RNA–Protein interactions for RNA: ENST00000488198.5

CSF1-206, Transcript of colony stimulating factor 1, humanhuman

TSL 3

Gene CSF1, Length 1,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-206ENST00000488198 NISCHQ9Y2I1 1504 aa42.28■■■■■ 4.36
CSF1-206ENST00000488198 CCDC180Q9P1Z9 1646 aa37.48■■■■□ 3.59
CSF1-206ENST00000488198 ABCC9O60706 1549 aa36.48■■■■□ 3.43
CSF1-206ENST00000488198 DCAF8L2P0C7V8 631 aa35.29■■■■□ 3.24
CSF1-206ENST00000488198 ZCCHC6Q5VYS8 1495 aaKnown RBP35.26■■■■□ 3.23
CSF1-206ENST00000488198 NACADO15069 1562 aa35.25■■■■□ 3.23
CSF1-206ENST00000488198 RB1CC1Q8TDY2 1594 aa35.24■■■■□ 3.23
CSF1-206ENST00000488198 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
CSF1-206ENST00000488198 DCAF1Q9Y4B6 1507 aa35.05■■■■□ 3.2
CSF1-206ENST00000488198 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
CSF1-206ENST00000488198 SCRIBQ14160 1630 aa34.17■■■■□ 3.06
CSF1-206ENST00000488198 PABPN1Q86U42 306 aaKnown RBP eCLIP34.14■■■■□ 3.06
CSF1-206ENST00000488198 BICRAQ9NZM4 1560 aa34.04■■■■□ 3.04
CSF1-206ENST00000488198 SHROOM4Q9ULL8 1493 aa33.92■■■■□ 3.02
CSF1-206ENST00000488198 DNAJC5BQ9UF47 199 aa33.28■■■□□ 2.92
CSF1-206ENST00000488198 EIF4G1Q04637 1599 aaKnown RBP33.2■■■□□ 2.91
CSF1-206ENST00000488198 CC2D2AQ9P2K1 1620 aa32.98■■■□□ 2.87
CSF1-206ENST00000488198 CECR2Q9BXF3 1484 aa32.86■■■□□ 2.85
CSF1-206ENST00000488198 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
CSF1-206ENST00000488198 SMARCA4P51532 1647 aa32.72■■■□□ 2.83
CSF1-206ENST00000488198 SMARCA2P51531 1590 aa32.56■■■□□ 2.8
CSF1-206ENST00000488198 NCAPD3P42695 1498 aa32.54■■■□□ 2.8
CSF1-206ENST00000488198 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
CSF1-206ENST00000488198 MROH2BQ7Z745 1585 aa32.53■■■□□ 2.8
CSF1-206ENST00000488198 PEG3Q9GZU2 1588 aa32.45■■■□□ 2.78
CSF1-206ENST00000488198 HMGXB3Q12766 1538 aa32.38■■■□□ 2.77
CSF1-206ENST00000488198 BAZ1BQ9UIG0 1483 aaKnown RBP32.32■■■□□ 2.76
CSF1-206ENST00000488198 RSF1Q96T23 1441 aaPredicted RBP32.29■■■□□ 2.76
CSF1-206ENST00000488198 WIZO95785 1651 aa32.14■■■□□ 2.74
CSF1-206ENST00000488198 TOP2AP11388 1531 aaKnown RBP31.92■■■□□ 2.7
CSF1-206ENST00000488198 LAMC3Q9Y6N6 1575 aa31.63■■■□□ 2.65
CSF1-206ENST00000488198 SUPT5HO00267 1087 aaKnown RBP31.62■■■□□ 2.65
CSF1-206ENST00000488198 CADPSQ9ULU8 1353 aa31.62■■■□□ 2.65
CSF1-206ENST00000488198 NESP48681 1621 aa31.57■■■□□ 2.64
CSF1-206ENST00000488198 CCDC88BA6NC98 1476 aa31.52■■■□□ 2.64
CSF1-206ENST00000488198 ERCC6Q03468 1493 aa31.51■■■□□ 2.63
CSF1-206ENST00000488198 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
CSF1-206ENST00000488198 CFTRP13569 1480 aa31.45■■■□□ 2.62
CSF1-206ENST00000488198 FANCD2Q9BXW9 1451 aa31.21■■■□□ 2.59
CSF1-206ENST00000488198 CEP164Q9UPV0 1460 aa31.17■■■□□ 2.58
CSF1-206ENST00000488198 KIF21AQ7Z4S6 1674 aa31.15■■■□□ 2.58
CSF1-206ENST00000488198 CUX2O14529 1486 aa31.12■■■□□ 2.57
CSF1-206ENST00000488198 MRC2Q9UBG0 1479 aa31.09■■■□□ 2.57
CSF1-206ENST00000488198 THOC2Q8NI27 1593 aaKnown RBP31.06■■■□□ 2.56
CSF1-206ENST00000488198 PRDM2Q13029 1718 aa31.06■■■□□ 2.56
CSF1-206ENST00000488198 WDR62O43379 1518 aa30.95■■■□□ 2.55
CSF1-206ENST00000488198 ABCC8Q09428 1581 aa30.83■■■□□ 2.53
CSF1-206ENST00000488198 URB2Q14146 1524 aaKnown RBP30.83■■■□□ 2.53
CSF1-206ENST00000488198 TOPBP1Q92547 1522 aa30.72■■■□□ 2.51
CSF1-206ENST00000488198 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
CSF1-206ENST00000488198 IFT140Q96RY7 1462 aa30.55■■■□□ 2.48
CSF1-206ENST00000488198 CUX1P39880 1505 aa30.51■■■□□ 2.47
CSF1-206ENST00000488198 WRNQ14191 1432 aaPredicted RBP eCLIP30.48■■■□□ 2.47
CSF1-206ENST00000488198 POLA1P09884 1462 aaPredicted RBP30.46■■■□□ 2.47
CSF1-206ENST00000488198 FGD5Q6ZNL6 1462 aa30.43■■■□□ 2.46
CSF1-206ENST00000488198 SOGA1O94964 1423 aa30.39■■■□□ 2.46
CSF1-206ENST00000488198 TOP2BQ02880 1626 aa30.33■■■□□ 2.45
CSF1-206ENST00000488198 DNAJC5Q9H3Z4 198 aa30.33■■■□□ 2.45
CSF1-206ENST00000488198 TARBP1Q13395 1621 aaKnown RBP30.31■■■□□ 2.44
CSF1-206ENST00000488198 RAD54L2Q9Y4B4 1467 aa30.3■■■□□ 2.44
CSF1-206ENST00000488198 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
CSF1-206ENST00000488198 SYNJ1O43426 1573 aa30.28■■■□□ 2.44
CSF1-206ENST00000488198 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
CSF1-206ENST00000488198 WDR97A6NE52 1622 aa30.2■■■□□ 2.43
CSF1-206ENST00000488198 ABCA10Q8WWZ4 1543 aa30.17■■■□□ 2.42
CSF1-206ENST00000488198 AQRO60306 1485 aaKnown RBP eCLIP30.17■■■□□ 2.424e-6■■■■■ 28.3
CSF1-206ENST00000488198 TDRD9Q8NDG6 1382 aaKnown RBP30.16■■■□□ 2.42
CSF1-206ENST00000488198 EIF4G3O43432 1585 aaKnown RBP30.16■■■□□ 2.42
CSF1-206ENST00000488198 GRIN2BQ13224 1484 aa30.03■■■□□ 2.4
CSF1-206ENST00000488198 GAPVD1Q14C86 1478 aa30.03■■■□□ 2.4
CSF1-206ENST00000488198 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
CSF1-206ENST00000488198 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
CSF1-206ENST00000488198 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
CSF1-206ENST00000488198 OSCARQ8IYS5 282 aa29.9■■■□□ 2.38
CSF1-206ENST00000488198 SNAPC4Q5SXM2 1469 aa29.9■■■□□ 2.38
CSF1-206ENST00000488198 KIF27Q86VH2 1401 aa29.87■■■□□ 2.37
CSF1-206ENST00000488198 FBLN2P98095 1184 aa29.83■■■□□ 2.37
CSF1-206ENST00000488198 CHMP7Q8WUX9 453 aaPredicted RBP29.83■■■□□ 2.37
CSF1-206ENST00000488198 PBRM1Q86U86 1689 aa29.82■■■□□ 2.36
CSF1-206ENST00000488198 ERICH3Q5RHP9 1530 aa29.82■■■□□ 2.36
CSF1-206ENST00000488198 SYNJ2O15056 1496 aa29.8■■■□□ 2.36
CSF1-206ENST00000488198 FHAD1B1AJZ9 1412 aa29.73■■■□□ 2.35
CSF1-206ENST00000488198 ADAMTS12P58397 1594 aa29.68■■■□□ 2.34
CSF1-206ENST00000488198 IGF1RP08069 1367 aa29.67■■■□□ 2.34
CSF1-206ENST00000488198 CHD1O14646 1710 aa29.67■■■□□ 2.34
CSF1-206ENST00000488198 CHIC1Q5VXU3 224 aa29.62■■■□□ 2.33
CSF1-206ENST00000488198 GRIN2AQ12879 1464 aa29.61■■■□□ 2.33
CSF1-206ENST00000488198 CUL7Q14999 1698 aa29.56■■■□□ 2.32
CSF1-206ENST00000488198 CARMIL1Q5VZK9 1371 aa29.52■■■□□ 2.32
CSF1-206ENST00000488198 NUP160Q12769 1436 aa29.48■■■□□ 2.31
CSF1-206ENST00000488198 RUSC2Q8N2Y8 1516 aa29.48■■■□□ 2.31
CSF1-206ENST00000488198 EEA1Q15075 1411 aa29.46■■■□□ 2.31
CSF1-206ENST00000488198 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.31
CSF1-206ENST00000488198 CEP170Q5SW79 1584 aa29.38■■■□□ 2.29
CSF1-206ENST00000488198 RAPGEF2Q9Y4G8 1499 aa29.36■■■□□ 2.29
CSF1-206ENST00000488198 CSRNP3Q8WYN3 585 aa29.36■■■□□ 2.29
CSF1-206ENST00000488198 ARHGEF11O15085 1522 aa29.31■■■□□ 2.28
CSF1-206ENST00000488198 PRXQ9BXM0 1461 aa29.29■■■□□ 2.28
CSF1-206ENST00000488198 KIAA0586Q9BVV6 1533 aa29.27■■■□□ 2.28
CSF1-206ENST00000488198 RIMBP3CA6NJZ7 1639 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms