RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
CALD1-220ENST00000482470 MAPKBP1O60336 1514 aa12.33□□□□□ -0.44
CALD1-220ENST00000482470 PRKRIP1Q9H875 184 aaPredicted RBP12.32□□□□□ -0.44
CALD1-220ENST00000482470 CCDC184Q52MB2 194 aa12.31□□□□□ -0.44
CALD1-220ENST00000482470 NPM2Q86SE8 214 aaKnown RBP12.31□□□□□ -0.44
CALD1-220ENST00000482470 PRG4Q92954 1404 aaPredicted RBP12.31□□□□□ -0.44
CALD1-220ENST00000482470 MAP3K1Q13233 1512 aa12.31□□□□□ -0.44
CALD1-220ENST00000482470 PRDM2Q13029 1718 aa12.3□□□□□ -0.44
CALD1-220ENST00000482470 ST20-MTHFSA0A0A6YYL1 179 aa12.3□□□□□ -0.44
CALD1-220ENST00000482470 ZNF608Q9ULD9 1512 aaPredicted RBP12.29□□□□□ -0.44
CALD1-220ENST00000482470 RBM19Q9Y4C8 960 aaKnown RBP12.29□□□□□ -0.44
CALD1-220ENST00000482470 LAMC3Q9Y6N6 1575 aa12.28□□□□□ -0.44
CALD1-220ENST00000482470 C11orf95C9JLR9 678 aaPredicted RBP12.28□□□□□ -0.44
CALD1-220ENST00000482470 EPRSP07814 1512 aaKnown RBP12.28□□□□□ -0.44
CALD1-220ENST00000482470 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
CALD1-220ENST00000482470 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.44
CALD1-220ENST00000482470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.27□□□□□ -0.44
CALD1-220ENST00000482470 KIF7Q2M1P5 1343 aa12.27□□□□□ -0.45
CALD1-220ENST00000482470 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.45
CALD1-220ENST00000482470 PTPRGP23470 1445 aa12.26□□□□□ -0.45
CALD1-220ENST00000482470 PPP4R2Q9NY27 417 aa12.26□□□□□ -0.45
CALD1-220ENST00000482470 EHBP1L1Q8N3D4 1523 aa12.25□□□□□ -0.45
CALD1-220ENST00000482470 CUL7Q14999 1698 aa12.24□□□□□ -0.45
CALD1-220ENST00000482470 ROCK2O75116 1388 aaKnown RBP12.24□□□□□ -0.45
CALD1-220ENST00000482470 CCDC7Q96M83 1385 aa12.24□□□□□ -0.45
CALD1-220ENST00000482470 DAXXQ9UER7 740 aaPredicted RBP12.24□□□□□ -0.45
CALD1-220ENST00000482470 USP47Q96K76 1375 aa12.24□□□□□ -0.45
CALD1-220ENST00000482470 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
CALD1-220ENST00000482470 PLB1Q6P1J6 1458 aa12.21□□□□□ -0.45
CALD1-220ENST00000482470 IQGAP2Q13576 1575 aa12.21□□□□□ -0.45
CALD1-220ENST00000482470 SUPT6HQ7KZ85 1726 aaKnown RBP12.21□□□□□ -0.45
CALD1-220ENST00000482470 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
CALD1-220ENST00000482470 KNSTRNQ9Y448 316 aa12.21□□□□□ -0.46
CALD1-220ENST00000482470 ANKRD50Q9ULJ7 1429 aa12.21□□□□□ -0.46
CALD1-220ENST00000482470 DAPK1P53355 1430 aa12.2□□□□□ -0.46
CALD1-220ENST00000482470 MIA2Q96PC5 1412 aa12.2□□□□□ -0.46
CALD1-220ENST00000482470 EFCAB2Q5VUJ9 269 aa12.2□□□□□ -0.46
CALD1-220ENST00000482470 CANXP27824 592 aaKnown RBP12.19□□□□□ -0.46
CALD1-220ENST00000482470 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
CALD1-220ENST00000482470 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
CALD1-220ENST00000482470 TNNT2P45379 298 aaPredicted RBP12.19□□□□□ -0.46
CALD1-220ENST00000482470 ANO8Q9HCE9 1232 aaPredicted RBP12.19□□□□□ -0.46
CALD1-220ENST00000482470 KIF15Q9NS87 1388 aa12.19□□□□□ -0.46
CALD1-220ENST00000482470 KIAA0586Q9BVV6 1533 aa12.19□□□□□ -0.46
CALD1-220ENST00000482470 NBR1Q14596 966 aa12.18□□□□□ -0.46
CALD1-220ENST00000482470 ABCC5O15440 1437 aa12.18□□□□□ -0.46
CALD1-220ENST00000482470 TMF1P82094 1093 aa12.18□□□□□ -0.46
CALD1-220ENST00000482470 TROQ12816 1431 aaPredicted RBP12.17□□□□□ -0.46
CALD1-220ENST00000482470 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
CALD1-220ENST00000482470 HECW1Q76N89 1606 aa12.17□□□□□ -0.46
CALD1-220ENST00000482470 THOC2Q8NI27 1593 aaKnown RBP12.16□□□□□ -0.46
CALD1-220ENST00000482470 KIF3BO15066 747 aa12.16□□□□□ -0.46
CALD1-220ENST00000482470 CNTLNQ9NXG0 1405 aa12.16□□□□□ -0.46
CALD1-220ENST00000482470 NEUROD2Q15784 382 aa12.16□□□□□ -0.46
CALD1-220ENST00000482470 NBPF1Q3BBV0 1214 aa12.16□□□□□ -0.46
CALD1-220ENST00000482470 GGT6Q6P531 493 aa12.16□□□□□ -0.46
CALD1-220ENST00000482470 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
CALD1-220ENST00000482470 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
CALD1-220ENST00000482470 CCDC144AA2RUR9 1427 aa12.13□□□□□ -0.47
CALD1-220ENST00000482470 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
CALD1-220ENST00000482470 SPAG9O60271 1321 aaKnown RBP12.13□□□□□ -0.47
CALD1-220ENST00000482470 PANK3Q9H999 370 aa12.13□□□□□ -0.47
CALD1-220ENST00000482470 AFAP1Q8N556 730 aa12.13□□□□□ -0.47
CALD1-220ENST00000482470 NUDCQ9Y266 331 aa12.13□□□□□ -0.47
CALD1-220ENST00000482470 GRIN2AQ12879 1464 aa12.12□□□□□ -0.47
CALD1-220ENST00000482470 PLPPR3Q6T4P5 718 aa12.12□□□□□ -0.47
CALD1-220ENST00000482470 ZBED9Q6R2W3 1325 aa12.12□□□□□ -0.47
CALD1-220ENST00000482470 KTN1Q86UP2 1357 aaKnown RBP12.11□□□□□ -0.47
CALD1-220ENST00000482470 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
CALD1-220ENST00000482470 NUTM2DQ5VT03 806 aaPredicted RBP12.11□□□□□ -0.47
CALD1-220ENST00000482470 UGGT2Q9NYU1 1516 aa12.1□□□□□ -0.47
CALD1-220ENST00000482470 CFAP43Q8NDM7 1665 aa12.1□□□□□ -0.47
CALD1-220ENST00000482470 RALBP1Q15311 655 aa12.1□□□□□ -0.47
CALD1-220ENST00000482470 C9orf84Q5VXU9 1444 aa12.1□□□□□ -0.47
CALD1-220ENST00000482470 CTTNBP2Q8WZ74 1663 aa12.1□□□□□ -0.47
CALD1-220ENST00000482470 KIAA1107Q9UPP5 1409 aa12.1□□□□□ -0.47
CALD1-220ENST00000482470 ARHGEF11O15085 1522 aa12.1□□□□□ -0.47
CALD1-220ENST00000482470 NCOA1Q15788 1441 aa12.09□□□□□ -0.47
CALD1-220ENST00000482470 NLRP13Q86W25 1043 aa12.09□□□□□ -0.47
CALD1-220ENST00000482470 ZBTB47Q9UFB7 747 aaPredicted RBP12.09□□□□□ -0.47
CALD1-220ENST00000482470 ROCK1Q13464 1354 aa12.08□□□□□ -0.47
CALD1-220ENST00000482470 RCAN3Q9UKA8 241 aa12.08□□□□□ -0.47
CALD1-220ENST00000482470 KIF21AQ7Z4S6 1674 aa12.08□□□□□ -0.48
CALD1-220ENST00000482470 CDCA8Q53HL2 280 aa12.08□□□□□ -0.48
CALD1-220ENST00000482470 MAGI3Q5TCQ9 1506 aa12.08□□□□□ -0.48
CALD1-220ENST00000482470 NUP153P49790 1475 aaKnown RBP12.08□□□□□ -0.48
CALD1-220ENST00000482470 PLIN1O60240 522 aa12.07□□□□□ -0.48
CALD1-220ENST00000482470 MYBBP1AQ9BQG0 1328 aaKnown RBP12.07□□□□□ -0.48
CALD1-220ENST00000482470 CAMSAP2Q08AD1 1489 aa12.07□□□□□ -0.48
CALD1-220ENST00000482470 AKNAQ7Z591 1439 aa12.06□□□□□ -0.48
CALD1-220ENST00000482470 CCDC146Q8IYE0 955 aa12.05□□□□□ -0.48
CALD1-220ENST00000482470 SYNJ2O15056 1496 aa12.05□□□□□ -0.48
CALD1-220ENST00000482470 GPATCH8Q9UKJ3 1502 aaKnown RBP12.04□□□□□ -0.48
CALD1-220ENST00000482470 KANK1Q14678 1352 aa12.04□□□□□ -0.48
CALD1-220ENST00000482470 RPRD2Q5VT52 1461 aaKnown RBP12.03□□□□□ -0.48
CALD1-220ENST00000482470 ABCA5Q8WWZ7 1642 aa12.03□□□□□ -0.48
CALD1-220ENST00000482470 STK26Q9P289 416 aa12.03□□□□□ -0.48
CALD1-220ENST00000482470 ERICH6BQ5W0A0 696 aa12.03□□□□□ -0.48
CALD1-220ENST00000482470 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.03□□□□□ -0.48
CALD1-220ENST00000482470 EXOC6Q8TAG9 804 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms