RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 EFCAB2Q5VUJ9 269 aa41.88■■■■■ 4.29
HLA-F-227ENST00000485513 PTPRMP28827 1452 aa41.87■■■■■ 4.29
HLA-F-227ENST00000485513 POGZQ7Z3K3 1410 aa41.86■■■■■ 4.29
HLA-F-227ENST00000485513 ZFYVE16Q7Z3T8 1539 aa41.85■■■■■ 4.29
HLA-F-227ENST00000485513 MAGI2Q86UL8 1455 aa41.85■■■■■ 4.29
HLA-F-227ENST00000485513 CCDC18Q5T9S5 1454 aa41.83■■■■■ 4.29
HLA-F-227ENST00000485513 YEATS2Q9ULM3 1422 aa41.82■■■■■ 4.29
HLA-F-227ENST00000485513 MADDQ8WXG6 1647 aa41.81■■■■■ 4.28
HLA-F-227ENST00000485513 ARHGAP5Q13017 1502 aa41.77■■■■■ 4.28
HLA-F-227ENST00000485513 FYCO1Q9BQS8 1478 aa41.74■■■■■ 4.27
HLA-F-227ENST00000485513 SIGLEC1Q9BZZ2 1709 aa41.69■■■■■ 4.27
HLA-F-227ENST00000485513 RIMS1Q86UR5 1692 aaKnown RBP41.68■■■■■ 4.26
HLA-F-227ENST00000485513 CDC42BPBQ9Y5S2 1711 aa41.66■■■■■ 4.26
HLA-F-227ENST00000485513 ZNF518AQ6AHZ1 1483 aa41.66■■■■■ 4.26
HLA-F-227ENST00000485513 PREX2Q70Z35 1606 aa41.62■■■■■ 4.25
HLA-F-227ENST00000485513 ATP10AO60312 1499 aa41.62■■■■■ 4.25
HLA-F-227ENST00000485513 AFAP1Q8N556 730 aa41.59■■■■■ 4.25
HLA-F-227ENST00000485513 C9orf84Q5VXU9 1444 aa41.58■■■■■ 4.25
HLA-F-227ENST00000485513 KDM5CP41229 1560 aa41.58■■■■■ 4.25
HLA-F-227ENST00000485513 MLECQ14165 292 aa41.56■■■■■ 4.24
HLA-F-227ENST00000485513 CDC42BPAQ5VT25 1732 aa41.52■■■■■ 4.24
HLA-F-227ENST00000485513 ABCC1P33527 1531 aa41.5■■■■■ 4.23
HLA-F-227ENST00000485513 MYT1LQ9UL68 1186 aa41.5■■■■■ 4.23
HLA-F-227ENST00000485513 FER1L4A9Z1Z3 1794 aa41.49■■■■■ 4.23
HLA-F-227ENST00000485513 ARHGEF12Q9NZN5 1544 aa41.45■■■■■ 4.23
HLA-F-227ENST00000485513 PLPPR3Q6T4P5 718 aa41.45■■■■■ 4.23
HLA-F-227ENST00000485513 ITSN2Q9NZM3 1697 aa41.45■■■■■ 4.23
HLA-F-227ENST00000485513 LMTK3Q96Q04 1460 aa41.44■■■■■ 4.22
HLA-F-227ENST00000485513 TRAPPC8Q9Y2L5 1435 aa41.44■■■■■ 4.22
HLA-F-227ENST00000485513 DIP2CQ9Y2E4 1556 aa41.42■■■■■ 4.22
HLA-F-227ENST00000485513 MLH3Q9UHC1 1453 aa41.42■■■■■ 4.22
HLA-F-227ENST00000485513 ILDR1Q86SU0 546 aaPredicted RBP41.41■■■■■ 4.22
HLA-F-227ENST00000485513 GPATCH8Q9UKJ3 1502 aaKnown RBP41.37■■■■■ 4.21
HLA-F-227ENST00000485513 ABCA6Q8N139 1617 aa41.36■■■■■ 4.21
HLA-F-227ENST00000485513 CEP162Q5TB80 1403 aa41.35■■■■■ 4.21
HLA-F-227ENST00000485513 REREQ9P2R6 1566 aa41.35■■■■■ 4.21
HLA-F-227ENST00000485513 ZNF777Q9ULD5 760 aaPredicted RBP41.35■■■■■ 4.21
HLA-F-227ENST00000485513 MTUS2Q5JR59 1369 aa41.33■■■■■ 4.21
HLA-F-227ENST00000485513 SAMD9LQ8IVG5 1584 aa41.32■■■■■ 4.2
HLA-F-227ENST00000485513 KIDINS220Q9ULH0 1771 aa41.27■■■■■ 4.2
HLA-F-227ENST00000485513 CCNB3Q8WWL7 1395 aa41.27■■■■■ 4.2
HLA-F-227ENST00000485513 SYCP2Q9BX26 1530 aa41.25■■■■■ 4.19
HLA-F-227ENST00000485513 CFDP1Q9UEE9 299 aaPredicted RBP41.24■■■■■ 4.19
HLA-F-227ENST00000485513 AGLP35573 1532 aa41.22■■■■■ 4.19
HLA-F-227ENST00000485513 HSPA2P54652 639 aa41.21■■■■■ 4.19
HLA-F-227ENST00000485513 HNRNPMP52272 730 aaKnown RBP eCLIP41.2■■■■■ 4.19
HLA-F-227ENST00000485513 PLEKHH2Q8IVE3 1493 aa41.19■■■■■ 4.18
HLA-F-227ENST00000485513 EHBP1L1Q8N3D4 1523 aa41.18■■■■■ 4.18
HLA-F-227ENST00000485513 CEBPAP49715 358 aaPredicted RBP41.18■■■■■ 4.18
HLA-F-227ENST00000485513 KIAA1107Q9UPP5 1409 aa41.18■■■■■ 4.18
HLA-F-227ENST00000485513 SPAG9O60271 1321 aaKnown RBP41.16■■■■■ 4.18
HLA-F-227ENST00000485513 TIAM1Q13009 1591 aa41.12■■■■■ 4.17
HLA-F-227ENST00000485513 PREX1Q8TCU6 1659 aa41.1■■■■■ 4.17
HLA-F-227ENST00000485513 ESF1Q9H501 851 aaKnown RBP41.08■■■■■ 4.17
HLA-F-227ENST00000485513 ATP7AQ04656 1500 aa41.06■■■■■ 4.16
HLA-F-227ENST00000485513 LOC105371045A0A1W2PR82 267 aa41.04■■■■■ 4.16
HLA-F-227ENST00000485513 INO80Q9ULG1 1556 aaPredicted RBP41.03■■■■■ 4.16
HLA-F-227ENST00000485513 C3P01024 1663 aa41.02■■■■■ 4.16
HLA-F-227ENST00000485513 SETD1BQ9UPS6 1966 aaKnown RBP41.01■■■■■ 4.16
HLA-F-227ENST00000485513 ZNF644Q9H582 1327 aaPredicted RBP41■■■■■ 4.15
HLA-F-227ENST00000485513 SUPT6HQ7KZ85 1726 aaKnown RBP40.97■■■■■ 4.15
HLA-F-227ENST00000485513 CNTLNQ9NXG0 1405 aa40.97■■■■■ 4.15
HLA-F-227ENST00000485513 UHRF1BP1Q6BDS2 1440 aa40.96■■■■■ 4.15
HLA-F-227ENST00000485513 A2MP01023 1474 aa40.94■■■■■ 4.14
HLA-F-227ENST00000485513 NCOA2Q15596 1464 aa40.93■■■■■ 4.14
HLA-F-227ENST00000485513 MBD5Q9P267 1494 aa40.92■■■■■ 4.14
HLA-F-227ENST00000485513 FBXO41Q8TF61 875 aa40.92■■■■■ 4.14
HLA-F-227ENST00000485513 VPS8Q8N3P4 1428 aa40.92■■■■■ 4.14
HLA-F-227ENST00000485513 PLXNC1O60486 1568 aa40.91■■■■■ 4.14
HLA-F-227ENST00000485513 ADGBQ8N7X0 1667 aa40.85■■■■■ 4.13
HLA-F-227ENST00000485513 MROH2AA6NES4 1674 aa40.85■■■■■ 4.13
HLA-F-227ENST00000485513 RTEL1-TNFRSF6BF6WH68 1400 aa40.81■■■■■ 4.12
HLA-F-227ENST00000485513 CAMSAP2Q08AD1 1489 aa40.8■■■■■ 4.12
HLA-F-227ENST00000485513 ZMYM3Q14202 1370 aa40.78■■■■■ 4.12
HLA-F-227ENST00000485513 LRRC9Q6ZRR7 1453 aa40.77■■■■■ 4.12
HLA-F-227ENST00000485513 STRCQ7RTU9 1775 aa40.77■■■■■ 4.12
HLA-F-227ENST00000485513 CCDC141Q6ZP82 1450 aa40.77■■■■■ 4.12
HLA-F-227ENST00000485513 GGT6Q6P531 493 aa40.76■■■■■ 4.12
HLA-F-227ENST00000485513 CLTCQ00610 1675 aaKnown RBP40.75■■■■■ 4.11
HLA-F-227ENST00000485513 NPATQ14207 1427 aa40.74■■■■■ 4.11
HLA-F-227ENST00000485513 DMRT2Q9Y5R5 561 aa40.73■■■■■ 4.11
HLA-F-227ENST00000485513 RSPH4AQ5TD94 716 aa40.72■■■■■ 4.11
HLA-F-227ENST00000485513 DHX29Q7Z478 1369 aaKnown RBP40.69■■■■■ 4.1
HLA-F-227ENST00000485513 MAP3K1Q13233 1512 aa40.68■■■■■ 4.1
HLA-F-227ENST00000485513 PPP6R1Q9UPN7 881 aa40.68■■■■■ 4.1
HLA-F-227ENST00000485513 CERKQ8TCT0 537 aa40.64■■■■■ 4.1
HLA-F-227ENST00000485513 ARHGEF5Q12774 1597 aa40.64■■■■■ 4.1
HLA-F-227ENST00000485513 KANK4Q5T7N3 995 aaPredicted RBP40.63■■■■■ 4.09
HLA-F-227ENST00000485513 PTPRKQ15262 1439 aa40.59■■■■■ 4.09
HLA-F-227ENST00000485513 TSPY4P0CV99 314 aa40.58■■■■■ 4.09
HLA-F-227ENST00000485513 TSPY10P0CW01 314 aa40.58■■■■■ 4.09
HLA-F-227ENST00000485513 PTPRTO14522 1441 aa40.57■■■■■ 4.08
HLA-F-227ENST00000485513 KIF3BO15066 747 aa40.56■■■■■ 4.08
HLA-F-227ENST00000485513 NCOA1Q15788 1441 aa40.55■■■■■ 4.08
HLA-F-227ENST00000485513 MYO3AQ8NEV4 1616 aa40.52■■■■■ 4.08
HLA-F-227ENST00000485513 CAMSAP1Q5T5Y3 1602 aa40.51■■■■■ 4.08
HLA-F-227ENST00000485513 MYOM3Q5VTT5 1437 aa40.5■■■■■ 4.07
HLA-F-227ENST00000485513 ZNF142P52746 1687 aaPredicted RBP40.49■■■■■ 4.07
HLA-F-227ENST00000485513 MIA2Q96PC5 1412 aa40.49■■■■■ 4.07
HLA-F-227ENST00000485513 CEP170BQ9Y4F5 1589 aaPredicted RBP40.44■■■■■ 4.06
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms