RNA–Protein interactions for RNA: ENST00000485589.1

NPDC1-204, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 506 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-204ENST00000485589 ZFYVE16Q7Z3T8 1539 aa29.02■■■□□ 2.24
NPDC1-204ENST00000485589 TROQ12816 1431 aaPredicted RBP29■■■□□ 2.23
NPDC1-204ENST00000485589 POGZQ7Z3K3 1410 aa28.99■■■□□ 2.23
NPDC1-204ENST00000485589 SCAPERQ9BY12 1400 aa28.97■■■□□ 2.23
NPDC1-204ENST00000485589 PREX2Q70Z35 1606 aa28.94■■■□□ 2.22
NPDC1-204ENST00000485589 CDC42BPAQ5VT25 1732 aa28.94■■■□□ 2.22
NPDC1-204ENST00000485589 CASKIN1Q8WXD9 1431 aa28.94■■■□□ 2.22
NPDC1-204ENST00000485589 FER1L4A9Z1Z3 1794 aa28.93■■■□□ 2.22
NPDC1-204ENST00000485589 ARID4BQ4LE39 1312 aaPredicted RBP28.92■■■□□ 2.22
NPDC1-204ENST00000485589 MAGI2Q86UL8 1455 aa28.91■■■□□ 2.22
NPDC1-204ENST00000485589 ARHGAP5Q13017 1502 aa28.9■■■□□ 2.22
NPDC1-204ENST00000485589 KDM5CP41229 1560 aa28.88■■■□□ 2.21
NPDC1-204ENST00000485589 CCDC18Q5T9S5 1454 aa28.88■■■□□ 2.21
NPDC1-204ENST00000485589 ITSN2Q9NZM3 1697 aa28.87■■■□□ 2.21
NPDC1-204ENST00000485589 CDK11AQ9UQ88 783 aaPredicted RBP28.87■■■□□ 2.21
NPDC1-204ENST00000485589 CLIP1P30622 1438 aa28.86■■■□□ 2.21
NPDC1-204ENST00000485589 FYCO1Q9BQS8 1478 aa28.85■■■□□ 2.21
NPDC1-204ENST00000485589 EFCAB2Q5VUJ9 269 aa28.83■■■□□ 2.21
NPDC1-204ENST00000485589 LMTK3Q96Q04 1460 aa28.82■■■□□ 2.2
NPDC1-204ENST00000485589 ABCA6Q8N139 1617 aa28.81■■■□□ 2.2
NPDC1-204ENST00000485589 ABCC1P33527 1531 aa28.81■■■□□ 2.2
NPDC1-204ENST00000485589 ARHGEF12Q9NZN5 1544 aa28.81■■■□□ 2.2
NPDC1-204ENST00000485589 DIP2CQ9Y2E4 1556 aa28.8■■■□□ 2.2
NPDC1-204ENST00000485589 ZNF518AQ6AHZ1 1483 aa28.79■■■□□ 2.2
NPDC1-204ENST00000485589 ATP10AO60312 1499 aa28.78■■■□□ 2.2
NPDC1-204ENST00000485589 ILDR1Q86SU0 546 aaPredicted RBP28.78■■■□□ 2.2
NPDC1-204ENST00000485589 C9orf84Q5VXU9 1444 aa28.77■■■□□ 2.2
NPDC1-204ENST00000485589 KIDINS220Q9ULH0 1771 aa28.75■■■□□ 2.19
NPDC1-204ENST00000485589 AFAP1Q8N556 730 aa28.74■■■□□ 2.19
NPDC1-204ENST00000485589 SAMD9LQ8IVG5 1584 aa28.73■■■□□ 2.19
NPDC1-204ENST00000485589 TRAPPC8Q9Y2L5 1435 aa28.72■■■□□ 2.19
NPDC1-204ENST00000485589 MLECQ14165 292 aa28.72■■■□□ 2.19
NPDC1-204ENST00000485589 REREQ9P2R6 1566 aa28.7■■■□□ 2.18
NPDC1-204ENST00000485589 MLH3Q9UHC1 1453 aa28.66■■■□□ 2.18
NPDC1-204ENST00000485589 PLPPR3Q6T4P5 718 aa28.66■■■□□ 2.18
NPDC1-204ENST00000485589 GPATCH8Q9UKJ3 1502 aaKnown RBP28.64■■■□□ 2.17
NPDC1-204ENST00000485589 PREX1Q8TCU6 1659 aa28.63■■■□□ 2.17
NPDC1-204ENST00000485589 SYCP2Q9BX26 1530 aa28.63■■■□□ 2.17
NPDC1-204ENST00000485589 C3P01024 1663 aa28.61■■■□□ 2.17
NPDC1-204ENST00000485589 HSPA2P54652 639 aa28.57■■■□□ 2.16
NPDC1-204ENST00000485589 AGLP35573 1532 aa28.56■■■□□ 2.16
NPDC1-204ENST00000485589 TIAM1Q13009 1591 aa28.56■■■□□ 2.16
NPDC1-204ENST00000485589 CEP162Q5TB80 1403 aa28.55■■■□□ 2.16
NPDC1-204ENST00000485589 SUPT6HQ7KZ85 1726 aaKnown RBP28.54■■■□□ 2.16
NPDC1-204ENST00000485589 INO80Q9ULG1 1556 aaPredicted RBP28.53■■■□□ 2.16
NPDC1-204ENST00000485589 SETD1BQ9UPS6 1966 aaKnown RBP28.52■■■□□ 2.16
NPDC1-204ENST00000485589 CEBPAP49715 358 aaPredicted RBP28.52■■■□□ 2.16
NPDC1-204ENST00000485589 MYT1LQ9UL68 1186 aa28.51■■■□□ 2.15
NPDC1-204ENST00000485589 EHBP1L1Q8N3D4 1523 aa28.5■■■□□ 2.15
NPDC1-204ENST00000485589 STRCQ7RTU9 1775 aa28.5■■■□□ 2.15
NPDC1-204ENST00000485589 ZNF777Q9ULD5 760 aaPredicted RBP28.49■■■□□ 2.15
NPDC1-204ENST00000485589 ATP7AQ04656 1500 aa28.47■■■□□ 2.15
NPDC1-204ENST00000485589 MTUS2Q5JR59 1369 aa28.46■■■□□ 2.15
NPDC1-204ENST00000485589 HNRNPMP52272 730 aaKnown RBP eCLIP28.45■■■□□ 2.14
NPDC1-204ENST00000485589 PLXNC1O60486 1568 aa28.45■■■□□ 2.14
NPDC1-204ENST00000485589 CCNB3Q8WWL7 1395 aa28.43■■■□□ 2.14
NPDC1-204ENST00000485589 MROH2AA6NES4 1674 aa28.42■■■□□ 2.14
NPDC1-204ENST00000485589 KIAA1107Q9UPP5 1409 aa28.42■■■□□ 2.14
NPDC1-204ENST00000485589 CLTCQ00610 1675 aaKnown RBP28.39■■■□□ 2.14
NPDC1-204ENST00000485589 ADGBQ8N7X0 1667 aa28.39■■■□□ 2.14
NPDC1-204ENST00000485589 PLEKHH2Q8IVE3 1493 aa28.39■■■□□ 2.13
NPDC1-204ENST00000485589 CFDP1Q9UEE9 299 aaPredicted RBP28.38■■■□□ 2.13
NPDC1-204ENST00000485589 ZNF644Q9H582 1327 aaPredicted RBP28.38■■■□□ 2.13
NPDC1-204ENST00000485589 MBD5Q9P267 1494 aa28.36■■■□□ 2.13
NPDC1-204ENST00000485589 SPAG9O60271 1321 aaKnown RBP28.36■■■□□ 2.13
NPDC1-204ENST00000485589 UHRF1BP1Q6BDS2 1440 aa28.32■■■□□ 2.12
NPDC1-204ENST00000485589 NCOA2Q15596 1464 aa28.32■■■□□ 2.12
NPDC1-204ENST00000485589 LOC105371045A0A1W2PR82 267 aa28.31■■■□□ 2.12
NPDC1-204ENST00000485589 FBXO41Q8TF61 875 aa28.31■■■□□ 2.12
NPDC1-204ENST00000485589 A2MP01023 1474 aa28.31■■■□□ 2.12
NPDC1-204ENST00000485589 CNTLNQ9NXG0 1405 aa28.26■■■□□ 2.12
NPDC1-204ENST00000485589 CAMSAP2Q08AD1 1489 aa28.26■■■□□ 2.11
NPDC1-204ENST00000485589 VPS8Q8N3P4 1428 aa28.24■■■□□ 2.11
NPDC1-204ENST00000485589 MYO3AQ8NEV4 1616 aa28.21■■■□□ 2.11
NPDC1-204ENST00000485589 ZNF142P52746 1687 aaPredicted RBP28.21■■■□□ 2.11
NPDC1-204ENST00000485589 LRRC9Q6ZRR7 1453 aa28.19■■■□□ 2.1
NPDC1-204ENST00000485589 ESF1Q9H501 851 aaKnown RBP28.18■■■□□ 2.1
NPDC1-204ENST00000485589 ZMYM3Q14202 1370 aa28.18■■■□□ 2.1
NPDC1-204ENST00000485589 RTEL1-TNFRSF6BF6WH68 1400 aa28.18■■■□□ 2.1
NPDC1-204ENST00000485589 CCDC141Q6ZP82 1450 aa28.17■■■□□ 2.1
NPDC1-204ENST00000485589 ARHGEF5Q12774 1597 aa28.16■■■□□ 2.1
NPDC1-204ENST00000485589 NPATQ14207 1427 aa28.16■■■□□ 2.1
NPDC1-204ENST00000485589 CAMSAP1Q5T5Y3 1602 aa28.14■■■□□ 2.09
NPDC1-204ENST00000485589 PTPRKQ15262 1439 aa28.12■■■□□ 2.09
NPDC1-204ENST00000485589 NCOA1Q15788 1441 aa28.11■■■□□ 2.09
NPDC1-204ENST00000485589 GGT6Q6P531 493 aa28.11■■■□□ 2.09
NPDC1-204ENST00000485589 CERKQ8TCT0 537 aa28.11■■■□□ 2.09
NPDC1-204ENST00000485589 MAP3K1Q13233 1512 aa28.09■■■□□ 2.09
NPDC1-204ENST00000485589 CEP170BQ9Y4F5 1589 aaPredicted RBP28.09■■■□□ 2.09
NPDC1-204ENST00000485589 DHX29Q7Z478 1369 aaKnown RBP28.09■■■□□ 2.09
NPDC1-204ENST00000485589 KANK4Q5T7N3 995 aaPredicted RBP28.08■■■□□ 2.09
NPDC1-204ENST00000485589 PTPRTO14522 1441 aa28.08■■■□□ 2.09
NPDC1-204ENST00000485589 LTBP4Q8N2S1 1624 aa28.05■■■□□ 2.08
NPDC1-204ENST00000485589 MAST1Q9Y2H9 1570 aa28.05■■■□□ 2.08
NPDC1-204ENST00000485589 KDM5DQ9BY66 1539 aa28.01■■■□□ 2.07
NPDC1-204ENST00000485589 DNMT1P26358 1616 aaKnown RBP28■■■□□ 2.07
NPDC1-204ENST00000485589 RNF17Q9BXT8 1623 aaKnown RBP28■■■□□ 2.07
NPDC1-204ENST00000485589 DMRT2Q9Y5R5 561 aa28■■■□□ 2.07
NPDC1-204ENST00000485589 CROCC2H7BZ55 1655 aa28■■■□□ 2.07
NPDC1-204ENST00000485589 KIF3BO15066 747 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms