RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 RRBP1Q9P2E9 1410 aaKnown RBP16.79■□□□□ 0.28
HDLBP-242ENST00000488013 GLI2P10070 1586 aa16.79■□□□□ 0.28
HDLBP-242ENST00000488013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.79■□□□□ 0.28
HDLBP-242ENST00000488013 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
HDLBP-242ENST00000488013 RSPH4AQ5TD94 716 aa16.78■□□□□ 0.28
HDLBP-242ENST00000488013 PLEKHH2Q8IVE3 1493 aa16.75■□□□□ 0.27
HDLBP-242ENST00000488013 ABCA9Q8IUA7 1624 aa16.74■□□□□ 0.27
HDLBP-242ENST00000488013 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
HDLBP-242ENST00000488013 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
HDLBP-242ENST00000488013 KIAA1107Q9UPP5 1409 aa16.72■□□□□ 0.27
HDLBP-242ENST00000488013 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.27
HDLBP-242ENST00000488013 TCOF1Q13428 1488 aaKnown RBP16.71■□□□□ 0.27
HDLBP-242ENST00000488013 ITSN2Q9NZM3 1697 aa16.7■□□□□ 0.26
HDLBP-242ENST00000488013 TTC37Q6PGP7 1564 aa16.7■□□□□ 0.26
HDLBP-242ENST00000488013 DIP2BQ9P265 1576 aa16.7■□□□□ 0.26
HDLBP-242ENST00000488013 TEX14Q8IWB6 1497 aa16.7■□□□□ 0.26
HDLBP-242ENST00000488013 FANCAO15360 1455 aa16.69■□□□□ 0.26
HDLBP-242ENST00000488013 NEO1Q92859 1461 aa16.69■□□□□ 0.26
HDLBP-242ENST00000488013 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
HDLBP-242ENST00000488013 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
HDLBP-242ENST00000488013 PREX2Q70Z35 1606 aa16.67■□□□□ 0.26
HDLBP-242ENST00000488013 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
HDLBP-242ENST00000488013 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
HDLBP-242ENST00000488013 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
HDLBP-242ENST00000488013 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
HDLBP-242ENST00000488013 PTPN23Q9H3S7 1636 aa16.64■□□□□ 0.25
HDLBP-242ENST00000488013 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.25
HDLBP-242ENST00000488013 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
HDLBP-242ENST00000488013 MYO5CQ9NQX4 1742 aa16.63■□□□□ 0.25
HDLBP-242ENST00000488013 MAP3K4Q9Y6R4 1608 aa16.63■□□□□ 0.25
HDLBP-242ENST00000488013 CFAP74Q9C0B2 1584 aa16.62■□□□□ 0.25
HDLBP-242ENST00000488013 ADGRL1O94910 1474 aa16.61■□□□□ 0.25
HDLBP-242ENST00000488013 HNRNPMP52272 730 aaKnown RBP eCLIP16.61■□□□□ 0.25
HDLBP-242ENST00000488013 CDC42BPAQ5VT25 1732 aa16.61■□□□□ 0.25
HDLBP-242ENST00000488013 SCAPERQ9BY12 1400 aa16.61■□□□□ 0.25
HDLBP-242ENST00000488013 PCGF6Q9BYE7 350 aa16.6■□□□□ 0.25
HDLBP-242ENST00000488013 MBD5Q9P267 1494 aa16.6■□□□□ 0.25
HDLBP-242ENST00000488013 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
HDLBP-242ENST00000488013 CCDC141Q6ZP82 1450 aa16.59■□□□□ 0.25
HDLBP-242ENST00000488013 ITGAEP38570 1179 aa16.58■□□□□ 0.24
HDLBP-242ENST00000488013 ABCC5O15440 1437 aa16.58■□□□□ 0.24
HDLBP-242ENST00000488013 DAPK1P53355 1430 aa16.58■□□□□ 0.24
HDLBP-242ENST00000488013 ABCC1P33527 1531 aa16.57■□□□□ 0.24
HDLBP-242ENST00000488013 DENND4BO75064 1496 aaPredicted RBP16.57■□□□□ 0.24
HDLBP-242ENST00000488013 ROCK1Q13464 1354 aa16.57■□□□□ 0.24
HDLBP-242ENST00000488013 ARHGEF5Q12774 1597 aa16.56■□□□□ 0.24
HDLBP-242ENST00000488013 SAMD9LQ8IVG5 1584 aa16.56■□□□□ 0.24
HDLBP-242ENST00000488013 SHANK2Q9UPX8 1470 aa16.56■□□□□ 0.24
HDLBP-242ENST00000488013 CDC42BPBQ9Y5S2 1711 aa16.56■□□□□ 0.24
HDLBP-242ENST00000488013 ZNF518AQ6AHZ1 1483 aa16.55■□□□□ 0.24
HDLBP-242ENST00000488013 ANKRD30AQ9BXX3 1397 aa16.55■□□□□ 0.24
HDLBP-242ENST00000488013 SPAG9O60271 1321 aaKnown RBP16.55■□□□□ 0.24
HDLBP-242ENST00000488013 RTEL1-TNFRSF6BF6WH68 1400 aa16.54■□□□□ 0.24
HDLBP-242ENST00000488013 AFAP1Q8N556 730 aa16.54■□□□□ 0.24
HDLBP-242ENST00000488013 SYCP2Q9BX26 1530 aa16.54■□□□□ 0.24
HDLBP-242ENST00000488013 POGZQ7Z3K3 1410 aa16.53■□□□□ 0.24
HDLBP-242ENST00000488013 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
HDLBP-242ENST00000488013 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
HDLBP-242ENST00000488013 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.24
HDLBP-242ENST00000488013 TRAPPC8Q9Y2L5 1435 aa16.52■□□□□ 0.23
HDLBP-242ENST00000488013 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.23
HDLBP-242ENST00000488013 HRCP23327 699 aa16.51■□□□□ 0.23
HDLBP-242ENST00000488013 PTPRKQ15262 1439 aa16.49■□□□□ 0.23
HDLBP-242ENST00000488013 NCOA1Q15788 1441 aa16.49■□□□□ 0.23
HDLBP-242ENST00000488013 CHIC2Q9UKJ5 165 aa16.49■□□□□ 0.23
HDLBP-242ENST00000488013 MYT1LQ9UL68 1186 aa16.49■□□□□ 0.23
HDLBP-242ENST00000488013 KIF13AQ9H1H9 1805 aa16.49■□□□□ 0.23
HDLBP-242ENST00000488013 ADGRL2O95490 1459 aa16.48■□□□□ 0.23
HDLBP-242ENST00000488013 HFM1A2PYH4 1435 aa16.48■□□□□ 0.23
HDLBP-242ENST00000488013 RAPGEF3O95398 923 aa16.48■□□□□ 0.23
HDLBP-242ENST00000488013 MAGI2Q86UL8 1455 aa16.48■□□□□ 0.23
HDLBP-242ENST00000488013 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
HDLBP-242ENST00000488013 RRP7BPQ9NSQ0 103 aa16.45■□□□□ 0.22
HDLBP-242ENST00000488013 MAST1Q9Y2H9 1570 aa16.45■□□□□ 0.22
HDLBP-242ENST00000488013 SETD5Q9C0A6 1442 aa16.45■□□□□ 0.22
HDLBP-242ENST00000488013 KIF15Q9NS87 1388 aa16.44■□□□□ 0.22
HDLBP-242ENST00000488013 PPRC1Q5VV67 1664 aaKnown RBP16.43■□□□□ 0.22
HDLBP-242ENST00000488013 KDM5CP41229 1560 aa16.43■□□□□ 0.22
HDLBP-242ENST00000488013 NAIPQ13075 1403 aa16.42■□□□□ 0.22
HDLBP-242ENST00000488013 ZMYM4Q5VZL5 1548 aa16.4■□□□□ 0.22
HDLBP-242ENST00000488013 ANKRD50Q9ULJ7 1429 aa16.4■□□□□ 0.22
HDLBP-242ENST00000488013 COL17A1Q9UMD9 1497 aaPredicted RBP16.39■□□□□ 0.21
HDLBP-242ENST00000488013 ATP7AQ04656 1500 aa16.39■□□□□ 0.21
HDLBP-242ENST00000488013 ZFYVE16Q7Z3T8 1539 aa16.39■□□□□ 0.21
HDLBP-242ENST00000488013 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
HDLBP-242ENST00000488013 ERBINQ96RT1 1412 aa16.38■□□□□ 0.21
HDLBP-242ENST00000488013 DUOX2Q9NRD8 1548 aa16.38■□□□□ 0.21
HDLBP-242ENST00000488013 TSPOAP1O95153 1857 aa16.37■□□□□ 0.21
HDLBP-242ENST00000488013 PLXNC1O60486 1568 aa16.37■□□□□ 0.21
HDLBP-242ENST00000488013 HECW2Q9P2P5 1572 aa16.36■□□□□ 0.21
HDLBP-242ENST00000488013 CROCC2H7BZ55 1655 aa16.36■□□□□ 0.21
HDLBP-242ENST00000488013 RAB3GAP2Q9H2M9 1393 aa16.36■□□□□ 0.21
HDLBP-242ENST00000488013 INO80Q9ULG1 1556 aaPredicted RBP16.35■□□□□ 0.21
HDLBP-242ENST00000488013 ATP10AO60312 1499 aa16.35■□□□□ 0.21
HDLBP-242ENST00000488013 A2MP01023 1474 aa16.34■□□□□ 0.21
HDLBP-242ENST00000488013 KDM6BO15054 1643 aa16.33■□□□□ 0.2
HDLBP-242ENST00000488013 FRMPD1Q5SYB0 1578 aa16.32■□□□□ 0.2
HDLBP-242ENST00000488013 RICTORQ6R327 1708 aa16.32■□□□□ 0.2
HDLBP-242ENST00000488013 ADGBQ8N7X0 1667 aa16.32■□□□□ 0.2
HDLBP-242ENST00000488013 TRIM52Q96A61 297 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms