RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 MAGI2Q86UL8 1455 aa15.36■□□□□ 0.05
HMG20B-210ENST00000483417 MYO5CQ9NQX4 1742 aa15.36■□□□□ 0.05
HMG20B-210ENST00000483417 POGZQ7Z3K3 1410 aa15.35■□□□□ 0.05
HMG20B-210ENST00000483417 YEATS2Q9ULM3 1422 aa15.35■□□□□ 0.05
HMG20B-210ENST00000483417 ARHGEF40Q8TER5 1519 aa15.34■□□□□ 0.05
HMG20B-210ENST00000483417 BCORL1Q5H9F3 1711 aa15.32■□□□□ 0.04
HMG20B-210ENST00000483417 AFAP1Q8N556 730 aa15.32■□□□□ 0.04
HMG20B-210ENST00000483417 ARID4BQ4LE39 1312 aaPredicted RBP15.32■□□□□ 0.04
HMG20B-210ENST00000483417 CDC42BPBQ9Y5S2 1711 aa15.31■□□□□ 0.04
HMG20B-210ENST00000483417 PTPRMP28827 1452 aa15.31■□□□□ 0.04
HMG20B-210ENST00000483417 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
HMG20B-210ENST00000483417 ZFYVE16Q7Z3T8 1539 aa15.31■□□□□ 0.04
HMG20B-210ENST00000483417 SIGLEC1Q9BZZ2 1709 aa15.3■□□□□ 0.04
HMG20B-210ENST00000483417 ARHGEF12Q9NZN5 1544 aa15.28■□□□□ 0.04
HMG20B-210ENST00000483417 ATP10AO60312 1499 aa15.28■□□□□ 0.04
HMG20B-210ENST00000483417 HECW2Q9P2P5 1572 aa15.28■□□□□ 0.04
HMG20B-210ENST00000483417 ZNF518AQ6AHZ1 1483 aa15.27■□□□□ 0.04
HMG20B-210ENST00000483417 PREX2Q70Z35 1606 aa15.27■□□□□ 0.03
HMG20B-210ENST00000483417 KDM5CP41229 1560 aa15.27■□□□□ 0.03
HMG20B-210ENST00000483417 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.03
HMG20B-210ENST00000483417 MADDQ8WXG6 1647 aa15.26■□□□□ 0.03
HMG20B-210ENST00000483417 CDC42BPAQ5VT25 1732 aa15.26■□□□□ 0.03
HMG20B-210ENST00000483417 TRAPPC8Q9Y2L5 1435 aa15.26■□□□□ 0.03
HMG20B-210ENST00000483417 ABCC1P33527 1531 aa15.24■□□□□ 0.03
HMG20B-210ENST00000483417 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
HMG20B-210ENST00000483417 C9orf84Q5VXU9 1444 aa15.23■□□□□ 0.03
HMG20B-210ENST00000483417 MTUS2Q5JR59 1369 aa15.21■□□□□ 0.02
HMG20B-210ENST00000483417 MLECQ14165 292 aa15.2■□□□□ 0.02
HMG20B-210ENST00000483417 SAMD9LQ8IVG5 1584 aa15.19■□□□□ 0.02
HMG20B-210ENST00000483417 HNRNPMP52272 730 aaKnown RBP eCLIP15.19■□□□□ 0.02
HMG20B-210ENST00000483417 CFDP1Q9UEE9 299 aaPredicted RBP15.19■□□□□ 0.02
HMG20B-210ENST00000483417 ZNF777Q9ULD5 760 aaPredicted RBP15.19■□□□□ 0.02
HMG20B-210ENST00000483417 DIP2CQ9Y2E4 1556 aa15.19■□□□□ 0.02
HMG20B-210ENST00000483417 RIMS1Q86UR5 1692 aaKnown RBP15.19■□□□□ 0.02
HMG20B-210ENST00000483417 ITSN2Q9NZM3 1697 aa15.19■□□□□ 0.02
HMG20B-210ENST00000483417 KIAA1107Q9UPP5 1409 aa15.18■□□□□ 0.02
HMG20B-210ENST00000483417 CCNB3Q8WWL7 1395 aa15.18■□□□□ 0.02
HMG20B-210ENST00000483417 REREQ9P2R6 1566 aa15.18■□□□□ 0.02
HMG20B-210ENST00000483417 MYT1LQ9UL68 1186 aa15.16■□□□□ 0.02
HMG20B-210ENST00000483417 ABCA6Q8N139 1617 aa15.16■□□□□ 0.02
HMG20B-210ENST00000483417 KIDINS220Q9ULH0 1771 aa15.16■□□□□ 0.02
HMG20B-210ENST00000483417 ZNF644Q9H582 1327 aaPredicted RBP15.15■□□□□ 0.02
HMG20B-210ENST00000483417 LMTK3Q96Q04 1460 aa15.14■□□□□ 0.01
HMG20B-210ENST00000483417 AGLP35573 1532 aa15.14■□□□□ 0.01
HMG20B-210ENST00000483417 EHBP1L1Q8N3D4 1523 aa15.14■□□□□ 0.01
HMG20B-210ENST00000483417 VPS8Q8N3P4 1428 aa15.14■□□□□ 0.01
HMG20B-210ENST00000483417 PLEKHH2Q8IVE3 1493 aa15.14■□□□□ 0.01
HMG20B-210ENST00000483417 SYCP2Q9BX26 1530 aa15.13■□□□□ 0.01
HMG20B-210ENST00000483417 TIAM1Q13009 1591 aa15.13■□□□□ 0.01
HMG20B-210ENST00000483417 SPAG9O60271 1321 aaKnown RBP15.13■□□□□ 0.01
HMG20B-210ENST00000483417 CEBPAP49715 358 aaPredicted RBP15.12■□□□□ 0.01
HMG20B-210ENST00000483417 KANK4Q5T7N3 995 aaPredicted RBP15.12■□□□□ 0.01
HMG20B-210ENST00000483417 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
HMG20B-210ENST00000483417 FER1L4A9Z1Z3 1794 aa15.11■□□□□ 0.01
HMG20B-210ENST00000483417 NCOA2Q15596 1464 aa15.1■□□□□ 0.01
HMG20B-210ENST00000483417 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
HMG20B-210ENST00000483417 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
HMG20B-210ENST00000483417 HSPA2P54652 639 aa15.07■□□□□ 0
HMG20B-210ENST00000483417 LRRC9Q6ZRR7 1453 aa15.07■□□□□ 0
HMG20B-210ENST00000483417 ATP7AQ04656 1500 aa15.07■□□□□ 0
HMG20B-210ENST00000483417 MAP3K1Q13233 1512 aa15.07■□□□□ 0
HMG20B-210ENST00000483417 INO80Q9ULG1 1556 aaPredicted RBP15.07■□□□□ 0
HMG20B-210ENST00000483417 ILDR1Q86SU0 546 aaPredicted RBP15.05■□□□□ -0
HMG20B-210ENST00000483417 SUPT6HQ7KZ85 1726 aaKnown RBP15.05■□□□□ -0
HMG20B-210ENST00000483417 A2MP01023 1474 aa15.04■□□□□ -0
HMG20B-210ENST00000483417 RTEL1-TNFRSF6BF6WH68 1400 aa15.04■□□□□ -0
HMG20B-210ENST00000483417 RSPH4AQ5TD94 716 aa15.04■□□□□ -0
HMG20B-210ENST00000483417 PLXNC1O60486 1568 aa15.03■□□□□ -0
HMG20B-210ENST00000483417 CNTLNQ9NXG0 1405 aa15.01□□□□□ -0.01
HMG20B-210ENST00000483417 C3P01024 1663 aa15.01□□□□□ -0.01
HMG20B-210ENST00000483417 APLP2Q06481 763 aa15.01□□□□□ -0.01
HMG20B-210ENST00000483417 CAMSAP2Q08AD1 1489 aa15□□□□□ -0.01
HMG20B-210ENST00000483417 ZMYM3Q14202 1370 aa14.99□□□□□ -0.01
HMG20B-210ENST00000483417 DHX29Q7Z478 1369 aaKnown RBP14.99□□□□□ -0.01
HMG20B-210ENST00000483417 SETD1BQ9UPS6 1966 aaKnown RBP14.99□□□□□ -0.01
HMG20B-210ENST00000483417 ESF1Q9H501 851 aaKnown RBP14.99□□□□□ -0.01
HMG20B-210ENST00000483417 PREX1Q8TCU6 1659 aa14.99□□□□□ -0.01
HMG20B-210ENST00000483417 CCDC141Q6ZP82 1450 aa14.98□□□□□ -0.01
HMG20B-210ENST00000483417 PPP6R1Q9UPN7 881 aa14.98□□□□□ -0.01
HMG20B-210ENST00000483417 ADGBQ8N7X0 1667 aa14.97□□□□□ -0.01
HMG20B-210ENST00000483417 GGT6Q6P531 493 aa14.97□□□□□ -0.01
HMG20B-210ENST00000483417 ARHGEF5Q12774 1597 aa14.96□□□□□ -0.01
HMG20B-210ENST00000483417 UHRF1BP1Q6BDS2 1440 aa14.95□□□□□ -0.02
HMG20B-210ENST00000483417 MIA2Q96PC5 1412 aa14.95□□□□□ -0.02
HMG20B-210ENST00000483417 MROH2AA6NES4 1674 aa14.95□□□□□ -0.02
HMG20B-210ENST00000483417 NPATQ14207 1427 aa14.94□□□□□ -0.02
HMG20B-210ENST00000483417 MYOM3Q5VTT5 1437 aa14.94□□□□□ -0.02
HMG20B-210ENST00000483417 TSPY4P0CV99 314 aa14.94□□□□□ -0.02
HMG20B-210ENST00000483417 TSPY10P0CW01 314 aa14.94□□□□□ -0.02
HMG20B-210ENST00000483417 KIF3BO15066 747 aa14.92□□□□□ -0.02
HMG20B-210ENST00000483417 STRCQ7RTU9 1775 aa14.92□□□□□ -0.02
HMG20B-210ENST00000483417 PTPRKQ15262 1439 aa14.92□□□□□ -0.02
HMG20B-210ENST00000483417 CLTCQ00610 1675 aaKnown RBP14.91□□□□□ -0.02
HMG20B-210ENST00000483417 MAST1Q9Y2H9 1570 aa14.9□□□□□ -0.02
HMG20B-210ENST00000483417 FBXO41Q8TF61 875 aa14.89□□□□□ -0.03
HMG20B-210ENST00000483417 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
HMG20B-210ENST00000483417 ABCC5O15440 1437 aa14.85□□□□□ -0.03
HMG20B-210ENST00000483417 FBXO31Q5XUX0 539 aaPredicted RBP14.85□□□□□ -0.03
HMG20B-210ENST00000483417 PTPRTO14522 1441 aa14.84□□□□□ -0.03
HMG20B-210ENST00000483417 NCOA1Q15788 1441 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms