RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 POGZQ7Z3K3 1410 aa18.77■□□□□ 0.6
SCFD1-206ENST00000484733 ARID4BQ4LE39 1312 aaPredicted RBP18.77■□□□□ 0.6
SCFD1-206ENST00000484733 CLIP1P30622 1438 aa18.77■□□□□ 0.59
SCFD1-206ENST00000484733 CASKIN1Q8WXD9 1431 aa18.77■□□□□ 0.59
SCFD1-206ENST00000484733 MADDQ8WXG6 1647 aa18.76■□□□□ 0.59
SCFD1-206ENST00000484733 CCDC18Q5T9S5 1454 aa18.75■□□□□ 0.59
SCFD1-206ENST00000484733 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
SCFD1-206ENST00000484733 PCF11O94913 1555 aaKnown RBP18.72■□□□□ 0.59
SCFD1-206ENST00000484733 SIGLEC1Q9BZZ2 1709 aa18.7■□□□□ 0.58
SCFD1-206ENST00000484733 ARHGAP5Q13017 1502 aa18.69■□□□□ 0.58
SCFD1-206ENST00000484733 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
SCFD1-206ENST00000484733 ATP10AO60312 1499 aa18.69■□□□□ 0.58
SCFD1-206ENST00000484733 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
SCFD1-206ENST00000484733 ZNF518AQ6AHZ1 1483 aa18.68■□□□□ 0.58
SCFD1-206ENST00000484733 CDC42BPBQ9Y5S2 1711 aa18.68■□□□□ 0.58
SCFD1-206ENST00000484733 KDM5CP41229 1560 aa18.67■□□□□ 0.58
SCFD1-206ENST00000484733 C9orf84Q5VXU9 1444 aa18.66■□□□□ 0.58
SCFD1-206ENST00000484733 PREX2Q70Z35 1606 aa18.66■□□□□ 0.58
SCFD1-206ENST00000484733 ILDR1Q86SU0 546 aaPredicted RBP18.64■□□□□ 0.57
SCFD1-206ENST00000484733 ARHGEF12Q9NZN5 1544 aa18.62■□□□□ 0.57
SCFD1-206ENST00000484733 LMTK3Q96Q04 1460 aa18.62■□□□□ 0.57
SCFD1-206ENST00000484733 FER1L4A9Z1Z3 1794 aa18.61■□□□□ 0.57
SCFD1-206ENST00000484733 MLH3Q9UHC1 1453 aa18.61■□□□□ 0.57
SCFD1-206ENST00000484733 REREQ9P2R6 1566 aa18.61■□□□□ 0.57
SCFD1-206ENST00000484733 AFAP1Q8N556 730 aa18.61■□□□□ 0.57
SCFD1-206ENST00000484733 ABCC1P33527 1531 aa18.61■□□□□ 0.57
SCFD1-206ENST00000484733 CDC42BPAQ5VT25 1732 aa18.6■□□□□ 0.57
SCFD1-206ENST00000484733 ITSN2Q9NZM3 1697 aa18.59■□□□□ 0.57
SCFD1-206ENST00000484733 DIP2CQ9Y2E4 1556 aa18.58■□□□□ 0.56
SCFD1-206ENST00000484733 MLECQ14165 292 aa18.57■□□□□ 0.56
SCFD1-206ENST00000484733 TRAPPC8Q9Y2L5 1435 aa18.56■□□□□ 0.56
SCFD1-206ENST00000484733 ABCA6Q8N139 1617 aa18.54■□□□□ 0.56
SCFD1-206ENST00000484733 AGLP35573 1532 aa18.54■□□□□ 0.56
SCFD1-206ENST00000484733 GPATCH8Q9UKJ3 1502 aaKnown RBP18.54■□□□□ 0.56
SCFD1-206ENST00000484733 MYT1LQ9UL68 1186 aa18.51■□□□□ 0.55
SCFD1-206ENST00000484733 KIDINS220Q9ULH0 1771 aa18.51■□□□□ 0.55
SCFD1-206ENST00000484733 SAMD9LQ8IVG5 1584 aa18.51■□□□□ 0.55
SCFD1-206ENST00000484733 KIAA1107Q9UPP5 1409 aa18.49■□□□□ 0.55
SCFD1-206ENST00000484733 PLEKHH2Q8IVE3 1493 aa18.48■□□□□ 0.55
SCFD1-206ENST00000484733 PREX1Q8TCU6 1659 aa18.47■□□□□ 0.55
SCFD1-206ENST00000484733 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
SCFD1-206ENST00000484733 MTUS2Q5JR59 1369 aa18.46■□□□□ 0.55
SCFD1-206ENST00000484733 CCNB3Q8WWL7 1395 aa18.46■□□□□ 0.55
SCFD1-206ENST00000484733 SYCP2Q9BX26 1530 aa18.46■□□□□ 0.55
SCFD1-206ENST00000484733 CEP162Q5TB80 1403 aa18.45■□□□□ 0.54
SCFD1-206ENST00000484733 HSPA2P54652 639 aa18.45■□□□□ 0.54
SCFD1-206ENST00000484733 ZNF777Q9ULD5 760 aaPredicted RBP18.45■□□□□ 0.54
SCFD1-206ENST00000484733 CFDP1Q9UEE9 299 aaPredicted RBP18.44■□□□□ 0.54
SCFD1-206ENST00000484733 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
SCFD1-206ENST00000484733 FBXO41Q8TF61 875 aa18.44■□□□□ 0.54
SCFD1-206ENST00000484733 CEBPAP49715 358 aaPredicted RBP18.43■□□□□ 0.54
SCFD1-206ENST00000484733 SETD1BQ9UPS6 1966 aaKnown RBP18.43■□□□□ 0.54
SCFD1-206ENST00000484733 HNRNPMP52272 730 aaKnown RBP eCLIP18.43■□□□□ 0.542e-6■■■■□ 19.7
SCFD1-206ENST00000484733 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
SCFD1-206ENST00000484733 CNTLNQ9NXG0 1405 aa18.41■□□□□ 0.54
SCFD1-206ENST00000484733 C3P01024 1663 aa18.41■□□□□ 0.54
SCFD1-206ENST00000484733 TIAM1Q13009 1591 aa18.41■□□□□ 0.54
SCFD1-206ENST00000484733 INO80Q9ULG1 1556 aaPredicted RBP18.41■□□□□ 0.54
SCFD1-206ENST00000484733 ATP7AQ04656 1500 aa18.4■□□□□ 0.54
SCFD1-206ENST00000484733 UHRF1BP1Q6BDS2 1440 aa18.39■□□□□ 0.53
SCFD1-206ENST00000484733 ESF1Q9H501 851 aaKnown RBP18.38■□□□□ 0.53
SCFD1-206ENST00000484733 MROH2AA6NES4 1674 aa18.37■□□□□ 0.53
SCFD1-206ENST00000484733 PLXNC1O60486 1568 aa18.37■□□□□ 0.53
SCFD1-206ENST00000484733 A2MP01023 1474 aa18.35■□□□□ 0.53
SCFD1-206ENST00000484733 MBD5Q9P267 1494 aa18.35■□□□□ 0.53
SCFD1-206ENST00000484733 SUPT6HQ7KZ85 1726 aaKnown RBP18.34■□□□□ 0.53
SCFD1-206ENST00000484733 RTEL1-TNFRSF6BF6WH68 1400 aa18.34■□□□□ 0.53
SCFD1-206ENST00000484733 ADGBQ8N7X0 1667 aa18.33■□□□□ 0.52
SCFD1-206ENST00000484733 STRCQ7RTU9 1775 aa18.33■□□□□ 0.52
SCFD1-206ENST00000484733 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
SCFD1-206ENST00000484733 NPATQ14207 1427 aa18.32■□□□□ 0.52
SCFD1-206ENST00000484733 ZNF644Q9H582 1327 aaPredicted RBP18.32■□□□□ 0.52
SCFD1-206ENST00000484733 PPP6R1Q9UPN7 881 aa18.31■□□□□ 0.52
SCFD1-206ENST00000484733 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
SCFD1-206ENST00000484733 ZMYM3Q14202 1370 aa18.3■□□□□ 0.52
SCFD1-206ENST00000484733 RSPH4AQ5TD94 716 aa18.29■□□□□ 0.52
SCFD1-206ENST00000484733 VPS8Q8N3P4 1428 aa18.29■□□□□ 0.52
SCFD1-206ENST00000484733 CERKQ8TCT0 537 aa18.28■□□□□ 0.52
SCFD1-206ENST00000484733 PTPRTO14522 1441 aa18.27■□□□□ 0.52
SCFD1-206ENST00000484733 CLTCQ00610 1675 aaKnown RBP18.26■□□□□ 0.51
SCFD1-206ENST00000484733 DHX29Q7Z478 1369 aaKnown RBP18.26■□□□□ 0.51
SCFD1-206ENST00000484733 CCDC141Q6ZP82 1450 aa18.25■□□□□ 0.51
SCFD1-206ENST00000484733 MAP3K1Q13233 1512 aa18.25■□□□□ 0.51
SCFD1-206ENST00000484733 CAMSAP2Q08AD1 1489 aa18.25■□□□□ 0.51
SCFD1-206ENST00000484733 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
SCFD1-206ENST00000484733 LRRC9Q6ZRR7 1453 aa18.24■□□□□ 0.51
SCFD1-206ENST00000484733 ARHGEF5Q12774 1597 aa18.23■□□□□ 0.51
SCFD1-206ENST00000484733 PTPRKQ15262 1439 aa18.22■□□□□ 0.51
SCFD1-206ENST00000484733 NCOA1Q15788 1441 aa18.22■□□□□ 0.51
SCFD1-206ENST00000484733 GGT6Q6P531 493 aa18.22■□□□□ 0.51
SCFD1-206ENST00000484733 FAM135AQ9P2D6 1515 aa18.21■□□□□ 0.51
SCFD1-206ENST00000484733 ZNF142P52746 1687 aaPredicted RBP18.2■□□□□ 0.5
SCFD1-206ENST00000484733 CAMSAP1Q5T5Y3 1602 aa18.18■□□□□ 0.5
SCFD1-206ENST00000484733 MYO3AQ8NEV4 1616 aa18.17■□□□□ 0.5
SCFD1-206ENST00000484733 MAST1Q9Y2H9 1570 aa18.16■□□□□ 0.5
SCFD1-206ENST00000484733 TSPY4P0CV99 314 aa18.15■□□□□ 0.5
SCFD1-206ENST00000484733 TSPY10P0CW01 314 aa18.15■□□□□ 0.5
SCFD1-206ENST00000484733 PLA2R1Q13018 1463 aa18.15■□□□□ 0.5
SCFD1-206ENST00000484733 MIA2Q96PC5 1412 aa18.15■□□□□ 0.5
SCFD1-206ENST00000484733 CEP170BQ9Y4F5 1589 aaPredicted RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms