RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 MADDQ8WXG6 1647 aa31.89■■■□□ 2.7
R3HDM1-215ENST00000483021 PCF11O94913 1555 aaKnown RBP31.87■■■□□ 2.69
R3HDM1-215ENST00000483021 POGZQ7Z3K3 1410 aa31.87■■■□□ 2.69
R3HDM1-215ENST00000483021 CCDC18Q5T9S5 1454 aa31.85■■■□□ 2.69
R3HDM1-215ENST00000483021 SCAPERQ9BY12 1400 aa31.85■■■□□ 2.69
R3HDM1-215ENST00000483021 CASKIN1Q8WXD9 1431 aa31.84■■■□□ 2.69
R3HDM1-215ENST00000483021 EFCAB2Q5VUJ9 269 aa31.82■■■□□ 2.68
R3HDM1-215ENST00000483021 YEATS2Q9ULM3 1422 aa31.81■■■□□ 2.68
R3HDM1-215ENST00000483021 ARHGAP5Q13017 1502 aa31.8■■■□□ 2.68
R3HDM1-215ENST00000483021 RIMS1Q86UR5 1692 aaKnown RBP31.79■■■□□ 2.68
R3HDM1-215ENST00000483021 FYCO1Q9BQS8 1478 aa31.77■■■□□ 2.68
R3HDM1-215ENST00000483021 SIGLEC1Q9BZZ2 1709 aa31.76■■■□□ 2.67
R3HDM1-215ENST00000483021 ZNF518AQ6AHZ1 1483 aa31.74■■■□□ 2.67
R3HDM1-215ENST00000483021 CDC42BPBQ9Y5S2 1711 aa31.74■■■□□ 2.67
R3HDM1-215ENST00000483021 PREX2Q70Z35 1606 aa31.73■■■□□ 2.67
R3HDM1-215ENST00000483021 KDM5CP41229 1560 aa31.7■■■□□ 2.67
R3HDM1-215ENST00000483021 ATP10AO60312 1499 aa31.68■■■□□ 2.66
R3HDM1-215ENST00000483021 FER1L4A9Z1Z3 1794 aa31.68■■■□□ 2.66
R3HDM1-215ENST00000483021 C9orf84Q5VXU9 1444 aa31.67■■■□□ 2.66
R3HDM1-215ENST00000483021 CDC42BPAQ5VT25 1732 aa31.63■■■□□ 2.65
R3HDM1-215ENST00000483021 ABCC1P33527 1531 aa31.62■■■□□ 2.65
R3HDM1-215ENST00000483021 ITSN2Q9NZM3 1697 aa31.6■■■□□ 2.65
R3HDM1-215ENST00000483021 LMTK3Q96Q04 1460 aa31.6■■■□□ 2.65
R3HDM1-215ENST00000483021 ARHGEF12Q9NZN5 1544 aa31.59■■■□□ 2.65
R3HDM1-215ENST00000483021 DIP2CQ9Y2E4 1556 aa31.56■■■□□ 2.64
R3HDM1-215ENST00000483021 AFAP1Q8N556 730 aa31.56■■■□□ 2.64
R3HDM1-215ENST00000483021 REREQ9P2R6 1566 aa31.56■■■□□ 2.64
R3HDM1-215ENST00000483021 MLH3Q9UHC1 1453 aa31.55■■■□□ 2.64
R3HDM1-215ENST00000483021 MLECQ14165 292 aa31.55■■■□□ 2.64
R3HDM1-215ENST00000483021 ILDR1Q86SU0 546 aaPredicted RBP31.55■■■□□ 2.64
R3HDM1-215ENST00000483021 ABCA6Q8N139 1617 aa31.53■■■□□ 2.64
R3HDM1-215ENST00000483021 MYT1LQ9UL68 1186 aa31.5■■■□□ 2.63
R3HDM1-215ENST00000483021 TRAPPC8Q9Y2L5 1435 aa31.49■■■□□ 2.63
R3HDM1-215ENST00000483021 PLPPR3Q6T4P5 718 aa31.45■■■□□ 2.63
R3HDM1-215ENST00000483021 SAMD9LQ8IVG5 1584 aa31.45■■■□□ 2.63
R3HDM1-215ENST00000483021 GPATCH8Q9UKJ3 1502 aaKnown RBP31.44■■■□□ 2.62
R3HDM1-215ENST00000483021 KIDINS220Q9ULH0 1771 aa31.44■■■□□ 2.62
R3HDM1-215ENST00000483021 AGLP35573 1532 aa31.42■■■□□ 2.62
R3HDM1-215ENST00000483021 PREX1Q8TCU6 1659 aa31.41■■■□□ 2.62
R3HDM1-215ENST00000483021 SYCP2Q9BX26 1530 aa31.4■■■□□ 2.62
R3HDM1-215ENST00000483021 MTUS2Q5JR59 1369 aa31.39■■■□□ 2.62
R3HDM1-215ENST00000483021 CEP162Q5TB80 1403 aa31.38■■■□□ 2.61
R3HDM1-215ENST00000483021 PLEKHH2Q8IVE3 1493 aa31.37■■■□□ 2.61
R3HDM1-215ENST00000483021 EHBP1L1Q8N3D4 1523 aa31.36■■■□□ 2.61
R3HDM1-215ENST00000483021 ZNF777Q9ULD5 760 aaPredicted RBP31.36■■■□□ 2.61
R3HDM1-215ENST00000483021 CCNB3Q8WWL7 1395 aa31.35■■■□□ 2.61
R3HDM1-215ENST00000483021 KIAA1107Q9UPP5 1409 aa31.33■■■□□ 2.61
R3HDM1-215ENST00000483021 HSPA2P54652 639 aa31.32■■■□□ 2.6
R3HDM1-215ENST00000483021 CFDP1Q9UEE9 299 aaPredicted RBP31.31■■■□□ 2.6
R3HDM1-215ENST00000483021 SETD1BQ9UPS6 1966 aaKnown RBP31.3■■■□□ 2.6
R3HDM1-215ENST00000483021 C3P01024 1663 aa31.29■■■□□ 2.6
R3HDM1-215ENST00000483021 TIAM1Q13009 1591 aa31.29■■■□□ 2.6
R3HDM1-215ENST00000483021 INO80Q9ULG1 1556 aaPredicted RBP31.28■■■□□ 2.6
R3HDM1-215ENST00000483021 ATP7AQ04656 1500 aa31.28■■■□□ 2.6
R3HDM1-215ENST00000483021 SPAG9O60271 1321 aaKnown RBP31.26■■■□□ 2.6
R3HDM1-215ENST00000483021 CEBPAP49715 358 aaPredicted RBP31.25■■■□□ 2.59
R3HDM1-215ENST00000483021 ESF1Q9H501 851 aaKnown RBP31.25■■■□□ 2.59
R3HDM1-215ENST00000483021 HNRNPMP52272 730 aaKnown RBP eCLIP31.24■■■□□ 2.59
R3HDM1-215ENST00000483021 CNTLNQ9NXG0 1405 aa31.24■■■□□ 2.59
R3HDM1-215ENST00000483021 UHRF1BP1Q6BDS2 1440 aa31.22■■■□□ 2.59
R3HDM1-215ENST00000483021 FBXO41Q8TF61 875 aa31.21■■■□□ 2.59
R3HDM1-215ENST00000483021 SUPT6HQ7KZ85 1726 aaKnown RBP31.21■■■□□ 2.59
R3HDM1-215ENST00000483021 MROH2AA6NES4 1674 aa31.2■■■□□ 2.59
R3HDM1-215ENST00000483021 PLXNC1O60486 1568 aa31.2■■■□□ 2.58
R3HDM1-215ENST00000483021 ADGBQ8N7X0 1667 aa31.16■■■□□ 2.58
R3HDM1-215ENST00000483021 A2MP01023 1474 aa31.14■■■□□ 2.58
R3HDM1-215ENST00000483021 NCOA2Q15596 1464 aa31.1■■■□□ 2.57
R3HDM1-215ENST00000483021 MBD5Q9P267 1494 aa31.1■■■□□ 2.57
R3HDM1-215ENST00000483021 STRCQ7RTU9 1775 aa31.1■■■□□ 2.57
R3HDM1-215ENST00000483021 VPS8Q8N3P4 1428 aa31.07■■■□□ 2.57
R3HDM1-215ENST00000483021 ZNF644Q9H582 1327 aaPredicted RBP31.07■■■□□ 2.56
R3HDM1-215ENST00000483021 CLTCQ00610 1675 aaKnown RBP31.06■■■□□ 2.56
R3HDM1-215ENST00000483021 RTEL1-TNFRSF6BF6WH68 1400 aa31.06■■■□□ 2.56
R3HDM1-215ENST00000483021 NPATQ14207 1427 aa31.06■■■□□ 2.56
R3HDM1-215ENST00000483021 CAMSAP2Q08AD1 1489 aa31.03■■■□□ 2.56
R3HDM1-215ENST00000483021 DMRT2Q9Y5R5 561 aa31.03■■■□□ 2.56
R3HDM1-215ENST00000483021 CCDC141Q6ZP82 1450 aa31.02■■■□□ 2.56
R3HDM1-215ENST00000483021 ZMYM3Q14202 1370 aa31.01■■■□□ 2.55
R3HDM1-215ENST00000483021 LRRC9Q6ZRR7 1453 aa30.98■■■□□ 2.55
R3HDM1-215ENST00000483021 LOC105371045A0A1W2PR82 267 aa30.97■■■□□ 2.55
R3HDM1-215ENST00000483021 PPP6R1Q9UPN7 881 aa30.96■■■□□ 2.55
R3HDM1-215ENST00000483021 ARHGEF5Q12774 1597 aa30.96■■■□□ 2.55
R3HDM1-215ENST00000483021 MAP3K1Q13233 1512 aa30.95■■■□□ 2.55
R3HDM1-215ENST00000483021 RSPH4AQ5TD94 716 aa30.95■■■□□ 2.55
R3HDM1-215ENST00000483021 GGT6Q6P531 493 aa30.94■■■□□ 2.54
R3HDM1-215ENST00000483021 CERKQ8TCT0 537 aa30.94■■■□□ 2.54
R3HDM1-215ENST00000483021 MYO3AQ8NEV4 1616 aa30.93■■■□□ 2.54
R3HDM1-215ENST00000483021 ZNF142P52746 1687 aaPredicted RBP30.93■■■□□ 2.54
R3HDM1-215ENST00000483021 DHX29Q7Z478 1369 aaKnown RBP30.92■■■□□ 2.54
R3HDM1-215ENST00000483021 PTPRTO14522 1441 aa30.92■■■□□ 2.54
R3HDM1-215ENST00000483021 NCOA1Q15788 1441 aa30.9■■■□□ 2.54
R3HDM1-215ENST00000483021 PTPRKQ15262 1439 aa30.89■■■□□ 2.53
R3HDM1-215ENST00000483021 FAM135AQ9P2D6 1515 aa30.88■■■□□ 2.53
R3HDM1-215ENST00000483021 CAMSAP1Q5T5Y3 1602 aa30.87■■■□□ 2.53
R3HDM1-215ENST00000483021 CEP170BQ9Y4F5 1589 aaPredicted RBP30.85■■■□□ 2.53
R3HDM1-215ENST00000483021 KDM5DQ9BY66 1539 aa30.82■■■□□ 2.52
R3HDM1-215ENST00000483021 MAST1Q9Y2H9 1570 aa30.81■■■□□ 2.52
R3HDM1-215ENST00000483021 TSPY4P0CV99 314 aa30.8■■■□□ 2.52
R3HDM1-215ENST00000483021 TSPY10P0CW01 314 aa30.8■■■□□ 2.52
R3HDM1-215ENST00000483021 PLA2R1Q13018 1463 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms