RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 DNMT1P26358 1616 aaKnown RBP17.38■□□□□ 0.37
PTCD2-204ENST00000486995 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
PTCD2-204ENST00000486995 CEP170Q5SW79 1584 aa17.37■□□□□ 0.37
PTCD2-204ENST00000486995 FOXD1Q16676 465 aa17.36■□□□□ 0.37
PTCD2-204ENST00000486995 PRG4Q92954 1404 aaPredicted RBP17.36■□□□□ 0.37
PTCD2-204ENST00000486995 TROQ12816 1431 aaPredicted RBP17.35■□□□□ 0.37
PTCD2-204ENST00000486995 PLB1Q6P1J6 1458 aa17.34■□□□□ 0.37
PTCD2-204ENST00000486995 HSPA5P11021 654 aaKnown RBP17.34■□□□□ 0.37
PTCD2-204ENST00000486995 L3MBTL2Q969R5 705 aa17.34■□□□□ 0.37
PTCD2-204ENST00000486995 ANKRD30BQ9BXX2 1392 aa17.34■□□□□ 0.37
PTCD2-204ENST00000486995 FBLN2P98095 1184 aa17.32■□□□□ 0.36
PTCD2-204ENST00000486995 MYT1Q01538 1121 aa17.31■□□□□ 0.36
PTCD2-204ENST00000486995 JPH4Q96JJ6 628 aa17.31■□□□□ 0.36
PTCD2-204ENST00000486995 NUP160Q12769 1436 aa17.31■□□□□ 0.36
PTCD2-204ENST00000486995 WASHC2AQ641Q2 1341 aa17.31■□□□□ 0.36
PTCD2-204ENST00000486995 CFDP1Q9UEE9 299 aaPredicted RBP17.3■□□□□ 0.36
PTCD2-204ENST00000486995 GPATCH8Q9UKJ3 1502 aaKnown RBP17.3■□□□□ 0.36
PTCD2-204ENST00000486995 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
PTCD2-204ENST00000486995 RPRD2Q5VT52 1461 aaKnown RBP17.29■□□□□ 0.36
PTCD2-204ENST00000486995 CARMIL2Q6F5E8 1435 aa17.29■□□□□ 0.36
PTCD2-204ENST00000486995 CAMSAP2Q08AD1 1489 aa17.29■□□□□ 0.36
PTCD2-204ENST00000486995 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
PTCD2-204ENST00000486995 NCOA1Q15788 1441 aa17.26■□□□□ 0.35
PTCD2-204ENST00000486995 KIF14Q15058 1648 aa17.26■□□□□ 0.35
PTCD2-204ENST00000486995 ADCY10Q96PN6 1610 aa17.25■□□□□ 0.35
PTCD2-204ENST00000486995 TEX14Q8IWB6 1497 aa17.25■□□□□ 0.35
PTCD2-204ENST00000486995 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
PTCD2-204ENST00000486995 ITSN2Q9NZM3 1697 aa17.24■□□□□ 0.35
PTCD2-204ENST00000486995 PZPP20742 1482 aa17.23■□□□□ 0.35
PTCD2-204ENST00000486995 ZNF777Q9ULD5 760 aaPredicted RBP17.23■□□□□ 0.35
PTCD2-204ENST00000486995 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
PTCD2-204ENST00000486995 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.35
PTCD2-204ENST00000486995 FKBP8Q14318 412 aa17.2■□□□□ 0.34
PTCD2-204ENST00000486995 ABCA8O94911 1581 aa17.2■□□□□ 0.34
PTCD2-204ENST00000486995 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
PTCD2-204ENST00000486995 ADGBQ8N7X0 1667 aa17.19■□□□□ 0.34
PTCD2-204ENST00000486995 ATP10BO94823 1461 aa17.18■□□□□ 0.34
PTCD2-204ENST00000486995 CNTLNQ9NXG0 1405 aa17.17■□□□□ 0.34
PTCD2-204ENST00000486995 CCDC7Q96M83 1385 aa17.17■□□□□ 0.34
PTCD2-204ENST00000486995 ANKRD30AQ9BXX3 1397 aa17.17■□□□□ 0.34
PTCD2-204ENST00000486995 SPATA31E1Q6ZUB1 1445 aa17.17■□□□□ 0.34
PTCD2-204ENST00000486995 CROCC2H7BZ55 1655 aa17.17■□□□□ 0.34
PTCD2-204ENST00000486995 ABCC10Q5T3U5 1492 aa17.17■□□□□ 0.34
PTCD2-204ENST00000486995 KIAA1107Q9UPP5 1409 aa17.15■□□□□ 0.34
PTCD2-204ENST00000486995 BCANQ96GW7 911 aa17.15■□□□□ 0.34
PTCD2-204ENST00000486995 ANKRD50Q9ULJ7 1429 aa17.14■□□□□ 0.33
PTCD2-204ENST00000486995 CDC42BPAQ5VT25 1732 aa17.13■□□□□ 0.33
PTCD2-204ENST00000486995 PKD2Q13563 968 aa17.13■□□□□ 0.33
PTCD2-204ENST00000486995 TSHZ2Q9NRE2 1034 aa17.13■□□□□ 0.33
PTCD2-204ENST00000486995 MBD5Q9P267 1494 aa17.11■□□□□ 0.33
PTCD2-204ENST00000486995 HNRNPUQ00839 825 aaKnown RBP eCLIP17.11■□□□□ 0.33
PTCD2-204ENST00000486995 SHANK2Q9UPX8 1470 aa17.1■□□□□ 0.33
PTCD2-204ENST00000486995 NEFLP07196 543 aa17.1■□□□□ 0.33
PTCD2-204ENST00000486995 KIF7Q2M1P5 1343 aa17.1■□□□□ 0.33
PTCD2-204ENST00000486995 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
PTCD2-204ENST00000486995 C9orf84Q5VXU9 1444 aa17.1■□□□□ 0.33
PTCD2-204ENST00000486995 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
PTCD2-204ENST00000486995 PTPRGP23470 1445 aa17.08■□□□□ 0.32
PTCD2-204ENST00000486995 TSPY4P0CV99 314 aa17.06■□□□□ 0.32
PTCD2-204ENST00000486995 TSPY10P0CW01 314 aa17.06■□□□□ 0.32
PTCD2-204ENST00000486995 NUP155O75694 1391 aa17.06■□□□□ 0.32
PTCD2-204ENST00000486995 HNRNPMP52272 730 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTCD2-204ENST00000486995 POLR1AO95602 1720 aaPredicted RBP17.03■□□□□ 0.32
PTCD2-204ENST00000486995 KDM5DQ9BY66 1539 aa17.02■□□□□ 0.32
PTCD2-204ENST00000486995 ARHGEF5Q12774 1597 aa17.02■□□□□ 0.31
PTCD2-204ENST00000486995 KIF15Q9NS87 1388 aa17.02■□□□□ 0.31
PTCD2-204ENST00000486995 USP47Q96K76 1375 aa17.01■□□□□ 0.31
PTCD2-204ENST00000486995 ZNF326Q5BKZ1 582 aaKnown RBP17.01■□□□□ 0.31
PTCD2-204ENST00000486995 UHRF1BP1Q6BDS2 1440 aa17.01■□□□□ 0.31
PTCD2-204ENST00000486995 MRS2Q9HD23 443 aa17■□□□□ 0.31
PTCD2-204ENST00000486995 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
PTCD2-204ENST00000486995 FAM9BQ8IZU0 186 aa16.98■□□□□ 0.31
PTCD2-204ENST00000486995 BCORL1Q5H9F3 1711 aa16.97■□□□□ 0.31
PTCD2-204ENST00000486995 KDM5CP41229 1560 aa16.97■□□□□ 0.31
PTCD2-204ENST00000486995 CCDC141Q6ZP82 1450 aa16.97■□□□□ 0.31
PTCD2-204ENST00000486995 DHX29Q7Z478 1369 aaKnown RBP16.97■□□□□ 0.31
PTCD2-204ENST00000486995 RSPH4AQ5TD94 716 aa16.97■□□□□ 0.31
PTCD2-204ENST00000486995 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.31
PTCD2-204ENST00000486995 PREX2Q70Z35 1606 aa16.96■□□□□ 0.3
PTCD2-204ENST00000486995 ARHGEF12Q9NZN5 1544 aa16.95■□□□□ 0.3
PTCD2-204ENST00000486995 RALGAPBQ86X10 1494 aa16.95■□□□□ 0.3
PTCD2-204ENST00000486995 ARID4BQ4LE39 1312 aaPredicted RBP16.95■□□□□ 0.3
PTCD2-204ENST00000486995 CHD1O14646 1710 aa16.93■□□□□ 0.3
PTCD2-204ENST00000486995 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
PTCD2-204ENST00000486995 CARD11Q9BXL7 1154 aa16.92■□□□□ 0.3
PTCD2-204ENST00000486995 ZBED9Q6R2W3 1325 aa16.91■□□□□ 0.3
PTCD2-204ENST00000486995 KDM2AQ9Y2K7 1162 aa16.91■□□□□ 0.3
PTCD2-204ENST00000486995 FAM135AQ9P2D6 1515 aa16.91■□□□□ 0.3
PTCD2-204ENST00000486995 DCAF11Q8TEB1 546 aa16.9■□□□□ 0.3
PTCD2-204ENST00000486995 POLR3GLQ9BT43 218 aa16.9■□□□□ 0.3
PTCD2-204ENST00000486995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.89■□□□□ 0.29
PTCD2-204ENST00000486995 TTC37Q6PGP7 1564 aa16.89■□□□□ 0.29
PTCD2-204ENST00000486995 SYCP2Q9BX26 1530 aa16.89■□□□□ 0.29
PTCD2-204ENST00000486995 IRX6P78412 446 aaPredicted RBP16.89■□□□□ 0.29
PTCD2-204ENST00000486995 ARHGAP5Q13017 1502 aa16.87■□□□□ 0.29
PTCD2-204ENST00000486995 ERCC6L2Q5T890 1561 aa16.87■□□□□ 0.29
PTCD2-204ENST00000486995 MAST1Q9Y2H9 1570 aa16.87■□□□□ 0.29
PTCD2-204ENST00000486995 ROCK2O75116 1388 aaKnown RBP16.87■□□□□ 0.29
PTCD2-204ENST00000486995 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
PTCD2-204ENST00000486995 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms