RNA–Protein interactions for RNA: ENST00000481756.7

TVP23C-CDRT4-201, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 4

Gene TVP23C-CDRT4, Length 556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-201ENST00000481756 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
TVP23C-CDRT4-201ENST00000481756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.13□□□□□ -0.471e-7■□□□□ 8.3
TVP23C-CDRT4-201ENST00000481756 NEO1Q92859 1461 aa12.12□□□□□ -0.47
TVP23C-CDRT4-201ENST00000481756 ARHGEF12Q9NZN5 1544 aa12.11□□□□□ -0.47
TVP23C-CDRT4-201ENST00000481756 TOM1O60784 492 aa12.11□□□□□ -0.47
TVP23C-CDRT4-201ENST00000481756 PIP4K2BP78356 416 aa12.11□□□□□ -0.47
TVP23C-CDRT4-201ENST00000481756 SETD1AO15047 1707 aaKnown RBP12.1□□□□□ -0.47
TVP23C-CDRT4-201ENST00000481756 CEBPAP49715 358 aaPredicted RBP12.08□□□□□ -0.48
TVP23C-CDRT4-201ENST00000481756 KCNH8Q96L42 1107 aa12.08□□□□□ -0.48
TVP23C-CDRT4-201ENST00000481756 DISP1Q96F81 1524 aa12.07□□□□□ -0.48
TVP23C-CDRT4-201ENST00000481756 AKNAQ7Z591 1439 aa12.07□□□□□ -0.48
TVP23C-CDRT4-201ENST00000481756 ALKQ9UM73 1620 aa12.07□□□□□ -0.48
TVP23C-CDRT4-201ENST00000481756 KIAA0556O60303 1618 aa12.06□□□□□ -0.48
TVP23C-CDRT4-201ENST00000481756 FHOD3Q2V2M9 1422 aa12.03□□□□□ -0.48
TVP23C-CDRT4-201ENST00000481756 ZMYM4Q5VZL5 1548 aa12.01□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 ABCA9Q8IUA7 1624 aa12.01□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 RICTORQ6R327 1708 aa12.01□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 MLECQ14165 292 aa11.99□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 PTPRKQ15262 1439 aa11.99□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 BIVM-ERCC5R4GMW8 1640 aa11.99□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 CAMSAP1Q5T5Y3 1602 aa11.98□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 EFCAB5A4FU69 1503 aa11.98□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 MAGI2Q86UL8 1455 aa11.98□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 CPS1P31327 1500 aa11.97□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 ZFYVE16Q7Z3T8 1539 aa11.97□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 IQGAP2Q13576 1575 aa11.96□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 DENND4BO75064 1496 aaPredicted RBP11.96□□□□□ -0.49
TVP23C-CDRT4-201ENST00000481756 TRAPPC8Q9Y2L5 1435 aa11.95□□□□□ -0.5
TVP23C-CDRT4-201ENST00000481756 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
TVP23C-CDRT4-201ENST00000481756 PLA2R1Q13018 1463 aa11.94□□□□□ -0.5
TVP23C-CDRT4-201ENST00000481756 TCOF1Q13428 1488 aaKnown RBP11.94□□□□□ -0.5
TVP23C-CDRT4-201ENST00000481756 NCKAP5LQ9HCH0 1330 aa11.93□□□□□ -0.5
TVP23C-CDRT4-201ENST00000481756 PKD2Q13563 968 aa11.92□□□□□ -0.5
TVP23C-CDRT4-201ENST00000481756 C3P01024 1663 aa11.91□□□□□ -0.5
TVP23C-CDRT4-201ENST00000481756 UGGT2Q9NYU1 1516 aa11.9□□□□□ -0.5
TVP23C-CDRT4-201ENST00000481756 IGF1RP08069 1367 aa11.9□□□□□ -0.5
TVP23C-CDRT4-201ENST00000481756 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
TVP23C-CDRT4-201ENST00000481756 ABCA8O94911 1581 aa11.89□□□□□ -0.51
TVP23C-CDRT4-201ENST00000481756 ATP10AO60312 1499 aa11.87□□□□□ -0.51
TVP23C-CDRT4-201ENST00000481756 KCNA4P22459 653 aa11.86□□□□□ -0.51
TVP23C-CDRT4-201ENST00000481756 SHANK2Q9UPX8 1470 aa11.86□□□□□ -0.51
TVP23C-CDRT4-201ENST00000481756 C9orf84Q5VXU9 1444 aa11.86□□□□□ -0.51
TVP23C-CDRT4-201ENST00000481756 HECW1Q76N89 1606 aa11.83□□□□□ -0.52
TVP23C-CDRT4-201ENST00000481756 NPATQ14207 1427 aa11.83□□□□□ -0.52
TVP23C-CDRT4-201ENST00000481756 SETBP1Q9Y6X0 1596 aa11.83□□□□□ -0.52
TVP23C-CDRT4-201ENST00000481756 RBM33Q96EV2 1170 aaKnown RBP11.8□□□□□ -0.52
TVP23C-CDRT4-201ENST00000481756 LRRC7Q96NW7 1537 aa11.8□□□□□ -0.52
TVP23C-CDRT4-201ENST00000481756 CDK12Q9NYV4 1490 aaPredicted RBP11.79□□□□□ -0.52
TVP23C-CDRT4-201ENST00000481756 ZNF142P52746 1687 aaPredicted RBP11.78□□□□□ -0.52
TVP23C-CDRT4-201ENST00000481756 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
TVP23C-CDRT4-201ENST00000481756 ATP10BO94823 1461 aa11.77□□□□□ -0.52
TVP23C-CDRT4-201ENST00000481756 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 RNF17Q9BXT8 1623 aaKnown RBP11.77□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 VWDEQ8N2E2 1590 aa11.76□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 CFAP74Q9C0B2 1584 aa11.76□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 DSG3P32926 999 aa11.76□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 AGLP35573 1532 aa11.76□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 SLC4A2P04920 1241 aa11.74□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 TRIM52Q96A61 297 aa11.73□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 CNTLNQ9NXG0 1405 aa11.73□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 REREQ9P2R6 1566 aa11.73□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 LRP5O75197 1615 aa11.72□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 NEURL4Q96JN8 1562 aa11.71□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 CEP170BQ9Y4F5 1589 aaPredicted RBP11.71□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 FAM135BQ49AJ0 1406 aa11.71□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 CAPN15O75808 1086 aa11.71□□□□□ -0.53
TVP23C-CDRT4-201ENST00000481756 MYO3AQ8NEV4 1616 aa11.7□□□□□ -0.54
TVP23C-CDRT4-201ENST00000481756 ZNF772Q68DY9 489 aaPredicted RBP11.69□□□□□ -0.54
TVP23C-CDRT4-201ENST00000481756 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
TVP23C-CDRT4-201ENST00000481756 CEP350Q5VT06 3117 aa11.68□□□□□ -0.54
TVP23C-CDRT4-201ENST00000481756 SYNMO15061 1565 aa11.67□□□□□ -0.54
TVP23C-CDRT4-201ENST00000481756 MROH2AA6NES4 1674 aa11.66□□□□□ -0.54
TVP23C-CDRT4-201ENST00000481756 EP400Q96L91 3159 aa11.66□□□□□ -0.54
TVP23C-CDRT4-201ENST00000481756 SUPT6HQ7KZ85 1726 aaKnown RBP11.66□□□□□ -0.54
TVP23C-CDRT4-201ENST00000481756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.65□□□□□ -0.54
TVP23C-CDRT4-201ENST00000481756 RXRBP28702 533 aa11.65□□□□□ -0.54
TVP23C-CDRT4-201ENST00000481756 SCAPERQ9BY12 1400 aa11.65□□□□□ -0.54
TVP23C-CDRT4-201ENST00000481756 ESF1Q9H501 851 aaKnown RBP11.64□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 GOLGA3Q08378 1498 aa11.63□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 RAPGEF6Q8TEU7 1601 aa11.62□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 YY1P25490 414 aa11.62□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 DIP2CQ9Y2E4 1556 aa11.62□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 CDK13Q14004 1512 aaKnown RBP11.6□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 STRCP1A6NGW2 1772 aa11.6□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 MED14O60244 1454 aa11.6□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 DNMT1P26358 1616 aaKnown RBP11.6□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 KDM5CP41229 1560 aa11.59□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 A2ML1A8K2U0 1454 aa11.59□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 JCADQ9P266 1359 aa11.59□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 LRP6O75581 1613 aa11.59□□□□□ -0.55
TVP23C-CDRT4-201ENST00000481756 ARID3CA6NKF2 412 aa11.58□□□□□ -0.56
TVP23C-CDRT4-201ENST00000481756 RGS12O14924 1447 aa11.58□□□□□ -0.56
TVP23C-CDRT4-201ENST00000481756 ZNF518AQ6AHZ1 1483 aa11.57□□□□□ -0.56
TVP23C-CDRT4-201ENST00000481756 SLC34A2O95436 690 aa11.56□□□□□ -0.56
TVP23C-CDRT4-201ENST00000481756 APLP2Q06481 763 aa11.56□□□□□ -0.56
TVP23C-CDRT4-201ENST00000481756 SENP3-EIF4A1A0A087X0R7 540 aa11.55□□□□□ -0.56
TVP23C-CDRT4-201ENST00000481756 NHSL1Q5SYE7 1610 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms