RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 POGZQ7Z3K3 1410 aa35.23■■■■□ 3.23
RPL35-203ENST00000487431 ARID4BQ4LE39 1312 aaPredicted RBP35.2■■■■□ 3.23
RPL35-203ENST00000487431 SCAPERQ9BY12 1400 aa35.2■■■■□ 3.23
RPL35-203ENST00000487431 YEATS2Q9ULM3 1422 aa35.19■■■■□ 3.22
RPL35-203ENST00000487431 RIMS1Q86UR5 1692 aaKnown RBP35.18■■■■□ 3.22
RPL35-203ENST00000487431 PCF11O94913 1555 aaKnown RBP35.17■■■■□ 3.22
RPL35-203ENST00000487431 CLIP1P30622 1438 aa35.15■■■■□ 3.22
RPL35-203ENST00000487431 EFCAB2Q5VUJ9 269 aa35.14■■■■□ 3.22
RPL35-203ENST00000487431 CASKIN1Q8WXD9 1431 aa35.13■■■■□ 3.21
RPL35-203ENST00000487431 CDC42BPBQ9Y5S2 1711 aa35.12■■■■□ 3.21
RPL35-203ENST00000487431 CCDC18Q5T9S5 1454 aa35.11■■■■□ 3.21
RPL35-203ENST00000487431 ARHGAP5Q13017 1502 aa35.08■■■■□ 3.21
RPL35-203ENST00000487431 ILDR1Q86SU0 546 aaPredicted RBP35.07■■■■□ 3.2
RPL35-203ENST00000487431 KDM5CP41229 1560 aa35.07■■■■□ 3.2
RPL35-203ENST00000487431 PREX2Q70Z35 1606 aa35.05■■■■□ 3.2
RPL35-203ENST00000487431 FER1L4A9Z1Z3 1794 aa35.05■■■■□ 3.2
RPL35-203ENST00000487431 ZNF518AQ6AHZ1 1483 aa35.04■■■■□ 3.2
RPL35-203ENST00000487431 ATP10AO60312 1499 aa35.03■■■■□ 3.2
RPL35-203ENST00000487431 LMTK3Q96Q04 1460 aa35.02■■■■□ 3.2
RPL35-203ENST00000487431 FYCO1Q9BQS8 1478 aa35.02■■■■□ 3.2
RPL35-203ENST00000487431 C9orf84Q5VXU9 1444 aa35■■■■□ 3.19
RPL35-203ENST00000487431 CDC42BPAQ5VT25 1732 aa34.98■■■■□ 3.19
RPL35-203ENST00000487431 ARHGEF12Q9NZN5 1544 aa34.96■■■■□ 3.19
RPL35-203ENST00000487431 ABCC1P33527 1531 aa34.93■■■■□ 3.18
RPL35-203ENST00000487431 ITSN2Q9NZM3 1697 aa34.92■■■■□ 3.18
RPL35-203ENST00000487431 REREQ9P2R6 1566 aa34.91■■■■□ 3.18
RPL35-203ENST00000487431 DIP2CQ9Y2E4 1556 aa34.91■■■■□ 3.18
RPL35-203ENST00000487431 AFAP1Q8N556 730 aa34.89■■■■□ 3.18
RPL35-203ENST00000487431 MLH3Q9UHC1 1453 aa34.88■■■■□ 3.17
RPL35-203ENST00000487431 ABCA6Q8N139 1617 aa34.87■■■■□ 3.17
RPL35-203ENST00000487431 MLECQ14165 292 aa34.85■■■■□ 3.17
RPL35-203ENST00000487431 TRAPPC8Q9Y2L5 1435 aa34.81■■■■□ 3.16
RPL35-203ENST00000487431 KIDINS220Q9ULH0 1771 aa34.79■■■■□ 3.16
RPL35-203ENST00000487431 SAMD9LQ8IVG5 1584 aa34.76■■■■□ 3.16
RPL35-203ENST00000487431 PREX1Q8TCU6 1659 aa34.76■■■■□ 3.15
RPL35-203ENST00000487431 AGLP35573 1532 aa34.76■■■■□ 3.15
RPL35-203ENST00000487431 GPATCH8Q9UKJ3 1502 aaKnown RBP34.74■■■■□ 3.15
RPL35-203ENST00000487431 PLPPR3Q6T4P5 718 aa34.71■■■■□ 3.15
RPL35-203ENST00000487431 MYT1LQ9UL68 1186 aa34.68■■■■□ 3.14
RPL35-203ENST00000487431 SETD1BQ9UPS6 1966 aaKnown RBP34.67■■■■□ 3.14
RPL35-203ENST00000487431 HSPA2P54652 639 aa34.67■■■■□ 3.14
RPL35-203ENST00000487431 SYCP2Q9BX26 1530 aa34.66■■■■□ 3.14
RPL35-203ENST00000487431 C3P01024 1663 aa34.63■■■■□ 3.13
RPL35-203ENST00000487431 KIAA1107Q9UPP5 1409 aa34.61■■■■□ 3.13
RPL35-203ENST00000487431 FBXO41Q8TF61 875 aa34.6■■■■□ 3.13
RPL35-203ENST00000487431 PLEKHH2Q8IVE3 1493 aa34.59■■■■□ 3.13
RPL35-203ENST00000487431 CEBPAP49715 358 aaPredicted RBP34.59■■■■□ 3.13
RPL35-203ENST00000487431 MTUS2Q5JR59 1369 aa34.57■■■■□ 3.12
RPL35-203ENST00000487431 INO80Q9ULG1 1556 aaPredicted RBP34.57■■■■□ 3.12
RPL35-203ENST00000487431 EHBP1L1Q8N3D4 1523 aa34.56■■■■□ 3.12
RPL35-203ENST00000487431 ZNF777Q9ULD5 760 aaPredicted RBP34.56■■■■□ 3.12
RPL35-203ENST00000487431 CCNB3Q8WWL7 1395 aa34.56■■■■□ 3.12
RPL35-203ENST00000487431 CEP162Q5TB80 1403 aa34.55■■■■□ 3.12
RPL35-203ENST00000487431 TIAM1Q13009 1591 aa34.54■■■■□ 3.12
RPL35-203ENST00000487431 ATP7AQ04656 1500 aa34.54■■■■□ 3.12
RPL35-203ENST00000487431 CFDP1Q9UEE9 299 aaPredicted RBP34.52■■■■□ 3.12
RPL35-203ENST00000487431 STRCQ7RTU9 1775 aa34.51■■■■□ 3.12
RPL35-203ENST00000487431 MROH2AA6NES4 1674 aa34.51■■■■□ 3.12
RPL35-203ENST00000487431 HNRNPMP52272 730 aaKnown RBP eCLIP34.51■■■■□ 3.12
RPL35-203ENST00000487431 SUPT6HQ7KZ85 1726 aaKnown RBP34.5■■■■□ 3.11
RPL35-203ENST00000487431 PLXNC1O60486 1568 aa34.5■■■■□ 3.11
RPL35-203ENST00000487431 UHRF1BP1Q6BDS2 1440 aa34.5■■■■□ 3.11
RPL35-203ENST00000487431 SPAG9O60271 1321 aaKnown RBP34.5■■■■□ 3.11
RPL35-203ENST00000487431 CNTLNQ9NXG0 1405 aa34.49■■■■□ 3.11
RPL35-203ENST00000487431 ADGBQ8N7X0 1667 aa34.43■■■■□ 3.1
RPL35-203ENST00000487431 ESF1Q9H501 851 aaKnown RBP34.42■■■■□ 3.1
RPL35-203ENST00000487431 A2MP01023 1474 aa34.39■■■■□ 3.1
RPL35-203ENST00000487431 MBD5Q9P267 1494 aa34.39■■■■□ 3.1
RPL35-203ENST00000487431 CLTCQ00610 1675 aaKnown RBP34.35■■■■□ 3.09
RPL35-203ENST00000487431 ZNF644Q9H582 1327 aaPredicted RBP34.34■■■■□ 3.09
RPL35-203ENST00000487431 NPATQ14207 1427 aa34.34■■■■□ 3.09
RPL35-203ENST00000487431 RTEL1-TNFRSF6BF6WH68 1400 aa34.31■■■■□ 3.08
RPL35-203ENST00000487431 NCOA2Q15596 1464 aa34.31■■■■□ 3.08
RPL35-203ENST00000487431 DMRT2Q9Y5R5 561 aa34.3■■■■□ 3.08
RPL35-203ENST00000487431 ZMYM3Q14202 1370 aa34.29■■■■□ 3.08
RPL35-203ENST00000487431 CERKQ8TCT0 537 aa34.29■■■■□ 3.08
RPL35-203ENST00000487431 PTPRTO14522 1441 aa34.25■■■■□ 3.07
RPL35-203ENST00000487431 CAMSAP2Q08AD1 1489 aa34.23■■■■□ 3.07
RPL35-203ENST00000487431 VPS8Q8N3P4 1428 aa34.22■■■■□ 3.07
RPL35-203ENST00000487431 ZNF142P52746 1687 aaPredicted RBP34.22■■■■□ 3.07
RPL35-203ENST00000487431 CCDC141Q6ZP82 1450 aa34.21■■■■□ 3.07
RPL35-203ENST00000487431 PPP6R1Q9UPN7 881 aa34.21■■■■□ 3.07
RPL35-203ENST00000487431 NCOA1Q15788 1441 aa34.21■■■■□ 3.07
RPL35-203ENST00000487431 MYO3AQ8NEV4 1616 aa34.19■■■■□ 3.06
RPL35-203ENST00000487431 ARHGEF5Q12774 1597 aa34.18■■■■□ 3.06
RPL35-203ENST00000487431 PTPRKQ15262 1439 aa34.17■■■■□ 3.06
RPL35-203ENST00000487431 DHX29Q7Z478 1369 aaKnown RBP34.17■■■■□ 3.06
RPL35-203ENST00000487431 LRRC9Q6ZRR7 1453 aa34.16■■■■□ 3.06
RPL35-203ENST00000487431 CAMSAP1Q5T5Y3 1602 aa34.15■■■■□ 3.06
RPL35-203ENST00000487431 RSPH4AQ5TD94 716 aa34.15■■■■□ 3.06
RPL35-203ENST00000487431 GGT6Q6P531 493 aa34.15■■■■□ 3.06
RPL35-203ENST00000487431 MAP3K1Q13233 1512 aa34.14■■■■□ 3.06
RPL35-203ENST00000487431 LOC105371045A0A1W2PR82 267 aa34.12■■■■□ 3.05
RPL35-203ENST00000487431 CEP170BQ9Y4F5 1589 aaPredicted RBP34.11■■■■□ 3.05
RPL35-203ENST00000487431 FAM135AQ9P2D6 1515 aa34.1■■■■□ 3.05
RPL35-203ENST00000487431 LTBP4Q8N2S1 1624 aa34.07■■■■□ 3.04
RPL35-203ENST00000487431 PLA2R1Q13018 1463 aa34.06■■■■□ 3.04
RPL35-203ENST00000487431 MAST1Q9Y2H9 1570 aa34.03■■■■□ 3.04
RPL35-203ENST00000487431 KDM5DQ9BY66 1539 aa34.03■■■■□ 3.04
RPL35-203ENST00000487431 TCOF1Q13428 1488 aaKnown RBP33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms