RNA–Protein interactions for RNA: ENST00000487451.1

TFE3-203, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 3

Gene TFE3, Length 1,058 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-203ENST00000487451 ATP1B4Q9UN42 357 aaPredicted RBP27.44■■□□□ 1.98
TFE3-203ENST00000487451 POGZQ7Z3K3 1410 aa27.41■■□□□ 1.98
TFE3-203ENST00000487451 SCAPERQ9BY12 1400 aa27.4■■□□□ 1.98
TFE3-203ENST00000487451 PCF11O94913 1555 aaKnown RBP27.39■■□□□ 1.97
TFE3-203ENST00000487451 LMTK3Q96Q04 1460 aa27.38■■□□□ 1.97
TFE3-203ENST00000487451 MAGI2Q86UL8 1455 aa27.35■■□□□ 1.97
TFE3-203ENST00000487451 TROQ12816 1431 aaPredicted RBP27.33■■□□□ 1.97
TFE3-203ENST00000487451 FER1L4A9Z1Z3 1794 aa27.32■■□□□ 1.96
TFE3-203ENST00000487451 CDC42BPBQ9Y5S2 1711 aa27.3■■□□□ 1.96
TFE3-203ENST00000487451 ARHGAP5Q13017 1502 aa27.29■■□□□ 1.96
TFE3-203ENST00000487451 PLPPR3Q6T4P5 718 aa27.27■■□□□ 1.96
TFE3-203ENST00000487451 MLECQ14165 292 aa27.26■■□□□ 1.95
TFE3-203ENST00000487451 EFCAB2Q5VUJ9 269 aa27.26■■□□□ 1.95
TFE3-203ENST00000487451 CDK11AQ9UQ88 783 aaPredicted RBP27.26■■□□□ 1.95
TFE3-203ENST00000487451 KDM5CP41229 1560 aa27.25■■□□□ 1.95
TFE3-203ENST00000487451 ATP10AO60312 1499 aa27.24■■□□□ 1.95
TFE3-203ENST00000487451 CLIP1P30622 1438 aa27.24■■□□□ 1.95
TFE3-203ENST00000487451 ARHGEF12Q9NZN5 1544 aa27.23■■□□□ 1.95
TFE3-203ENST00000487451 C9orf84Q5VXU9 1444 aa27.23■■□□□ 1.95
TFE3-203ENST00000487451 PREX2Q70Z35 1606 aa27.23■■□□□ 1.95
TFE3-203ENST00000487451 CASKIN1Q8WXD9 1431 aa27.22■■□□□ 1.95
TFE3-203ENST00000487451 ZNF518AQ6AHZ1 1483 aa27.21■■□□□ 1.95
TFE3-203ENST00000487451 DIP2CQ9Y2E4 1556 aa27.18■■□□□ 1.94
TFE3-203ENST00000487451 HSPA2P54652 639 aa27.18■■□□□ 1.94
TFE3-203ENST00000487451 AFAP1Q8N556 730 aa27.18■■□□□ 1.94
TFE3-203ENST00000487451 CCDC18Q5T9S5 1454 aa27.18■■□□□ 1.94
TFE3-203ENST00000487451 ABCA6Q8N139 1617 aa27.17■■□□□ 1.94
TFE3-203ENST00000487451 CDC42BPAQ5VT25 1732 aa27.17■■□□□ 1.94
TFE3-203ENST00000487451 ITSN2Q9NZM3 1697 aa27.16■■□□□ 1.94
TFE3-203ENST00000487451 ABCC1P33527 1531 aa27.16■■□□□ 1.94
TFE3-203ENST00000487451 FYCO1Q9BQS8 1478 aa27.12■■□□□ 1.93
TFE3-203ENST00000487451 TRAPPC8Q9Y2L5 1435 aa27.11■■□□□ 1.93
TFE3-203ENST00000487451 PREX1Q8TCU6 1659 aa27.09■■□□□ 1.93
TFE3-203ENST00000487451 REREQ9P2R6 1566 aa27.09■■□□□ 1.93
TFE3-203ENST00000487451 FBXO41Q8TF61 875 aa27.08■■□□□ 1.93
TFE3-203ENST00000487451 MLH3Q9UHC1 1453 aa27.07■■□□□ 1.92
TFE3-203ENST00000487451 KIDINS220Q9ULH0 1771 aa27.07■■□□□ 1.92
TFE3-203ENST00000487451 CEBPAP49715 358 aaPredicted RBP27.06■■□□□ 1.92
TFE3-203ENST00000487451 SAMD9LQ8IVG5 1584 aa27.04■■□□□ 1.92
TFE3-203ENST00000487451 MYT1LQ9UL68 1186 aa27.03■■□□□ 1.92
TFE3-203ENST00000487451 C3P01024 1663 aa27.01■■□□□ 1.91
TFE3-203ENST00000487451 AGLP35573 1532 aa26.98■■□□□ 1.91
TFE3-203ENST00000487451 SYCP2Q9BX26 1530 aa26.98■■□□□ 1.91
TFE3-203ENST00000487451 GPATCH8Q9UKJ3 1502 aaKnown RBP26.97■■□□□ 1.91
TFE3-203ENST00000487451 STRCQ7RTU9 1775 aa26.95■■□□□ 1.9
TFE3-203ENST00000487451 ZNF777Q9ULD5 760 aaPredicted RBP26.92■■□□□ 1.9
TFE3-203ENST00000487451 UHRF1BP1Q6BDS2 1440 aa26.89■■□□□ 1.89
TFE3-203ENST00000487451 SUPT6HQ7KZ85 1726 aaKnown RBP26.87■■□□□ 1.89
TFE3-203ENST00000487451 SETD1BQ9UPS6 1966 aaKnown RBP26.87■■□□□ 1.89
TFE3-203ENST00000487451 INO80Q9ULG1 1556 aaPredicted RBP26.87■■□□□ 1.89
TFE3-203ENST00000487451 HNRNPMP52272 730 aaKnown RBP eCLIP26.86■■□□□ 1.89
TFE3-203ENST00000487451 ATP7AQ04656 1500 aa26.85■■□□□ 1.89
TFE3-203ENST00000487451 TIAM1Q13009 1591 aa26.84■■□□□ 1.89
TFE3-203ENST00000487451 PLXNC1O60486 1568 aa26.81■■□□□ 1.88
TFE3-203ENST00000487451 CERKQ8TCT0 537 aa26.81■■□□□ 1.88
TFE3-203ENST00000487451 MROH2AA6NES4 1674 aa26.81■■□□□ 1.88
TFE3-203ENST00000487451 CCNB3Q8WWL7 1395 aa26.81■■□□□ 1.88
TFE3-203ENST00000487451 SPAG9O60271 1321 aaKnown RBP26.8■■□□□ 1.88
TFE3-203ENST00000487451 MTUS2Q5JR59 1369 aa26.8■■□□□ 1.88
TFE3-203ENST00000487451 KIAA1107Q9UPP5 1409 aa26.8■■□□□ 1.88
TFE3-203ENST00000487451 CFDP1Q9UEE9 299 aaPredicted RBP26.79■■□□□ 1.88
TFE3-203ENST00000487451 EHBP1L1Q8N3D4 1523 aa26.78■■□□□ 1.88
TFE3-203ENST00000487451 CLTCQ00610 1675 aaKnown RBP26.77■■□□□ 1.88
TFE3-203ENST00000487451 PLEKHH2Q8IVE3 1493 aa26.77■■□□□ 1.88
TFE3-203ENST00000487451 ESF1Q9H501 851 aaKnown RBP26.77■■□□□ 1.88
TFE3-203ENST00000487451 CNTLNQ9NXG0 1405 aa26.76■■□□□ 1.87
TFE3-203ENST00000487451 CEP162Q5TB80 1403 aa26.75■■□□□ 1.87
TFE3-203ENST00000487451 ZNF644Q9H582 1327 aaPredicted RBP26.74■■□□□ 1.87
TFE3-203ENST00000487451 A2MP01023 1474 aa26.74■■□□□ 1.87
TFE3-203ENST00000487451 ADGBQ8N7X0 1667 aa26.72■■□□□ 1.87
TFE3-203ENST00000487451 MBD5Q9P267 1494 aa26.7■■□□□ 1.87
TFE3-203ENST00000487451 ZMYM3Q14202 1370 aa26.69■■□□□ 1.86
TFE3-203ENST00000487451 NPATQ14207 1427 aa26.67■■□□□ 1.86
TFE3-203ENST00000487451 NCOA1Q15788 1441 aa26.67■■□□□ 1.86
TFE3-203ENST00000487451 MYO3AQ8NEV4 1616 aa26.67■■□□□ 1.86
TFE3-203ENST00000487451 PTPRTO14522 1441 aa26.66■■□□□ 1.86
TFE3-203ENST00000487451 DMRT2Q9Y5R5 561 aa26.66■■□□□ 1.86
TFE3-203ENST00000487451 CAMSAP1Q5T5Y3 1602 aa26.65■■□□□ 1.86
TFE3-203ENST00000487451 ZNF142P52746 1687 aaPredicted RBP26.64■■□□□ 1.86
TFE3-203ENST00000487451 LTBP4Q8N2S1 1624 aa26.62■■□□□ 1.85
TFE3-203ENST00000487451 NCOA2Q15596 1464 aa26.62■■□□□ 1.85
TFE3-203ENST00000487451 PTPRKQ15262 1439 aa26.6■■□□□ 1.85
TFE3-203ENST00000487451 GGT6Q6P531 493 aa26.6■■□□□ 1.85
TFE3-203ENST00000487451 CAMSAP2Q08AD1 1489 aa26.59■■□□□ 1.85
TFE3-203ENST00000487451 CEP170BQ9Y4F5 1589 aaPredicted RBP26.58■■□□□ 1.85
TFE3-203ENST00000487451 RTEL1-TNFRSF6BF6WH68 1400 aa26.56■■□□□ 1.84
TFE3-203ENST00000487451 CCDC141Q6ZP82 1450 aa26.55■■□□□ 1.84
TFE3-203ENST00000487451 DHX29Q7Z478 1369 aaKnown RBP26.51■■□□□ 1.83
TFE3-203ENST00000487451 NCKAP5LQ9HCH0 1330 aa26.51■■□□□ 1.83
TFE3-203ENST00000487451 ARHGEF5Q12774 1597 aa26.48■■□□□ 1.83
TFE3-203ENST00000487451 PLA2R1Q13018 1463 aa26.48■■□□□ 1.83
TFE3-203ENST00000487451 LOC105371045A0A1W2PR82 267 aa26.47■■□□□ 1.83
TFE3-203ENST00000487451 TCOF1Q13428 1488 aaKnown RBP26.47■■□□□ 1.83
TFE3-203ENST00000487451 LRRC9Q6ZRR7 1453 aa26.46■■□□□ 1.83
TFE3-203ENST00000487451 VPS8Q8N3P4 1428 aa26.46■■□□□ 1.83
TFE3-203ENST00000487451 DNMT1P26358 1616 aaKnown RBP26.46■■□□□ 1.83
TFE3-203ENST00000487451 KDM5DQ9BY66 1539 aa26.44■■□□□ 1.82
TFE3-203ENST00000487451 PPP6R1Q9UPN7 881 aa26.44■■□□□ 1.82
TFE3-203ENST00000487451 KIF3BO15066 747 aa26.43■■□□□ 1.82
TFE3-203ENST00000487451 A2ML1A8K2U0 1454 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms