RNA–Protein interactions for RNA: ENST00000481168.1

RPN1-204, Transcript of ribophorin I, humanhuman

TSL 2

Gene RPN1, Length 751 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-204ENST00000481168 ARHGEF12Q9NZN5 1544 aa21.94■■□□□ 1.1
RPN1-204ENST00000481168 LTBP4Q8N2S1 1624 aa21.92■■□□□ 1.1
RPN1-204ENST00000481168 IQSEC2Q5JU85 1478 aa21.92■■□□□ 1.1
RPN1-204ENST00000481168 RAPGEF6Q8TEU7 1601 aa21.91■■□□□ 1.1
RPN1-204ENST00000481168 UBAP1LF5GYI3 381 aa21.91■■□□□ 1.1
RPN1-204ENST00000481168 HECW1Q76N89 1606 aa21.91■■□□□ 1.1
RPN1-204ENST00000481168 CFAP74Q9C0B2 1584 aa21.91■■□□□ 1.1
RPN1-204ENST00000481168 ATP10AO60312 1499 aa21.9■■□□□ 1.1
RPN1-204ENST00000481168 SETD1BQ9UPS6 1966 aaKnown RBP21.88■■□□□ 1.09
RPN1-204ENST00000481168 SCAPERQ9BY12 1400 aa21.88■■□□□ 1.09
RPN1-204ENST00000481168 NUP153P49790 1475 aaKnown RBP21.87■■□□□ 1.09
RPN1-204ENST00000481168 C9orf84Q5VXU9 1444 aa21.87■■□□□ 1.09
RPN1-204ENST00000481168 PRXQ9BXM0 1461 aa21.84■■□□□ 1.09
RPN1-204ENST00000481168 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.84■■□□□ 1.096e-13■■■■□ 25
RPN1-204ENST00000481168 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
RPN1-204ENST00000481168 ESF1Q9H501 851 aaKnown RBP21.78■■□□□ 1.08
RPN1-204ENST00000481168 MYT1LQ9UL68 1186 aa21.78■■□□□ 1.08
RPN1-204ENST00000481168 NCOA1Q15788 1441 aa21.77■■□□□ 1.08
RPN1-204ENST00000481168 ZNF335Q9H4Z2 1342 aaPredicted RBP21.77■■□□□ 1.07
RPN1-204ENST00000481168 SAMD9Q5K651 1589 aa21.75■■□□□ 1.07
RPN1-204ENST00000481168 TRAPPC8Q9Y2L5 1435 aa21.74■■□□□ 1.07
RPN1-204ENST00000481168 PLCH2O75038 1416 aa21.73■■□□□ 1.07
RPN1-204ENST00000481168 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
RPN1-204ENST00000481168 SCAF1Q9H7N4 1312 aaKnown RBP21.73■■□□□ 1.07
RPN1-204ENST00000481168 HSPA1LP34931 641 aa21.72■■□□□ 1.07
RPN1-204ENST00000481168 NCKAP5LQ9HCH0 1330 aa21.72■■□□□ 1.07
RPN1-204ENST00000481168 AFAP1Q8N556 730 aa21.7■■□□□ 1.06
RPN1-204ENST00000481168 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
RPN1-204ENST00000481168 MED1Q15648 1581 aaPredicted RBP21.7■■□□□ 1.06
RPN1-204ENST00000481168 C3P01024 1663 aa21.67■■□□□ 1.06
RPN1-204ENST00000481168 PIP4K2BP78356 416 aa21.67■■□□□ 1.06
RPN1-204ENST00000481168 CAMSAP1Q5T5Y3 1602 aa21.66■■□□□ 1.06
RPN1-204ENST00000481168 ZNF518AQ6AHZ1 1483 aa21.64■■□□□ 1.05
RPN1-204ENST00000481168 PKD2Q13563 968 aa21.59■■□□□ 1.05
RPN1-204ENST00000481168 TOM1O60784 492 aa21.58■■□□□ 1.05
RPN1-204ENST00000481168 CDK13Q14004 1512 aaKnown RBP21.58■■□□□ 1.04
RPN1-204ENST00000481168 DIP2CQ9Y2E4 1556 aa21.57■■□□□ 1.04
RPN1-204ENST00000481168 CNTLNQ9NXG0 1405 aa21.56■■□□□ 1.04
RPN1-204ENST00000481168 ATP1B4Q9UN42 357 aaPredicted RBP21.55■■□□□ 1.04
RPN1-204ENST00000481168 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
RPN1-204ENST00000481168 KDM5CP41229 1560 aa21.54■■□□□ 1.04
RPN1-204ENST00000481168 REREQ9P2R6 1566 aa21.54■■□□□ 1.04
RPN1-204ENST00000481168 CSRNP3Q8WYN3 585 aa21.54■■□□□ 1.04
RPN1-204ENST00000481168 AGLP35573 1532 aa21.54■■□□□ 1.04
RPN1-204ENST00000481168 NPATQ14207 1427 aa21.54■■□□□ 1.04
RPN1-204ENST00000481168 ARHGAP5Q13017 1502 aa21.5■■□□□ 1.03
RPN1-204ENST00000481168 ZMYM3Q14202 1370 aa21.5■■□□□ 1.03
RPN1-204ENST00000481168 MYO5CQ9NQX4 1742 aa21.5■■□□□ 1.03
RPN1-204ENST00000481168 MLH3Q9UHC1 1453 aa21.5■■□□□ 1.03
RPN1-204ENST00000481168 ABCA6Q8N139 1617 aa21.49■■□□□ 1.03
RPN1-204ENST00000481168 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
RPN1-204ENST00000481168 PLA2R1Q13018 1463 aa21.47■■□□□ 1.03
RPN1-204ENST00000481168 SENP3Q9H4L4 574 aaPredicted RBP21.46■■□□□ 1.03
RPN1-204ENST00000481168 TCOF1Q13428 1488 aaKnown RBP21.45■■□□□ 1.03
RPN1-204ENST00000481168 KIF14Q15058 1648 aa21.4■■□□□ 1.02
RPN1-204ENST00000481168 CEP170BQ9Y4F5 1589 aaPredicted RBP21.37■■□□□ 1.01
RPN1-204ENST00000481168 CPS1P31327 1500 aa21.37■■□□□ 1.01
RPN1-204ENST00000481168 MROH2AA6NES4 1674 aa21.37■■□□□ 1.01
RPN1-204ENST00000481168 TROQ12816 1431 aaPredicted RBP21.36■■□□□ 1.01
RPN1-204ENST00000481168 PTPRKQ15262 1439 aa21.36■■□□□ 1.01
RPN1-204ENST00000481168 SHANK2Q9UPX8 1470 aa21.35■■□□□ 1.01
RPN1-204ENST00000481168 RGS17Q9UGC6 210 aaPredicted RBP21.35■■□□□ 1.01
RPN1-204ENST00000481168 MYO3AQ8NEV4 1616 aa21.35■■□□□ 1.01
RPN1-204ENST00000481168 CLIP1P30622 1438 aa21.35■■□□□ 1.01
RPN1-204ENST00000481168 SUPT6HQ7KZ85 1726 aaKnown RBP21.35■■□□□ 1.01
RPN1-204ENST00000481168 ZNF142P52746 1687 aaPredicted RBP21.34■■□□□ 1.01
RPN1-204ENST00000481168 KIDINS220Q9ULH0 1771 aa21.31■■□□□ 1
RPN1-204ENST00000481168 GGT6Q6P531 493 aa21.31■■□□□ 1
RPN1-204ENST00000481168 ABCC1P33527 1531 aa21.29■■□□□ 1
RPN1-204ENST00000481168 CLTCQ00610 1675 aaKnown RBP21.28■■□□□ 1
RPN1-204ENST00000481168 FMN1Q68DA7 1419 aa21.27■■□□□ 1
RPN1-204ENST00000481168 SPAG9O60271 1321 aaKnown RBP21.27■□□□□ 0.99
RPN1-204ENST00000481168 CDC42BPBQ9Y5S2 1711 aa21.26■□□□□ 0.99
RPN1-204ENST00000481168 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
RPN1-204ENST00000481168 ZNF777Q9ULD5 760 aaPredicted RBP21.25■□□□□ 0.99
RPN1-204ENST00000481168 ITSN2Q9NZM3 1697 aa21.24■□□□□ 0.99
RPN1-204ENST00000481168 ANKLE2Q86XL3 938 aa21.24■□□□□ 0.99
RPN1-204ENST00000481168 ALKQ9UM73 1620 aa21.24■□□□□ 0.99
RPN1-204ENST00000481168 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
RPN1-204ENST00000481168 POTEAQ6S8J7 498 aa21.21■□□□□ 0.99
RPN1-204ENST00000481168 SAMD9LQ8IVG5 1584 aa21.2■□□□□ 0.98
RPN1-204ENST00000481168 NEURL4Q96JN8 1562 aa21.19■□□□□ 0.98
RPN1-204ENST00000481168 PREX2Q70Z35 1606 aa21.19■□□□□ 0.98
RPN1-204ENST00000481168 HNRNPMP52272 730 aaKnown RBP eCLIP21.19■□□□□ 0.98
RPN1-204ENST00000481168 VWDEQ8N2E2 1590 aa21.18■□□□□ 0.98
RPN1-204ENST00000481168 A2MP01023 1474 aa21.17■□□□□ 0.98
RPN1-204ENST00000481168 EEA1Q15075 1411 aa21.16■□□□□ 0.98
RPN1-204ENST00000481168 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.16■□□□□ 0.98
RPN1-204ENST00000481168 POLR1AO95602 1720 aaPredicted RBP21.15■□□□□ 0.98
RPN1-204ENST00000481168 TNRQ92752 1358 aa21.15■□□□□ 0.98
RPN1-204ENST00000481168 FBXO31Q5XUX0 539 aaPredicted RBP21.15■□□□□ 0.98
RPN1-204ENST00000481168 EHMT2Q96KQ7 1210 aa21.15■□□□□ 0.98
RPN1-204ENST00000481168 THEMISQ8N1K5 641 aaPredicted RBP21.14■□□□□ 0.97
RPN1-204ENST00000481168 NPHP4O75161 1426 aaPredicted RBP21.13■□□□□ 0.97
RPN1-204ENST00000481168 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
RPN1-204ENST00000481168 PLXNC1O60486 1568 aa21.1■□□□□ 0.97
RPN1-204ENST00000481168 ATP7AQ04656 1500 aa21.1■□□□□ 0.97
RPN1-204ENST00000481168 LRRC7Q96NW7 1537 aa21.1■□□□□ 0.97
RPN1-204ENST00000481168 SYCP2Q9BX26 1530 aa21.1■□□□□ 0.97
RPN1-204ENST00000481168 ARHGAP35Q9NRY4 1499 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms