RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, human

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRD-215	ENST00000485883	KIF14	Q15058	1648 aa		33.43	■■■□□ 2.94
CHRD-215	ENST00000485883	EFCAB2	Q5VUJ9	269 aa		33.42	■■■□□ 2.94
CHRD-215	ENST00000485883	MAGI2	Q86UL8	1455 aa		33.42	■■■□□ 2.94
CHRD-215	ENST00000485883	TRO	Q12816	1431 aa	Predicted RBP	33.41	■■■□□ 2.94
CHRD-215	ENST00000485883	RIMS1	Q86UR5	1692 aa	Known RBP	33.41	■■■□□ 2.94
CHRD-215	ENST00000485883	MLEC	Q14165	292 aa		33.38	■■■□□ 2.93
CHRD-215	ENST00000485883	PLPPR3	Q6T4P5	718 aa		33.38	■■■□□ 2.93
CHRD-215	ENST00000485883	LRRIQ1	Q96JM4	1722 aa		33.37	■■■□□ 2.93
CHRD-215	ENST00000485883	MYO5C	Q9NQX4	1742 aa		33.37	■■■□□ 2.93
CHRD-215	ENST00000485883	LMTK3	Q96Q04	1460 aa		33.35	■■■□□ 2.93
CHRD-215	ENST00000485883	PCF11	O94913	1555 aa	Known RBP	33.34	■■■□□ 2.93
CHRD-215	ENST00000485883	CLIP1	P30622	1438 aa		33.31	■■■□□ 2.92
CHRD-215	ENST00000485883	ARHGAP5	Q13017	1502 aa		33.3	■■■□□ 2.92
CHRD-215	ENST00000485883	AFAP1	Q8N556	730 aa		33.28	■■■□□ 2.92
CHRD-215	ENST00000485883	ATP10A	O60312	1499 aa		33.28	■■■□□ 2.92
CHRD-215	ENST00000485883	CASKIN1	Q8WXD9	1431 aa		33.26	■■■□□ 2.91
CHRD-215	ENST00000485883	C9orf84	Q5VXU9	1444 aa		33.25	■■■□□ 2.91
CHRD-215	ENST00000485883	HSPA2	P54652	639 aa		33.24	■■■□□ 2.91
CHRD-215	ENST00000485883	ZNF518A	Q6AHZ1	1483 aa		33.23	■■■□□ 2.91
CHRD-215	ENST00000485883	CCDC18	Q5T9S5	1454 aa		33.18	■■■□□ 2.9
CHRD-215	ENST00000485883	KDM5C	P41229	1560 aa		33.18	■■■□□ 2.9
CHRD-215	ENST00000485883	CDC42BPB	Q9Y5S2	1711 aa		33.18	■■■□□ 2.9
CHRD-215	ENST00000485883	FER1L4	A9Z1Z3	1794 aa		33.18	■■■□□ 2.9
CHRD-215	ENST00000485883	ARHGEF12	Q9NZN5	1544 aa		33.18	■■■□□ 2.9
CHRD-215	ENST00000485883	MYT1L	Q9UL68	1186 aa		33.16	■■■□□ 2.9
CHRD-215	ENST00000485883	TRAPPC8	Q9Y2L5	1435 aa		33.12	■■■□□ 2.89
CHRD-215	ENST00000485883	PREX2	Q70Z35	1606 aa		33.11	■■■□□ 2.89
CHRD-215	ENST00000485883	CEBPA	P49715	358 aa	Predicted RBP	33.11	■■■□□ 2.89
CHRD-215	ENST00000485883	FBXO41	Q8TF61	875 aa		33.11	■■■□□ 2.89
CHRD-215	ENST00000485883	FYCO1	Q9BQS8	1478 aa		33.09	■■■□□ 2.89
CHRD-215	ENST00000485883	DIP2C	Q9Y2E4	1556 aa		33.09	■■■□□ 2.89
CHRD-215	ENST00000485883	ABCC1	P33527	1531 aa		33.07	■■■□□ 2.89
CHRD-215	ENST00000485883	MLH3	Q9UHC1	1453 aa		33.06	■■■□□ 2.88
CHRD-215	ENST00000485883	ABCA6	Q8N139	1617 aa		33.04	■■■□□ 2.88
CHRD-215	ENST00000485883	CDC42BPA	Q5VT25	1732 aa		33.02	■■■□□ 2.88
CHRD-215	ENST00000485883	ITSN2	Q9NZM3	1697 aa		33.01	■■■□□ 2.87
CHRD-215	ENST00000485883	ZNF777	Q9ULD5	760 aa	Predicted RBP	33	■■■□□ 2.87
CHRD-215	ENST00000485883	RERE	Q9P2R6	1566 aa		32.99	■■■□□ 2.87
CHRD-215	ENST00000485883	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.96	■■■□□ 2.87
CHRD-215	ENST00000485883	KIDINS220	Q9ULH0	1771 aa		32.93	■■■□□ 2.86
CHRD-215	ENST00000485883	AGL	P35573	1532 aa		32.92	■■■□□ 2.86
CHRD-215	ENST00000485883	SAMD9L	Q8IVG5	1584 aa		32.92	■■■□□ 2.86
CHRD-215	ENST00000485883	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.9	■■■□□ 2.86
CHRD-215	ENST00000485883	PREX1	Q8TCU6	1659 aa		32.9	■■■□□ 2.86
CHRD-215	ENST00000485883	SYCP2	Q9BX26	1530 aa		32.88	■■■□□ 2.85
CHRD-215	ENST00000485883	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.84	■■■□□ 2.85
CHRD-215	ENST00000485883	UHRF1BP1	Q6BDS2	1440 aa		32.84	■■■□□ 2.85
CHRD-215	ENST00000485883	SPAG9	O60271	1321 aa	Known RBP	32.83	■■■□□ 2.85
CHRD-215	ENST00000485883	ESF1	Q9H501	851 aa	Known RBP	32.83	■■■□□ 2.85
CHRD-215	ENST00000485883	MTUS2	Q5JR59	1369 aa		32.82	■■■□□ 2.84
CHRD-215	ENST00000485883	CCNB3	Q8WWL7	1395 aa		32.82	■■■□□ 2.84
CHRD-215	ENST00000485883	C3	P01024	1663 aa		32.82	■■■□□ 2.84
CHRD-215	ENST00000485883	CERK	Q8TCT0	537 aa		32.8	■■■□□ 2.84
CHRD-215	ENST00000485883	SETD1B	Q9UPS6	1966 aa	Known RBP	32.79	■■■□□ 2.84
CHRD-215	ENST00000485883	KIAA1107	Q9UPP5	1409 aa		32.78	■■■□□ 2.84
CHRD-215	ENST00000485883	STRC	Q7RTU9	1775 aa		32.75	■■■□□ 2.83
CHRD-215	ENST00000485883	ZNF644	Q9H582	1327 aa	Predicted RBP	32.74	■■■□□ 2.83
CHRD-215	ENST00000485883	PLEKHH2	Q8IVE3	1493 aa		32.73	■■■□□ 2.83
CHRD-215	ENST00000485883	ATP7A	Q04656	1500 aa		32.72	■■■□□ 2.83
CHRD-215	ENST00000485883	CNTLN	Q9NXG0	1405 aa		32.72	■■■□□ 2.83
CHRD-215	ENST00000485883	CEP162	Q5TB80	1403 aa		32.71	■■■□□ 2.83
CHRD-215	ENST00000485883	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.68	■■■□□ 2.82
CHRD-215	ENST00000485883	INO80	Q9ULG1	1556 aa	Predicted RBP	32.68	■■■□□ 2.82
CHRD-215	ENST00000485883	DMRT2	Q9Y5R5	561 aa		32.68	■■■□□ 2.82
CHRD-215	ENST00000485883	TIAM1	Q13009	1591 aa		32.67	■■■□□ 2.82
CHRD-215	ENST00000485883	ZMYM3	Q14202	1370 aa		32.66	■■■□□ 2.82
CHRD-215	ENST00000485883	A2M	P01023	1474 aa		32.66	■■■□□ 2.82
CHRD-215	ENST00000485883	EHBP1L1	Q8N3D4	1523 aa		32.66	■■■□□ 2.82
CHRD-215	ENST00000485883	PLXNC1	O60486	1568 aa		32.64	■■■□□ 2.82
CHRD-215	ENST00000485883	MBD5	Q9P267	1494 aa		32.61	■■■□□ 2.81
CHRD-215	ENST00000485883	GGT6	Q6P531	493 aa		32.61	■■■□□ 2.81
CHRD-215	ENST00000485883	MROH2A	A6NES4	1674 aa		32.59	■■■□□ 2.81
CHRD-215	ENST00000485883	NPAT	Q14207	1427 aa		32.58	■■■□□ 2.81
CHRD-215	ENST00000485883	PTPRT	O14522	1441 aa		32.57	■■■□□ 2.8
CHRD-215	ENST00000485883	CLTC	Q00610	1675 aa	Known RBP	32.55	■■■□□ 2.8
CHRD-215	ENST00000485883	NCOA1	Q15788	1441 aa		32.54	■■■□□ 2.8
CHRD-215	ENST00000485883	NCOA2	Q15596	1464 aa		32.51	■■■□□ 2.79
CHRD-215	ENST00000485883	LOC105371045	A0A1W2PR82	267 aa		32.49	■■■□□ 2.79
CHRD-215	ENST00000485883	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.49	■■■□□ 2.79
CHRD-215	ENST00000485883	PTPRK	Q15262	1439 aa		32.49	■■■□□ 2.79
CHRD-215	ENST00000485883	ADGB	Q8N7X0	1667 aa		32.49	■■■□□ 2.79
CHRD-215	ENST00000485883	CAMSAP1	Q5T5Y3	1602 aa		32.48	■■■□□ 2.79
CHRD-215	ENST00000485883	DHX29	Q7Z478	1369 aa	Known RBP	32.45	■■■□□ 2.79
CHRD-215	ENST00000485883	PPP6R1	Q9UPN7	881 aa		32.44	■■■□□ 2.78
CHRD-215	ENST00000485883	NCKAP5L	Q9HCH0	1330 aa		32.44	■■■□□ 2.78
CHRD-215	ENST00000485883	CAMSAP2	Q08AD1	1489 aa		32.43	■■■□□ 2.78
CHRD-215	ENST00000485883	CCDC141	Q6ZP82	1450 aa		32.42	■■■□□ 2.78
CHRD-215	ENST00000485883	LTBP4	Q8N2S1	1624 aa		32.41	■■■□□ 2.78
CHRD-215	ENST00000485883	MYO3A	Q8NEV4	1616 aa		32.4	■■■□□ 2.78
CHRD-215	ENST00000485883	KIF3B	O15066	747 aa		32.39	■■■□□ 2.78
CHRD-215	ENST00000485883	VPS8	Q8N3P4	1428 aa		32.36	■■■□□ 2.77
CHRD-215	ENST00000485883	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.36	■■■□□ 2.77
CHRD-215	ENST00000485883	RSPH4A	Q5TD94	716 aa		32.35	■■■□□ 2.77
CHRD-215	ENST00000485883	ZNF142	P52746	1687 aa	Predicted RBP	32.34	■■■□□ 2.77
CHRD-215	ENST00000485883	LRRC9	Q6ZRR7	1453 aa		32.33	■■■□□ 2.77
CHRD-215	ENST00000485883	PLA2R1	Q13018	1463 aa		32.31	■■■□□ 2.76
CHRD-215	ENST00000485883	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.31	■■■□□ 2.76
CHRD-215	ENST00000485883	PKD2	Q13563	968 aa		32.3	■■■□□ 2.76
CHRD-215	ENST00000485883	KANK4	Q5T7N3	995 aa	Predicted RBP	32.3	■■■□□ 2.76
CHRD-215	ENST00000485883	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.29	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms