RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 POGZQ7Z3K3 1410 aa18.35■□□□□ 0.53
SPEN-205ENST00000487496 ZMYM4Q5VZL5 1548 aa18.34■□□□□ 0.53
SPEN-205ENST00000487496 ARHGEF40Q8TER5 1519 aa18.33■□□□□ 0.52
SPEN-205ENST00000487496 MAGI2Q86UL8 1455 aa18.33■□□□□ 0.52
SPEN-205ENST00000487496 YEATS2Q9ULM3 1422 aa18.32■□□□□ 0.52
SPEN-205ENST00000487496 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
SPEN-205ENST00000487496 CDC42BPBQ9Y5S2 1711 aa18.31■□□□□ 0.52
SPEN-205ENST00000487496 ZFYVE16Q7Z3T8 1539 aa18.3■□□□□ 0.52
SPEN-205ENST00000487496 AFAP1Q8N556 730 aa18.3■□□□□ 0.52
SPEN-205ENST00000487496 PREX2Q70Z35 1606 aa18.3■□□□□ 0.52
SPEN-205ENST00000487496 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
SPEN-205ENST00000487496 GPATCH8Q9UKJ3 1502 aaKnown RBP18.28■□□□□ 0.52
SPEN-205ENST00000487496 ZNF518AQ6AHZ1 1483 aa18.27■□□□□ 0.52
SPEN-205ENST00000487496 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
SPEN-205ENST00000487496 ADAMTSL3P82987 1691 aa18.25■□□□□ 0.51
SPEN-205ENST00000487496 ZNF777Q9ULD5 760 aaPredicted RBP18.25■□□□□ 0.51
SPEN-205ENST00000487496 ARHGEF12Q9NZN5 1544 aa18.24■□□□□ 0.51
SPEN-205ENST00000487496 BCORL1Q5H9F3 1711 aa18.24■□□□□ 0.51
SPEN-205ENST00000487496 ATP10AO60312 1499 aa18.24■□□□□ 0.51
SPEN-205ENST00000487496 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
SPEN-205ENST00000487496 ABCC1P33527 1531 aa18.23■□□□□ 0.51
SPEN-205ENST00000487496 KDM5CP41229 1560 aa18.23■□□□□ 0.51
SPEN-205ENST00000487496 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
SPEN-205ENST00000487496 CFDP1Q9UEE9 299 aaPredicted RBP18.23■□□□□ 0.51
SPEN-205ENST00000487496 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
SPEN-205ENST00000487496 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
SPEN-205ENST00000487496 PTPRMP28827 1452 aa18.21■□□□□ 0.51
SPEN-205ENST00000487496 EHBP1L1Q8N3D4 1523 aa18.21■□□□□ 0.51
SPEN-205ENST00000487496 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
SPEN-205ENST00000487496 SIGLEC1Q9BZZ2 1709 aa18.2■□□□□ 0.5
SPEN-205ENST00000487496 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
SPEN-205ENST00000487496 SAMD9LQ8IVG5 1584 aa18.19■□□□□ 0.5
SPEN-205ENST00000487496 MADDQ8WXG6 1647 aa18.19■□□□□ 0.5
SPEN-205ENST00000487496 HECW2Q9P2P5 1572 aa18.18■□□□□ 0.5
SPEN-205ENST00000487496 HNRNPMP52272 730 aaKnown RBP eCLIP18.18■□□□□ 0.5
SPEN-205ENST00000487496 MLECQ14165 292 aa18.18■□□□□ 0.5
SPEN-205ENST00000487496 ITSN2Q9NZM3 1697 aa18.18■□□□□ 0.5
SPEN-205ENST00000487496 TIAM1Q13009 1591 aa18.16■□□□□ 0.5
SPEN-205ENST00000487496 KIAA1107Q9UPP5 1409 aa18.15■□□□□ 0.5
SPEN-205ENST00000487496 SYCP2Q9BX26 1530 aa18.15■□□□□ 0.5
SPEN-205ENST00000487496 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.5
SPEN-205ENST00000487496 DIP2CQ9Y2E4 1556 aa18.14■□□□□ 0.49
SPEN-205ENST00000487496 ZNF644Q9H582 1327 aaPredicted RBP18.14■□□□□ 0.49
SPEN-205ENST00000487496 NCOA2Q15596 1464 aa18.14■□□□□ 0.49
SPEN-205ENST00000487496 SPAG9O60271 1321 aaKnown RBP18.12■□□□□ 0.49
SPEN-205ENST00000487496 ABCA6Q8N139 1617 aa18.12■□□□□ 0.49
SPEN-205ENST00000487496 RIMS1Q86UR5 1692 aaKnown RBP18.12■□□□□ 0.49
SPEN-205ENST00000487496 LRRC9Q6ZRR7 1453 aa18.11■□□□□ 0.49
SPEN-205ENST00000487496 REREQ9P2R6 1566 aa18.11■□□□□ 0.49
SPEN-205ENST00000487496 KIDINS220Q9ULH0 1771 aa18.1■□□□□ 0.49
SPEN-205ENST00000487496 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
SPEN-205ENST00000487496 MAP3K1Q13233 1512 aa18.09■□□□□ 0.49
SPEN-205ENST00000487496 KANK4Q5T7N3 995 aaPredicted RBP18.09■□□□□ 0.49
SPEN-205ENST00000487496 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.48
SPEN-205ENST00000487496 AGLP35573 1532 aa18.07■□□□□ 0.48
SPEN-205ENST00000487496 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
SPEN-205ENST00000487496 FER1L4A9Z1Z3 1794 aa18.05■□□□□ 0.48
SPEN-205ENST00000487496 ATP7AQ04656 1500 aa18.04■□□□□ 0.48
SPEN-205ENST00000487496 INO80Q9ULG1 1556 aaPredicted RBP18.03■□□□□ 0.48
SPEN-205ENST00000487496 APLP2Q06481 763 aa18.02■□□□□ 0.48
SPEN-205ENST00000487496 CAMSAP2Q08AD1 1489 aa18.01■□□□□ 0.47
SPEN-205ENST00000487496 CEBPAP49715 358 aaPredicted RBP18.01■□□□□ 0.47
SPEN-205ENST00000487496 RSPH4AQ5TD94 716 aa18.01■□□□□ 0.47
SPEN-205ENST00000487496 A2MP01023 1474 aa18■□□□□ 0.47
SPEN-205ENST00000487496 LMTK3Q96Q04 1460 aa18■□□□□ 0.47
SPEN-205ENST00000487496 RTEL1-TNFRSF6BF6WH68 1400 aa17.99■□□□□ 0.47
SPEN-205ENST00000487496 ESF1Q9H501 851 aaKnown RBP17.98■□□□□ 0.47
SPEN-205ENST00000487496 CCDC141Q6ZP82 1450 aa17.98■□□□□ 0.47
SPEN-205ENST00000487496 PLXNC1O60486 1568 aa17.96■□□□□ 0.47
SPEN-205ENST00000487496 MYOM3Q5VTT5 1437 aa17.96■□□□□ 0.47
SPEN-205ENST00000487496 MIA2Q96PC5 1412 aa17.95■□□□□ 0.46
SPEN-205ENST00000487496 HSPA2P54652 639 aa17.94■□□□□ 0.46
SPEN-205ENST00000487496 ARHGEF5Q12774 1597 aa17.93■□□□□ 0.46
SPEN-205ENST00000487496 CNTLNQ9NXG0 1405 aa17.93■□□□□ 0.46
SPEN-205ENST00000487496 TSPY4P0CV99 314 aa17.93■□□□□ 0.46
SPEN-205ENST00000487496 TSPY10P0CW01 314 aa17.93■□□□□ 0.46
SPEN-205ENST00000487496 DHX29Q7Z478 1369 aaKnown RBP17.92■□□□□ 0.46
SPEN-205ENST00000487496 GGT6Q6P531 493 aa17.92■□□□□ 0.46
SPEN-205ENST00000487496 ADGBQ8N7X0 1667 aa17.92■□□□□ 0.46
SPEN-205ENST00000487496 C3P01024 1663 aa17.89■□□□□ 0.45
SPEN-205ENST00000487496 ZMYM3Q14202 1370 aa17.89■□□□□ 0.45
SPEN-205ENST00000487496 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
SPEN-205ENST00000487496 KIF3BO15066 747 aa17.86■□□□□ 0.45
SPEN-205ENST00000487496 PREX1Q8TCU6 1659 aa17.86■□□□□ 0.45
SPEN-205ENST00000487496 UHRF1BP1Q6BDS2 1440 aa17.85■□□□□ 0.45
SPEN-205ENST00000487496 SETD1BQ9UPS6 1966 aaKnown RBP17.85■□□□□ 0.45
SPEN-205ENST00000487496 MROH2AA6NES4 1674 aa17.83■□□□□ 0.45
SPEN-205ENST00000487496 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.45
SPEN-205ENST00000487496 FGD6Q6ZV73 1430 aa17.83■□□□□ 0.45
SPEN-205ENST00000487496 CLTCQ00610 1675 aaKnown RBP17.83■□□□□ 0.44
SPEN-205ENST00000487496 NPATQ14207 1427 aa17.81■□□□□ 0.44
SPEN-205ENST00000487496 PTPN23Q9H3S7 1636 aa17.81■□□□□ 0.44
SPEN-205ENST00000487496 ABCC5O15440 1437 aa17.81■□□□□ 0.44
SPEN-205ENST00000487496 TCOF1Q13428 1488 aaKnown RBP17.8■□□□□ 0.44
SPEN-205ENST00000487496 PTPRKQ15262 1439 aa17.79■□□□□ 0.44
SPEN-205ENST00000487496 WASHC2CQ9Y4E1 1318 aa17.77■□□□□ 0.44
SPEN-205ENST00000487496 SHANK2Q9UPX8 1470 aa17.76■□□□□ 0.43
SPEN-205ENST00000487496 DAPK1P53355 1430 aa17.76■□□□□ 0.43
SPEN-205ENST00000487496 ILDR1Q86SU0 546 aaPredicted RBP17.75■□□□□ 0.43
SPEN-205ENST00000487496 KDM5DQ9BY66 1539 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms