RNA–Protein interactions for RNA: ENST00000482863.1

PCOLCE-206, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-206ENST00000482863 ZMYM4Q5VZL5 1548 aa25.68■■□□□ 1.7
PCOLCE-206ENST00000482863 ZFYVE16Q7Z3T8 1539 aa25.68■■□□□ 1.7
PCOLCE-206ENST00000482863 MLECQ14165 292 aa25.68■■□□□ 1.7
PCOLCE-206ENST00000482863 EFCAB2Q5VUJ9 269 aa25.68■■□□□ 1.7
PCOLCE-206ENST00000482863 TROQ12816 1431 aaPredicted RBP25.68■■□□□ 1.7
PCOLCE-206ENST00000482863 POGZQ7Z3K3 1410 aa25.67■■□□□ 1.7
PCOLCE-206ENST00000482863 RIMS1Q86UR5 1692 aaKnown RBP25.64■■□□□ 1.69
PCOLCE-206ENST00000482863 MYO5CQ9NQX4 1742 aa25.63■■□□□ 1.69
PCOLCE-206ENST00000482863 PCF11O94913 1555 aaKnown RBP25.62■■□□□ 1.69
PCOLCE-206ENST00000482863 AFAP1Q8N556 730 aa25.61■■□□□ 1.69
PCOLCE-206ENST00000482863 MAGI2Q86UL8 1455 aa25.6■■□□□ 1.69
PCOLCE-206ENST00000482863 ARHGAP5Q13017 1502 aa25.59■■□□□ 1.69
PCOLCE-206ENST00000482863 CLIP1P30622 1438 aa25.59■■□□□ 1.69
PCOLCE-206ENST00000482863 CASKIN1Q8WXD9 1431 aa25.59■■□□□ 1.69
PCOLCE-206ENST00000482863 LMTK3Q96Q04 1460 aa25.55■■□□□ 1.68
PCOLCE-206ENST00000482863 ATP10AO60312 1499 aa25.54■■□□□ 1.68
PCOLCE-206ENST00000482863 HSPA2P54652 639 aa25.54■■□□□ 1.68
PCOLCE-206ENST00000482863 MYT1LQ9UL68 1186 aa25.52■■□□□ 1.68
PCOLCE-206ENST00000482863 CDC42BPBQ9Y5S2 1711 aa25.51■■□□□ 1.67
PCOLCE-206ENST00000482863 CCDC18Q5T9S5 1454 aa25.5■■□□□ 1.67
PCOLCE-206ENST00000482863 C9orf84Q5VXU9 1444 aa25.5■■□□□ 1.67
PCOLCE-206ENST00000482863 ARHGEF12Q9NZN5 1544 aa25.5■■□□□ 1.67
PCOLCE-206ENST00000482863 ZNF518AQ6AHZ1 1483 aa25.49■■□□□ 1.67
PCOLCE-206ENST00000482863 TRAPPC8Q9Y2L5 1435 aa25.48■■□□□ 1.67
PCOLCE-206ENST00000482863 CEBPAP49715 358 aaPredicted RBP25.48■■□□□ 1.67
PCOLCE-206ENST00000482863 KDM5CP41229 1560 aa25.46■■□□□ 1.67
PCOLCE-206ENST00000482863 FYCO1Q9BQS8 1478 aa25.45■■□□□ 1.66
PCOLCE-206ENST00000482863 PREX2Q70Z35 1606 aa25.44■■□□□ 1.66
PCOLCE-206ENST00000482863 FER1L4A9Z1Z3 1794 aa25.44■■□□□ 1.66
PCOLCE-206ENST00000482863 ZNF777Q9ULD5 760 aaPredicted RBP25.43■■□□□ 1.66
PCOLCE-206ENST00000482863 DIP2CQ9Y2E4 1556 aa25.42■■□□□ 1.66
PCOLCE-206ENST00000482863 ABCC1P33527 1531 aa25.41■■□□□ 1.66
PCOLCE-206ENST00000482863 ABCA6Q8N139 1617 aa25.39■■□□□ 1.66
PCOLCE-206ENST00000482863 CDC42BPAQ5VT25 1732 aa25.38■■□□□ 1.65
PCOLCE-206ENST00000482863 MLH3Q9UHC1 1453 aa25.37■■□□□ 1.65
PCOLCE-206ENST00000482863 HNRNPMP52272 730 aaKnown RBP eCLIP25.36■■□□□ 1.65
PCOLCE-206ENST00000482863 ITSN2Q9NZM3 1697 aa25.36■■□□□ 1.65
PCOLCE-206ENST00000482863 GPATCH8Q9UKJ3 1502 aaKnown RBP25.35■■□□□ 1.65
PCOLCE-206ENST00000482863 SAMD9LQ8IVG5 1584 aa25.32■■□□□ 1.64
PCOLCE-206ENST00000482863 FBXO41Q8TF61 875 aa25.32■■□□□ 1.64
PCOLCE-206ENST00000482863 KIDINS220Q9ULH0 1771 aa25.3■■□□□ 1.64
PCOLCE-206ENST00000482863 SYCP2Q9BX26 1530 aa25.29■■□□□ 1.64
PCOLCE-206ENST00000482863 REREQ9P2R6 1566 aa25.28■■□□□ 1.64
PCOLCE-206ENST00000482863 CFDP1Q9UEE9 299 aaPredicted RBP25.27■■□□□ 1.64
PCOLCE-206ENST00000482863 MTUS2Q5JR59 1369 aa25.27■■□□□ 1.64
PCOLCE-206ENST00000482863 ZNF644Q9H582 1327 aaPredicted RBP25.25■■□□□ 1.63
PCOLCE-206ENST00000482863 CCNB3Q8WWL7 1395 aa25.25■■□□□ 1.63
PCOLCE-206ENST00000482863 SPAG9O60271 1321 aaKnown RBP25.24■■□□□ 1.63
PCOLCE-206ENST00000482863 AGLP35573 1532 aa25.23■■□□□ 1.63
PCOLCE-206ENST00000482863 CEP162Q5TB80 1403 aa25.23■■□□□ 1.63
PCOLCE-206ENST00000482863 PREX1Q8TCU6 1659 aa25.2■■□□□ 1.63
PCOLCE-206ENST00000482863 ESF1Q9H501 851 aaKnown RBP25.2■■□□□ 1.62
PCOLCE-206ENST00000482863 LOC105371045A0A1W2PR82 267 aa25.19■■□□□ 1.62
PCOLCE-206ENST00000482863 C3P01024 1663 aa25.18■■□□□ 1.62
PCOLCE-206ENST00000482863 UHRF1BP1Q6BDS2 1440 aa25.17■■□□□ 1.62
PCOLCE-206ENST00000482863 KIAA1107Q9UPP5 1409 aa25.16■■□□□ 1.62
PCOLCE-206ENST00000482863 TIAM1Q13009 1591 aa25.15■■□□□ 1.62
PCOLCE-206ENST00000482863 ATP7AQ04656 1500 aa25.14■■□□□ 1.62
PCOLCE-206ENST00000482863 SUPT6HQ7KZ85 1726 aaKnown RBP25.13■■□□□ 1.61
PCOLCE-206ENST00000482863 CERKQ8TCT0 537 aa25.13■■□□□ 1.61
PCOLCE-206ENST00000482863 PLEKHH2Q8IVE3 1493 aa25.12■■□□□ 1.61
PCOLCE-206ENST00000482863 EHBP1L1Q8N3D4 1523 aa25.12■■□□□ 1.61
PCOLCE-206ENST00000482863 STRCQ7RTU9 1775 aa25.11■■□□□ 1.61
PCOLCE-206ENST00000482863 INO80Q9ULG1 1556 aaPredicted RBP25.1■■□□□ 1.61
PCOLCE-206ENST00000482863 A2MP01023 1474 aa25.09■■□□□ 1.61
PCOLCE-206ENST00000482863 GGT6Q6P531 493 aa25.09■■□□□ 1.61
PCOLCE-206ENST00000482863 MBD5Q9P267 1494 aa25.09■■□□□ 1.61
PCOLCE-206ENST00000482863 ZMYM3Q14202 1370 aa25.07■■□□□ 1.6
PCOLCE-206ENST00000482863 CNTLNQ9NXG0 1405 aa25.07■■□□□ 1.6
PCOLCE-206ENST00000482863 PLXNC1O60486 1568 aa25.05■■□□□ 1.6
PCOLCE-206ENST00000482863 SETD1BQ9UPS6 1966 aaKnown RBP25.04■■□□□ 1.6
PCOLCE-206ENST00000482863 NCOA2Q15596 1464 aa25.03■■□□□ 1.6
PCOLCE-206ENST00000482863 CLTCQ00610 1675 aaKnown RBP25.01■■□□□ 1.59
PCOLCE-206ENST00000482863 DMRT2Q9Y5R5 561 aa25■■□□□ 1.59
PCOLCE-206ENST00000482863 MROH2AA6NES4 1674 aa24.97■■□□□ 1.59
PCOLCE-206ENST00000482863 CAMSAP2Q08AD1 1489 aa24.96■■□□□ 1.59
PCOLCE-206ENST00000482863 NPATQ14207 1427 aa24.96■■□□□ 1.59
PCOLCE-206ENST00000482863 NCKAP5LQ9HCH0 1330 aa24.95■■□□□ 1.58
PCOLCE-206ENST00000482863 KANK4Q5T7N3 995 aaPredicted RBP24.95■■□□□ 1.58
PCOLCE-206ENST00000482863 RTEL1-TNFRSF6BF6WH68 1400 aa24.95■■□□□ 1.58
PCOLCE-206ENST00000482863 PTPRTO14522 1441 aa24.95■■□□□ 1.58
PCOLCE-206ENST00000482863 PTPRKQ15262 1439 aa24.95■■□□□ 1.58
PCOLCE-206ENST00000482863 NCOA1Q15788 1441 aa24.95■■□□□ 1.58
PCOLCE-206ENST00000482863 DHX29Q7Z478 1369 aaKnown RBP24.94■■□□□ 1.58
PCOLCE-206ENST00000482863 ADGBQ8N7X0 1667 aa24.94■■□□□ 1.58
PCOLCE-206ENST00000482863 VPS8Q8N3P4 1428 aa24.94■■□□□ 1.58
PCOLCE-206ENST00000482863 KIF3BO15066 747 aa24.92■■□□□ 1.58
PCOLCE-206ENST00000482863 CAMSAP1Q5T5Y3 1602 aa24.92■■□□□ 1.58
PCOLCE-206ENST00000482863 CCDC141Q6ZP82 1450 aa24.91■■□□□ 1.58
PCOLCE-206ENST00000482863 LRRC9Q6ZRR7 1453 aa24.9■■□□□ 1.58
PCOLCE-206ENST00000482863 FBXO31Q5XUX0 539 aaPredicted RBP24.88■■□□□ 1.57
PCOLCE-206ENST00000482863 PPP6R1Q9UPN7 881 aa24.86■■□□□ 1.57
PCOLCE-206ENST00000482863 MYO3AQ8NEV4 1616 aa24.86■■□□□ 1.57
PCOLCE-206ENST00000482863 LTBP4Q8N2S1 1624 aa24.84■■□□□ 1.57
PCOLCE-206ENST00000482863 RSPH4AQ5TD94 716 aa24.83■■□□□ 1.57
PCOLCE-206ENST00000482863 TSPY4P0CV99 314 aa24.82■■□□□ 1.56
PCOLCE-206ENST00000482863 TSPY10P0CW01 314 aa24.82■■□□□ 1.56
PCOLCE-206ENST00000482863 CEP170BQ9Y4F5 1589 aaPredicted RBP24.82■■□□□ 1.56
PCOLCE-206ENST00000482863 ZNF335Q9H4Z2 1342 aaPredicted RBP24.8■■□□□ 1.56
PCOLCE-206ENST00000482863 ARHGEF5Q12774 1597 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms