RNA–Protein interactions for RNA: ENST00000484438.1

EEFSEC-204, Transcript of eukaryotic elongation factor, selenocysteine-tRNA specific, humanhuman

TSL 3

Gene EEFSEC, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEFSEC-204ENST00000484438 ARID4BQ4LE39 1312 aaPredicted RBP26.39■■□□□ 1.81
EEFSEC-204ENST00000484438 TROQ12816 1431 aaPredicted RBP26.37■■□□□ 1.81
EEFSEC-204ENST00000484438 SCAPERQ9BY12 1400 aa26.37■■□□□ 1.81
EEFSEC-204ENST00000484438 POGZQ7Z3K3 1410 aa26.35■■□□□ 1.81
EEFSEC-204ENST00000484438 CDC42BPBQ9Y5S2 1711 aa26.35■■□□□ 1.81
EEFSEC-204ENST00000484438 CDK11AQ9UQ88 783 aaPredicted RBP26.33■■□□□ 1.81
EEFSEC-204ENST00000484438 CASKIN1Q8WXD9 1431 aa26.31■■□□□ 1.8
EEFSEC-204ENST00000484438 ARHGAP5Q13017 1502 aa26.3■■□□□ 1.8
EEFSEC-204ENST00000484438 MAGI2Q86UL8 1455 aa26.3■■□□□ 1.8
EEFSEC-204ENST00000484438 CLIP1P30622 1438 aa26.29■■□□□ 1.8
EEFSEC-204ENST00000484438 PREX2Q70Z35 1606 aa26.28■■□□□ 1.8
EEFSEC-204ENST00000484438 EFCAB2Q5VUJ9 269 aa26.27■■□□□ 1.8
EEFSEC-204ENST00000484438 FER1L4A9Z1Z3 1794 aa26.27■■□□□ 1.8
EEFSEC-204ENST00000484438 CCDC18Q5T9S5 1454 aa26.26■■□□□ 1.79
EEFSEC-204ENST00000484438 CDC42BPAQ5VT25 1732 aa26.25■■□□□ 1.79
EEFSEC-204ENST00000484438 ILDR1Q86SU0 546 aaPredicted RBP26.23■■□□□ 1.79
EEFSEC-204ENST00000484438 KDM5CP41229 1560 aa26.22■■□□□ 1.79
EEFSEC-204ENST00000484438 FYCO1Q9BQS8 1478 aa26.22■■□□□ 1.79
EEFSEC-204ENST00000484438 ITSN2Q9NZM3 1697 aa26.2■■□□□ 1.78
EEFSEC-204ENST00000484438 ATP10AO60312 1499 aa26.19■■□□□ 1.78
EEFSEC-204ENST00000484438 ZNF518AQ6AHZ1 1483 aa26.19■■□□□ 1.78
EEFSEC-204ENST00000484438 MLECQ14165 292 aa26.19■■□□□ 1.78
EEFSEC-204ENST00000484438 LMTK3Q96Q04 1460 aa26.18■■□□□ 1.78
EEFSEC-204ENST00000484438 C9orf84Q5VXU9 1444 aa26.17■■□□□ 1.78
EEFSEC-204ENST00000484438 PLPPR3Q6T4P5 718 aa26.17■■□□□ 1.78
EEFSEC-204ENST00000484438 ABCC1P33527 1531 aa26.17■■□□□ 1.78
EEFSEC-204ENST00000484438 AFAP1Q8N556 730 aa26.16■■□□□ 1.78
EEFSEC-204ENST00000484438 ABCA6Q8N139 1617 aa26.16■■□□□ 1.78
EEFSEC-204ENST00000484438 DIP2CQ9Y2E4 1556 aa26.16■■□□□ 1.78
EEFSEC-204ENST00000484438 ARHGEF12Q9NZN5 1544 aa26.15■■□□□ 1.78
EEFSEC-204ENST00000484438 TRAPPC8Q9Y2L5 1435 aa26.11■■□□□ 1.77
EEFSEC-204ENST00000484438 SAMD9LQ8IVG5 1584 aa26.08■■□□□ 1.77
EEFSEC-204ENST00000484438 KIDINS220Q9ULH0 1771 aa26.08■■□□□ 1.77
EEFSEC-204ENST00000484438 REREQ9P2R6 1566 aa26.06■■□□□ 1.76
EEFSEC-204ENST00000484438 MLH3Q9UHC1 1453 aa26.05■■□□□ 1.76
EEFSEC-204ENST00000484438 MYT1LQ9UL68 1186 aa26.05■■□□□ 1.76
EEFSEC-204ENST00000484438 HSPA2P54652 639 aa26.03■■□□□ 1.76
EEFSEC-204ENST00000484438 GPATCH8Q9UKJ3 1502 aaKnown RBP26.03■■□□□ 1.76
EEFSEC-204ENST00000484438 SYCP2Q9BX26 1530 aa26.01■■□□□ 1.75
EEFSEC-204ENST00000484438 PREX1Q8TCU6 1659 aa26■■□□□ 1.75
EEFSEC-204ENST00000484438 ZNF777Q9ULD5 760 aaPredicted RBP25.98■■□□□ 1.75
EEFSEC-204ENST00000484438 C3P01024 1663 aa25.97■■□□□ 1.75
EEFSEC-204ENST00000484438 CEBPAP49715 358 aaPredicted RBP25.97■■□□□ 1.75
EEFSEC-204ENST00000484438 CEP162Q5TB80 1403 aa25.96■■□□□ 1.75
EEFSEC-204ENST00000484438 AGLP35573 1532 aa25.95■■□□□ 1.74
EEFSEC-204ENST00000484438 TIAM1Q13009 1591 aa25.93■■□□□ 1.74
EEFSEC-204ENST00000484438 SUPT6HQ7KZ85 1726 aaKnown RBP25.92■■□□□ 1.74
EEFSEC-204ENST00000484438 MTUS2Q5JR59 1369 aa25.92■■□□□ 1.74
EEFSEC-204ENST00000484438 HNRNPMP52272 730 aaKnown RBP eCLIP25.91■■□□□ 1.745e-6■■■■□ 20.5
EEFSEC-204ENST00000484438 EHBP1L1Q8N3D4 1523 aa25.9■■□□□ 1.74
EEFSEC-204ENST00000484438 INO80Q9ULG1 1556 aaPredicted RBP25.9■■□□□ 1.74
EEFSEC-204ENST00000484438 CCNB3Q8WWL7 1395 aa25.89■■□□□ 1.74
EEFSEC-204ENST00000484438 ATP7AQ04656 1500 aa25.88■■□□□ 1.73
EEFSEC-204ENST00000484438 SETD1BQ9UPS6 1966 aaKnown RBP25.87■■□□□ 1.73
EEFSEC-204ENST00000484438 CFDP1Q9UEE9 299 aaPredicted RBP25.86■■□□□ 1.73
EEFSEC-204ENST00000484438 STRCQ7RTU9 1775 aa25.85■■□□□ 1.73
EEFSEC-204ENST00000484438 KIAA1107Q9UPP5 1409 aa25.84■■□□□ 1.73
EEFSEC-204ENST00000484438 PLEKHH2Q8IVE3 1493 aa25.84■■□□□ 1.73
EEFSEC-204ENST00000484438 SPAG9O60271 1321 aaKnown RBP25.84■■□□□ 1.73
EEFSEC-204ENST00000484438 PLXNC1O60486 1568 aa25.82■■□□□ 1.72
EEFSEC-204ENST00000484438 ZNF644Q9H582 1327 aaPredicted RBP25.81■■□□□ 1.72
EEFSEC-204ENST00000484438 FBXO41Q8TF61 875 aa25.8■■□□□ 1.72
EEFSEC-204ENST00000484438 MROH2AA6NES4 1674 aa25.8■■□□□ 1.72
EEFSEC-204ENST00000484438 CLTCQ00610 1675 aaKnown RBP25.79■■□□□ 1.72
EEFSEC-204ENST00000484438 UHRF1BP1Q6BDS2 1440 aa25.79■■□□□ 1.72
EEFSEC-204ENST00000484438 ADGBQ8N7X0 1667 aa25.78■■□□□ 1.72
EEFSEC-204ENST00000484438 A2MP01023 1474 aa25.75■■□□□ 1.71
EEFSEC-204ENST00000484438 MBD5Q9P267 1494 aa25.75■■□□□ 1.71
EEFSEC-204ENST00000484438 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
EEFSEC-204ENST00000484438 ESF1Q9H501 851 aaKnown RBP25.75■■□□□ 1.71
EEFSEC-204ENST00000484438 NCOA2Q15596 1464 aa25.74■■□□□ 1.71
EEFSEC-204ENST00000484438 CNTLNQ9NXG0 1405 aa25.73■■□□□ 1.71
EEFSEC-204ENST00000484438 CAMSAP2Q08AD1 1489 aa25.68■■□□□ 1.7
EEFSEC-204ENST00000484438 VPS8Q8N3P4 1428 aa25.66■■□□□ 1.7
EEFSEC-204ENST00000484438 ZMYM3Q14202 1370 aa25.65■■□□□ 1.7
EEFSEC-204ENST00000484438 MYO3AQ8NEV4 1616 aa25.63■■□□□ 1.69
EEFSEC-204ENST00000484438 CCDC141Q6ZP82 1450 aa25.62■■□□□ 1.69
EEFSEC-204ENST00000484438 GGT6Q6P531 493 aa25.62■■□□□ 1.69
EEFSEC-204ENST00000484438 CERKQ8TCT0 537 aa25.62■■□□□ 1.69
EEFSEC-204ENST00000484438 RTEL1-TNFRSF6BF6WH68 1400 aa25.62■■□□□ 1.69
EEFSEC-204ENST00000484438 NPATQ14207 1427 aa25.62■■□□□ 1.69
EEFSEC-204ENST00000484438 LRRC9Q6ZRR7 1453 aa25.61■■□□□ 1.69
EEFSEC-204ENST00000484438 ZNF142P52746 1687 aaPredicted RBP25.6■■□□□ 1.69
EEFSEC-204ENST00000484438 CAMSAP1Q5T5Y3 1602 aa25.59■■□□□ 1.69
EEFSEC-204ENST00000484438 ARHGEF5Q12774 1597 aa25.58■■□□□ 1.69
EEFSEC-204ENST00000484438 PTPRKQ15262 1439 aa25.57■■□□□ 1.68
EEFSEC-204ENST00000484438 NCOA1Q15788 1441 aa25.57■■□□□ 1.68
EEFSEC-204ENST00000484438 DHX29Q7Z478 1369 aaKnown RBP25.56■■□□□ 1.68
EEFSEC-204ENST00000484438 DMRT2Q9Y5R5 561 aa25.55■■□□□ 1.68
EEFSEC-204ENST00000484438 PTPRTO14522 1441 aa25.54■■□□□ 1.68
EEFSEC-204ENST00000484438 CEP170BQ9Y4F5 1589 aaPredicted RBP25.53■■□□□ 1.68
EEFSEC-204ENST00000484438 KANK4Q5T7N3 995 aaPredicted RBP25.53■■□□□ 1.68
EEFSEC-204ENST00000484438 MAP3K1Q13233 1512 aa25.51■■□□□ 1.67
EEFSEC-204ENST00000484438 LTBP4Q8N2S1 1624 aa25.48■■□□□ 1.67
EEFSEC-204ENST00000484438 KIF3BO15066 747 aa25.48■■□□□ 1.67
EEFSEC-204ENST00000484438 MAST1Q9Y2H9 1570 aa25.47■■□□□ 1.67
EEFSEC-204ENST00000484438 PPP6R1Q9UPN7 881 aa25.46■■□□□ 1.67
EEFSEC-204ENST00000484438 KDM5DQ9BY66 1539 aa25.46■■□□□ 1.67
EEFSEC-204ENST00000484438 RSPH4AQ5TD94 716 aa25.45■■□□□ 1.66
EEFSEC-204ENST00000484438 NCKAP5LQ9HCH0 1330 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms