RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 CDK13Q14004 1512 aaKnown RBP13.1□□□□□ -0.31
USP16-206ENST00000485067 HECW1Q76N89 1606 aa13.09□□□□□ -0.31
USP16-206ENST00000485067 MIER1Q8N108 512 aa13.09□□□□□ -0.31
USP16-206ENST00000485067 FGD1P98174 961 aa13.08□□□□□ -0.32
USP16-206ENST00000485067 DISP1Q96F81 1524 aa13.08□□□□□ -0.32
USP16-206ENST00000485067 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
USP16-206ENST00000485067 FOXD4L1Q9NU39 408 aa13.08□□□□□ -0.32
USP16-206ENST00000485067 UGGT2Q9NYU1 1516 aa13.07□□□□□ -0.32
USP16-206ENST00000485067 CEP170Q5SW79 1584 aa13.07□□□□□ -0.32
USP16-206ENST00000485067 ERICH6BQ5W0A0 696 aa13.06□□□□□ -0.32
USP16-206ENST00000485067 PTPRKQ15262 1439 aa13.06□□□□□ -0.32
USP16-206ENST00000485067 MYOM3Q5VTT5 1437 aa13.06□□□□□ -0.32
USP16-206ENST00000485067 KIAA0586Q9BVV6 1533 aa13.06□□□□□ -0.32
USP16-206ENST00000485067 ARHGEF11O15085 1522 aa13.05□□□□□ -0.32
USP16-206ENST00000485067 CHMP7Q8WUX9 453 aaPredicted RBP13.05□□□□□ -0.32
USP16-206ENST00000485067 SALL2Q9Y467 1007 aaPredicted RBP13.05□□□□□ -0.32
USP16-206ENST00000485067 EPRSP07814 1512 aaKnown RBP13.04□□□□□ -0.32
USP16-206ENST00000485067 KIAA0556O60303 1618 aa13.04□□□□□ -0.32
USP16-206ENST00000485067 C14orf37Q86TY3 774 aa13.04□□□□□ -0.32
USP16-206ENST00000485067 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
USP16-206ENST00000485067 HFM1A2PYH4 1435 aa13.03□□□□□ -0.32
USP16-206ENST00000485067 PTPN23Q9H3S7 1636 aa13.02□□□□□ -0.32
USP16-206ENST00000485067 SYNJ2O15056 1496 aa13.02□□□□□ -0.32
USP16-206ENST00000485067 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.32
USP16-206ENST00000485067 TCOF1Q13428 1488 aaKnown RBP13□□□□□ -0.33
USP16-206ENST00000485067 SIN3AQ96ST3 1273 aa13□□□□□ -0.33
USP16-206ENST00000485067 CHMP4AQ9BY43 222 aa13□□□□□ -0.33
USP16-206ENST00000485067 NUP153P49790 1475 aaKnown RBP12.99□□□□□ -0.33
USP16-206ENST00000485067 UACAQ9BZF9 1416 aa12.99□□□□□ -0.33
USP16-206ENST00000485067 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
USP16-206ENST00000485067 CNKSR2Q8WXI2 1034 aa12.97□□□□□ -0.33
USP16-206ENST00000485067 MIA2Q96PC5 1412 aa12.97□□□□□ -0.33
USP16-206ENST00000485067 CHIC2Q9UKJ5 165 aa12.96□□□□□ -0.33
USP16-206ENST00000485067 NAIPQ13075 1403 aa12.96□□□□□ -0.34
USP16-206ENST00000485067 AKNAQ7Z591 1439 aa12.96□□□□□ -0.34
USP16-206ENST00000485067 GCC2Q8IWJ2 1684 aa12.96□□□□□ -0.34
USP16-206ENST00000485067 NUP160Q12769 1436 aa12.95□□□□□ -0.34
USP16-206ENST00000485067 BRD2P25440 801 aaKnown RBP12.95□□□□□ -0.34
USP16-206ENST00000485067 JPH4Q96JJ6 628 aa12.95□□□□□ -0.34
USP16-206ENST00000485067 CCDC136Q96JN2 1154 aa12.95□□□□□ -0.34
USP16-206ENST00000485067 RAPGEF6Q8TEU7 1601 aa12.95□□□□□ -0.34
USP16-206ENST00000485067 YTHDC1Q96MU7 727 aaKnown RBP12.95□□□□□ -0.34
USP16-206ENST00000485067 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
USP16-206ENST00000485067 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
USP16-206ENST00000485067 RRP7BPQ9NSQ0 103 aa12.93□□□□□ -0.34
USP16-206ENST00000485067 ZNF644Q9H582 1327 aaPredicted RBP12.93□□□□□ -0.34
USP16-206ENST00000485067 PRG4Q92954 1404 aaPredicted RBP12.92□□□□□ -0.34
USP16-206ENST00000485067 PPP1R15AO75807 674 aaPredicted RBP12.91□□□□□ -0.34
USP16-206ENST00000485067 KDM6BO15054 1643 aa12.9□□□□□ -0.34
USP16-206ENST00000485067 DHX37Q8IY37 1157 aaKnown RBP12.89□□□□□ -0.35
USP16-206ENST00000485067 TONSLQ96HA7 1378 aa12.88□□□□□ -0.35
USP16-206ENST00000485067 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
USP16-206ENST00000485067 CHD1O14646 1710 aa12.87□□□□□ -0.35
USP16-206ENST00000485067 KIF14Q15058 1648 aa12.87□□□□□ -0.35
USP16-206ENST00000485067 CDK11AQ9UQ88 783 aaPredicted RBP12.87□□□□□ -0.35
USP16-206ENST00000485067 AAMPQ13685 434 aa12.86□□□□□ -0.35
USP16-206ENST00000485067 CARMIL2Q6F5E8 1435 aa12.85□□□□□ -0.35
USP16-206ENST00000485067 ROCK1Q13464 1354 aa12.85□□□□□ -0.35
USP16-206ENST00000485067 DNMT1P26358 1616 aaKnown RBP12.84□□□□□ -0.35
USP16-206ENST00000485067 ITSN2Q9NZM3 1697 aa12.83□□□□□ -0.36
USP16-206ENST00000485067 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
USP16-206ENST00000485067 DENND4BO75064 1496 aaPredicted RBP12.83□□□□□ -0.36
USP16-206ENST00000485067 ADCY10Q96PN6 1610 aa12.83□□□□□ -0.36
USP16-206ENST00000485067 TMEM132AQ24JP5 1023 aa12.82□□□□□ -0.36
USP16-206ENST00000485067 TROQ12816 1431 aaPredicted RBP12.82□□□□□ -0.36
USP16-206ENST00000485067 HIRIP3Q9BW71 556 aaPredicted RBP12.82□□□□□ -0.36
USP16-206ENST00000485067 ABCA8O94911 1581 aa12.82□□□□□ -0.36
USP16-206ENST00000485067 ERCC6L2Q5T890 1561 aa12.82□□□□□ -0.36
USP16-206ENST00000485067 DAPK1P53355 1430 aa12.81□□□□□ -0.36
USP16-206ENST00000485067 ABCC5O15440 1437 aa12.81□□□□□ -0.36
USP16-206ENST00000485067 A0A0U1RQG5 324 aaPredicted RBP12.81□□□□□ -0.36
USP16-206ENST00000485067 ZNF777Q9ULD5 760 aaPredicted RBP12.81□□□□□ -0.36
USP16-206ENST00000485067 ATP10BO94823 1461 aa12.8□□□□□ -0.36
USP16-206ENST00000485067 TRIM52Q96A61 297 aa12.79□□□□□ -0.36
USP16-206ENST00000485067 GPATCH8Q9UKJ3 1502 aaKnown RBP12.79□□□□□ -0.36
USP16-206ENST00000485067 KDM5BQ9UGL1 1544 aa12.78□□□□□ -0.36
USP16-206ENST00000485067 ADGBQ8N7X0 1667 aa12.77□□□□□ -0.36
USP16-206ENST00000485067 CFDP1Q9UEE9 299 aaPredicted RBP12.77□□□□□ -0.36
USP16-206ENST00000485067 CAMSAP2Q08AD1 1489 aa12.77□□□□□ -0.37
USP16-206ENST00000485067 PTPRGP23470 1445 aa12.77□□□□□ -0.37
USP16-206ENST00000485067 RSPH6AQ9H0K4 717 aa12.77□□□□□ -0.37
USP16-206ENST00000485067 DDX10Q13206 875 aaKnown RBP12.76□□□□□ -0.37
USP16-206ENST00000485067 RSPH4AQ5TD94 716 aa12.76□□□□□ -0.37
USP16-206ENST00000485067 MPHOSPH9Q99550 1183 aa12.75□□□□□ -0.37
USP16-206ENST00000485067 CROCC2H7BZ55 1655 aa12.74□□□□□ -0.37
USP16-206ENST00000485067 GLIPR1L2Q4G1C9 344 aa12.74□□□□□ -0.37
USP16-206ENST00000485067 CDC42BPAQ5VT25 1732 aa12.73□□□□□ -0.37
USP16-206ENST00000485067 PLEKHD1A6NEE1 506 aa12.73□□□□□ -0.37
USP16-206ENST00000485067 ABCC10Q5T3U5 1492 aa12.73□□□□□ -0.37
USP16-206ENST00000485067 CCER2I3L3R5 266 aa12.73□□□□□ -0.37
USP16-206ENST00000485067 ZNF326Q5BKZ1 582 aaKnown RBP12.72□□□□□ -0.37
USP16-206ENST00000485067 SHROOM2Q13796 1616 aa12.72□□□□□ -0.37
USP16-206ENST00000485067 ADGRL2O95490 1459 aa12.72□□□□□ -0.37
USP16-206ENST00000485067 RBM10P98175 930 aaKnown RBP12.72□□□□□ -0.37
USP16-206ENST00000485067 ANP32CO43423 234 aa12.71□□□□□ -0.38
USP16-206ENST00000485067 RPRD2Q5VT52 1461 aaKnown RBP12.7□□□□□ -0.38
USP16-206ENST00000485067 CDK11BP21127 795 aaKnown RBP12.69□□□□□ -0.38
USP16-206ENST00000485067 ANKRD30BQ9BXX2 1392 aa12.69□□□□□ -0.38
USP16-206ENST00000485067 NCOA1Q15788 1441 aa12.68□□□□□ -0.38
USP16-206ENST00000485067 HNRNPMP52272 730 aaKnown RBP eCLIP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms