 730 aa27.3■■□□□ 1.96
CSF1-206ENST00000488198 RSPH4AQ5TD94 716 aa27.29■■□□□ 1.96
CSF1-206ENST00000488198 ARHGEF12Q9NZN5 1544 aa27.29■■□□□ 1.96
CSF1-206ENST00000488198 SYCP2Q9BX26 1530 aa27.27■■□□□ 1.96
CSF1-206ENST00000488198 TRAPPC8Q9Y2L5 1435 aa27.27■■□□□ 1.96
CSF1-206ENST00000488198 HNRNPMP52272 730 aaKnown RBP eCLIP27.27■■□□□ 1.96
CSF1-206ENST00000488198 KDM5CP41229 1560 aa27.26■■□□□ 1.96
CSF1-206ENST00000488198 ZNF644Q9H582 1327 aaPredicted RBP27.26■■□□□ 1.95
CSF1-206ENST00000488198 MYT1LQ9UL68 1186 aa27.26■■□□□ 1.95
CSF1-206ENST00000488198 CAMSAP2Q08AD1 1489 aa27.25■■□□□ 1.95
CSF1-206ENST00000488198 AEBP2Q6ZN18 517 aaPredicted RBP27.24■■□□□ 1.95
CSF1-206ENST00000488198 ZFYVE16Q7Z3T8 1539 aa27.24■■□□□ 1.95
CSF1-206ENST00000488198 MLH3Q9UHC1 1453 aa27.23■■□□□ 1.95
CSF1-206ENST00000488198 ARHGEF40Q8TER5 1519 aa27.21■■□□□ 1.95
CSF1-206ENST00000488198 MBD5Q9P267 1494 aa27.21■■□□□ 1.95
CSF1-206ENST00000488198 SPAG9O60271 1321 aaKnown RBP27.2■■□□□ 1.95
CSF1-206ENST00000488198 FGD6Q6ZV73 1430 aa27.19■■□□□ 1.94
CSF1-206ENST00000488198 HECW2Q9P2P5 1572 aa27.18■■□□□ 1.94
CSF1-206ENST00000488198 YEATS2Q9ULM3 1422 aa27.18■■□□□ 1.94
CSF1-206ENST00000488198 ATP10AO60312 1499 aa27.16■■□□□ 1.94
CSF1-206ENST00000488198 CCDC141Q6ZP82 1450 aa27.16■■□□□ 1.94
CSF1-206ENST00000488198 TSPY4P0CV99 314 aa27.15■■□□□ 1.94
CSF1-206ENST00000488198 TSPY10P0CW01 314 aa27.15■■□□□ 1.94
CSF1-206ENST00000488198 ARHGEF5Q12774 1597 aa27.14■■□□□ 1.93
CSF1-206ENST00000488198 C9orf84Q5VXU9 1444 aa27.13■■□□□ 1.93
CSF1-206ENST00000488198 RTEL1-TNFRSF6BF6WH68 1400 aa27.12■■□□□ 1.93
CSF1-206ENST00000488198 ARID4BQ4LE39 1312 aaPredicted RBP27.12■■□□□ 1.93
CSF1-206ENST00000488198 TCOF1Q13428 1488 aaKnown RBP27.12■■□□□ 1.93
CSF1-206ENST00000488198 PTPN23Q9H3S7 1636 aa27.1■■□□□ 1.93
CSF1-206ENST00000488198 PPARGC1BQ86YN6 1023 aaKnown RBP27.1■■□□□ 1.93
CSF1-206ENST00000488198 ATP7AQ04656 1500 aa27.09■■□□□ 1.93
CSF1-206ENST00000488198 DIP2CQ9Y2E4 1556 aa27.05■■□□□ 1.92
CSF1-206ENST00000488198 INO80Q9ULG1 1556 aaPredicted RBP27.05■■□□□ 1.92
CSF1-206ENST00000488198 REREQ9P2R6 1566 aa27.04■■□□□ 1.92
CSF1-206ENST00000488198 FAM50AQ14320 339 aaKnown RBP27.03■■□□□ 1.92
CSF1-206ENST00000488198 KIDINS220Q9ULH0 1771 aa27.03■■□□□ 1.92
CSF1-206ENST00000488198 ABCA6Q8N139 1617 aa27.01■■□□□ 1.92
CSF1-206ENST00000488198 KDM4FA0A1W2PPD8 638 aa26.99■■□□□ 1.91
CSF1-206ENST00000488198 SHANK2Q9UPX8 1470 aa26.99■■□□□ 1.91
CSF1-206ENST00000488198 ABCC5O15440 1437 aa26.98■■□□□ 1.91
CSF1-206ENST00000488198 DAPK1P53355 1430 aa26.98■■□□□ 1.91
CSF1-206ENST00000488198 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.97■■□□□ 1.911e-6■■■■■ 32.9
CSF1-206ENST00000488198 MAST1Q9Y2H9 1570 aa26.97■■□□□ 1.91
CSF1-206ENST00000488198 AGLP35573 1532 aa26.97■■□□□ 1.91
CSF1-206ENST00000488198 A2MP01023 1474 aa26.97■■□□□ 1.91
CSF1-206ENST00000488198 DNMT1P26358 1616 aaKnown RBP26.94■■□□□ 1.9
CSF1-206ENST00000488198 DHX29Q7Z478 1369 aaKnown RBP26.93■■□□□ 1.9
CSF1-206ENST00000488198 RRBP1Q9P2E9 1410 aaKnown RBP26.9■■□□□ 1.9
CSF1-206ENST00000488198 ADGBQ8N7X0 1667 aa26.9■■□□□ 1.9
CSF1-206ENST00000488198 MLECQ14165 292 aa26.9■■□□□ 1.9
CSF1-206ENST00000488198 BCORL1Q5H9F3 1711 aa26.9■■□□□ 1.9
CSF1-206ENST00000488198 PLXNC1O60486 1568 aa26.88■■□□□ 1.89
CSF1-206ENST00000488198 ANKRD30AQ9BXX3 1397 aa26.88■■□□□ 1.89
CSF1-206ENST00000488198 CROCC2H7BZ55 1655 aa26.85■■□□□ 1.89
CSF1-206ENST00000488198 ADAMTSL3P82987 1691 aa26.85■■□□□ 1.89
CSF1-206ENST00000488198 ESF1Q9H501 851 aaKnown RBP26.84■■□□□ 1.89
CSF1-206ENST00000488198 SIGLEC1Q9BZZ2 1709 aa26.84■■□□□ 1.89
CSF1-206ENST00000488198 KIF15Q9NS87 1388 aa26.84■■□□□ 1.89
CSF1-206ENST00000488198 CHIC2Q9UKJ5 165 aa26.83■■□□□ 1.89
CSF1-206ENST00000488198 PPP6R1Q9UPN7 881 aa26.83■■□□□ 1.89
CSF1-206ENST00000488198 DUOX2Q9NRD8 1548 aa26.81■■□□□ 1.88
CSF1-206ENST00000488198 RRP7BPQ9NSQ0 103 aa26.81■■□□□ 1.88
CSF1-206ENST00000488198 ADGRL2O95490 1459 aa26.81■■□□□ 1.88
CSF1-206ENST00000488198 NCOA1Q15788 1441 aa26.8■■□□□ 1.88
CSF1-206ENST00000488198 KIF3BO15066 747 aa26.79■■□□□ 1.88
CSF1-206ENST00000488198 MADDQ8WXG6 1647 aa26.77■■□□□ 1.88
CSF1-206ENST00000488198 ERBINQ96RT1 1412 aa26.77■■□□□ 1.88
CSF1-206ENST00000488198 CNTLNQ9NXG0 1405 aa26.77■■□□□ 1.88
CSF1-206ENST00000488198 ROCK1Q13464 1354 aa26.77■■□□□ 1.88
CSF1-206ENST00000488198 GGT6Q6P531 493 aa26.77■■□□□ 1.88
CSF1-206ENST00000488198 ITGAEP38570 1179 aa26.76■■□□□ 1.87
CSF1-206ENST00000488198 PTPRMP28827 1452 aa26.75■■□□□ 1.87
CSF1-206ENST00000488198 PTPRKQ15262 1439 aa26.73■■□□□ 1.87
CSF1-206ENST00000488198 EIF2AK4Q9P2K8 1649 aaKnown RBP26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms