RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 POGZQ7Z3K3 1410 aa19.01■□□□□ 0.63
HMGN1-213ENST00000482192 ZMYM4Q5VZL5 1548 aa19.01■□□□□ 0.63
HMGN1-213ENST00000482192 PREX2Q70Z35 1606 aa19■□□□□ 0.63
HMGN1-213ENST00000482192 ARHGEF40Q8TER5 1519 aa19■□□□□ 0.63
HMGN1-213ENST00000482192 MAGI2Q86UL8 1455 aa18.97■□□□□ 0.63
HMGN1-213ENST00000482192 MTUS2Q5JR59 1369 aa18.97■□□□□ 0.63
HMGN1-213ENST00000482192 CDC42BPBQ9Y5S2 1711 aa18.96■□□□□ 0.63
HMGN1-213ENST00000482192 ZFYVE16Q7Z3T8 1539 aa18.95■□□□□ 0.62
HMGN1-213ENST00000482192 ZNF518AQ6AHZ1 1483 aa18.95■□□□□ 0.62
HMGN1-213ENST00000482192 VPS8Q8N3P4 1428 aa18.94■□□□□ 0.62
HMGN1-213ENST00000482192 EHBP1L1Q8N3D4 1523 aa18.94■□□□□ 0.62
HMGN1-213ENST00000482192 CDC42BPAQ5VT25 1732 aa18.93■□□□□ 0.62
HMGN1-213ENST00000482192 GPATCH8Q9UKJ3 1502 aaKnown RBP18.92■□□□□ 0.62
HMGN1-213ENST00000482192 YEATS2Q9ULM3 1422 aa18.91■□□□□ 0.62
HMGN1-213ENST00000482192 ABCC1P33527 1531 aa18.91■□□□□ 0.62
HMGN1-213ENST00000482192 KDM5CP41229 1560 aa18.9■□□□□ 0.62
HMGN1-213ENST00000482192 ARID4BQ4LE39 1312 aaPredicted RBP18.9■□□□□ 0.62
HMGN1-213ENST00000482192 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
HMGN1-213ENST00000482192 TIAM1Q13009 1591 aa18.88■□□□□ 0.61
HMGN1-213ENST00000482192 AFAP1Q8N556 730 aa18.87■□□□□ 0.61
HMGN1-213ENST00000482192 ADAMTSL3P82987 1691 aa18.86■□□□□ 0.61
HMGN1-213ENST00000482192 ITSN2Q9NZM3 1697 aa18.86■□□□□ 0.61
HMGN1-213ENST00000482192 HECW2Q9P2P5 1572 aa18.86■□□□□ 0.61
HMGN1-213ENST00000482192 ARHGEF12Q9NZN5 1544 aa18.86■□□□□ 0.61
HMGN1-213ENST00000482192 BCORL1Q5H9F3 1711 aa18.86■□□□□ 0.61
HMGN1-213ENST00000482192 SAMD9LQ8IVG5 1584 aa18.85■□□□□ 0.61
HMGN1-213ENST00000482192 ATP10AO60312 1499 aa18.85■□□□□ 0.61
HMGN1-213ENST00000482192 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-213ENST00000482192 ZNF777Q9ULD5 760 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-213ENST00000482192 C9orf84Q5VXU9 1444 aa18.84■□□□□ 0.61
HMGN1-213ENST00000482192 TRAPPC8Q9Y2L5 1435 aa18.84■□□□□ 0.61
HMGN1-213ENST00000482192 PLEKHH2Q8IVE3 1493 aa18.84■□□□□ 0.61
HMGN1-213ENST00000482192 MLH3Q9UHC1 1453 aa18.84■□□□□ 0.61
HMGN1-213ENST00000482192 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
HMGN1-213ENST00000482192 SYCP2Q9BX26 1530 aa18.82■□□□□ 0.6
HMGN1-213ENST00000482192 KIAA1107Q9UPP5 1409 aa18.82■□□□□ 0.6
HMGN1-213ENST00000482192 MAP3K1Q13233 1512 aa18.81■□□□□ 0.6
HMGN1-213ENST00000482192 SUPT6HQ7KZ85 1726 aaKnown RBP18.81■□□□□ 0.6
HMGN1-213ENST00000482192 NCOA2Q15596 1464 aa18.81■□□□□ 0.6
HMGN1-213ENST00000482192 SIGLEC1Q9BZZ2 1709 aa18.8■□□□□ 0.6
HMGN1-213ENST00000482192 LRRC9Q6ZRR7 1453 aa18.8■□□□□ 0.6
HMGN1-213ENST00000482192 MADDQ8WXG6 1647 aa18.8■□□□□ 0.6
HMGN1-213ENST00000482192 DIP2CQ9Y2E4 1556 aa18.8■□□□□ 0.6
HMGN1-213ENST00000482192 PTPRMP28827 1452 aa18.79■□□□□ 0.6
HMGN1-213ENST00000482192 ABCA6Q8N139 1617 aa18.78■□□□□ 0.6
HMGN1-213ENST00000482192 REREQ9P2R6 1566 aa18.77■□□□□ 0.6
HMGN1-213ENST00000482192 HNRNPMP52272 730 aaKnown RBP eCLIP18.76■□□□□ 0.59
HMGN1-213ENST00000482192 KIDINS220Q9ULH0 1771 aa18.74■□□□□ 0.59
HMGN1-213ENST00000482192 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
HMGN1-213ENST00000482192 MLECQ14165 292 aa18.73■□□□□ 0.59
HMGN1-213ENST00000482192 ZNF644Q9H582 1327 aaPredicted RBP18.73■□□□□ 0.59
HMGN1-213ENST00000482192 RIMS1Q86UR5 1692 aaKnown RBP18.73■□□□□ 0.59
HMGN1-213ENST00000482192 ATP7AQ04656 1500 aa18.71■□□□□ 0.59
HMGN1-213ENST00000482192 APLP2Q06481 763 aa18.71■□□□□ 0.59
HMGN1-213ENST00000482192 KANK4Q5T7N3 995 aaPredicted RBP18.71■□□□□ 0.59
HMGN1-213ENST00000482192 INO80Q9ULG1 1556 aaPredicted RBP18.71■□□□□ 0.59
HMGN1-213ENST00000482192 MBD5Q9P267 1494 aa18.71■□□□□ 0.59
HMGN1-213ENST00000482192 AGLP35573 1532 aa18.7■□□□□ 0.58
HMGN1-213ENST00000482192 CAMSAP2Q08AD1 1489 aa18.7■□□□□ 0.58
HMGN1-213ENST00000482192 FER1L4A9Z1Z3 1794 aa18.69■□□□□ 0.58
HMGN1-213ENST00000482192 CCDC141Q6ZP82 1450 aa18.65■□□□□ 0.58
HMGN1-213ENST00000482192 MYOM3Q5VTT5 1437 aa18.65■□□□□ 0.58
HMGN1-213ENST00000482192 RSPH4AQ5TD94 716 aa18.64■□□□□ 0.57
HMGN1-213ENST00000482192 RTEL1-TNFRSF6BF6WH68 1400 aa18.64■□□□□ 0.57
HMGN1-213ENST00000482192 MIA2Q96PC5 1412 aa18.63■□□□□ 0.57
HMGN1-213ENST00000482192 A2MP01023 1474 aa18.63■□□□□ 0.57
HMGN1-213ENST00000482192 PLXNC1O60486 1568 aa18.63■□□□□ 0.57
HMGN1-213ENST00000482192 ARHGEF5Q12774 1597 aa18.62■□□□□ 0.57
HMGN1-213ENST00000482192 ADGBQ8N7X0 1667 aa18.6■□□□□ 0.57
HMGN1-213ENST00000482192 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
HMGN1-213ENST00000482192 ESF1Q9H501 851 aaKnown RBP18.59■□□□□ 0.57
HMGN1-213ENST00000482192 LMTK3Q96Q04 1460 aa18.58■□□□□ 0.56
HMGN1-213ENST00000482192 CNTLNQ9NXG0 1405 aa18.57■□□□□ 0.56
HMGN1-213ENST00000482192 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
HMGN1-213ENST00000482192 TSPY10P0CW01 314 aa18.56■□□□□ 0.56
HMGN1-213ENST00000482192 CEBPAP49715 358 aaPredicted RBP18.54■□□□□ 0.56
HMGN1-213ENST00000482192 DHX29Q7Z478 1369 aaKnown RBP18.54■□□□□ 0.56
HMGN1-213ENST00000482192 MAST1Q9Y2H9 1570 aa18.52■□□□□ 0.56
HMGN1-213ENST00000482192 PTPN23Q9H3S7 1636 aa18.51■□□□□ 0.55
HMGN1-213ENST00000482192 C3P01024 1663 aa18.5■□□□□ 0.55
HMGN1-213ENST00000482192 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
HMGN1-213ENST00000482192 MROH2AA6NES4 1674 aa18.5■□□□□ 0.55
HMGN1-213ENST00000482192 GGT6Q6P531 493 aa18.49■□□□□ 0.55
HMGN1-213ENST00000482192 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
HMGN1-213ENST00000482192 PREX1Q8TCU6 1659 aa18.49■□□□□ 0.55
HMGN1-213ENST00000482192 TCOF1Q13428 1488 aaKnown RBP18.48■□□□□ 0.55
HMGN1-213ENST00000482192 SHANK2Q9UPX8 1470 aa18.46■□□□□ 0.55
HMGN1-213ENST00000482192 KIF3BO15066 747 aa18.46■□□□□ 0.55
HMGN1-213ENST00000482192 CLTCQ00610 1675 aaKnown RBP18.46■□□□□ 0.55
HMGN1-213ENST00000482192 UHRF1BP1Q6BDS2 1440 aa18.46■□□□□ 0.55
HMGN1-213ENST00000482192 ZMYM3Q14202 1370 aa18.45■□□□□ 0.54
HMGN1-213ENST00000482192 CROCC2H7BZ55 1655 aa18.44■□□□□ 0.54
HMGN1-213ENST00000482192 ABCC5O15440 1437 aa18.44■□□□□ 0.54
HMGN1-213ENST00000482192 NPATQ14207 1427 aa18.44■□□□□ 0.54
HMGN1-213ENST00000482192 HSPA2P54652 639 aa18.44■□□□□ 0.54
HMGN1-213ENST00000482192 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
HMGN1-213ENST00000482192 DAPK1P53355 1430 aa18.43■□□□□ 0.54
HMGN1-213ENST00000482192 DNMT1P26358 1616 aaKnown RBP18.43■□□□□ 0.54
HMGN1-213ENST00000482192 KDM5DQ9BY66 1539 aa18.41■□□□□ 0.54
HMGN1-213ENST00000482192 EIF2AK4Q9P2K8 1649 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms