RNA–Protein interactions for RNA: ENST00000480907.5

NUB1-208, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 5

Gene NUB1, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-208ENST00000480907 CRISPLD2Q9H0B8 497 aa13.94□□□□□ -0.18
NUB1-208ENST00000480907 KIF3CO14782 793 aa13.89□□□□□ -0.19
NUB1-208ENST00000480907 C3orf67Q6ZVT6 689 aa13.88□□□□□ -0.19
NUB1-208ENST00000480907 GPHNQ9NQX3 736 aaPredicted RBP13.87□□□□□ -0.19
NUB1-208ENST00000480907 PDE4AP27815 886 aa13.86□□□□□ -0.19
NUB1-208ENST00000480907 MFSD10Q14728 455 aa13.85□□□□□ -0.19
NUB1-208ENST00000480907 LARP6Q9BRS8 491 aaKnown RBP13.85□□□□□ -0.19
NUB1-208ENST00000480907 C2orf72A6NCS6 295 aa13.84□□□□□ -0.19
NUB1-208ENST00000480907 LHX8Q68G74 356 aa13.84□□□□□ -0.19
NUB1-208ENST00000480907 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.84□□□□□ -0.19
NUB1-208ENST00000480907 TMC2Q8TDI7 906 aa13.82□□□□□ -0.2
NUB1-208ENST00000480907 MAMSTRQ6ZN01 415 aa13.8□□□□□ -0.2
NUB1-208ENST00000480907 OTUD5Q96G74 571 aa13.8□□□□□ -0.2
NUB1-208ENST00000480907 DSG2Q14126 1118 aa13.79□□□□□ -0.2
NUB1-208ENST00000480907 DDX27Q96GQ7 796 aaKnown RBP13.79□□□□□ -0.2
NUB1-208ENST00000480907 FOXK1P85037 733 aa13.78□□□□□ -0.2
NUB1-208ENST00000480907 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
NUB1-208ENST00000480907 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
NUB1-208ENST00000480907 WDR70Q9NW82 654 aa13.75□□□□□ -0.21
NUB1-208ENST00000480907 SLAIN1Q8ND83 568 aa13.73□□□□□ -0.21
NUB1-208ENST00000480907 PLPP6Q8IY26 295 aa13.72□□□□□ -0.21
NUB1-208ENST00000480907 CAMK2BQ13554 666 aa13.7□□□□□ -0.22
NUB1-208ENST00000480907 E2F4Q16254 413 aa13.67□□□□□ -0.22
NUB1-208ENST00000480907 KCNV2Q8TDN2 545 aa13.67□□□□□ -0.22
NUB1-208ENST00000480907 EMILIN3Q9NT22 766 aa13.64□□□□□ -0.23
NUB1-208ENST00000480907 HOXB3P14651 431 aaPredicted RBP13.61□□□□□ -0.23
NUB1-208ENST00000480907 SLC34A2O95436 690 aa13.58□□□□□ -0.24
NUB1-208ENST00000480907 P3H3Q8IVL6 736 aa13.58□□□□□ -0.24
NUB1-208ENST00000480907 ARIH1Q9Y4X5 557 aaPredicted RBP13.58□□□□□ -0.24
NUB1-208ENST00000480907 OXER1Q8TDS5 423 aa13.57□□□□□ -0.24
NUB1-208ENST00000480907 PTCD2Q8WV60 388 aaKnown RBP13.55□□□□□ -0.24
NUB1-208ENST00000480907 ARHGEF1Q92888 912 aaKnown RBP13.55□□□□□ -0.24
NUB1-208ENST00000480907 DPYSL4O14531 572 aa13.52□□□□□ -0.25
NUB1-208ENST00000480907 UPF1Q92900 1129 aaKnown RBP eCLIP13.52□□□□□ -0.25
NUB1-208ENST00000480907 DOK7Q18PE1 504 aa13.5□□□□□ -0.25
NUB1-208ENST00000480907 PCDHGA4Q9Y5G9 962 aa13.48□□□□□ -0.25
NUB1-208ENST00000480907 SNPHO15079 494 aa13.47□□□□□ -0.25
NUB1-208ENST00000480907 MAP3K9P80192 1104 aa13.45□□□□□ -0.26
NUB1-208ENST00000480907 GPR153Q6NV75 609 aa13.45□□□□□ -0.26
NUB1-208ENST00000480907 KDM4FA0A1W2PPD8 638 aa13.44□□□□□ -0.26
NUB1-208ENST00000480907 PDIA6Q15084 440 aa13.44□□□□□ -0.26
NUB1-208ENST00000480907 ZSWIM6Q9HCJ5 1215 aa13.44□□□□□ -0.26
NUB1-208ENST00000480907 KHSRPQ92945 711 aaKnown RBP eCLIP13.43□□□□□ -0.26
NUB1-208ENST00000480907 TBC1D12O60347 775 aa13.42□□□□□ -0.26
NUB1-208ENST00000480907 ARSIQ5FYB1 569 aa13.42□□□□□ -0.26
NUB1-208ENST00000480907 ZNF710Q8N1W2 664 aa13.41□□□□□ -0.26
NUB1-208ENST00000480907 RIMBP2O15034 1052 aa13.4□□□□□ -0.26
NUB1-208ENST00000480907 EVI5O60447 810 aa13.4□□□□□ -0.26
NUB1-208ENST00000480907 SPDYE16A6NNV3 312 aaPredicted RBP13.39□□□□□ -0.27
NUB1-208ENST00000480907 SEMA3EO15041 775 aa13.39□□□□□ -0.27
NUB1-208ENST00000480907 BCANQ96GW7 911 aa13.38□□□□□ -0.27
NUB1-208ENST00000480907 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
NUB1-208ENST00000480907 HOXB1P14653 301 aaPredicted RBP13.37□□□□□ -0.27
NUB1-208ENST00000480907 NUDT7P0C024 238 aa13.36□□□□□ -0.27
NUB1-208ENST00000480907 NBR1Q14596 966 aa13.36□□□□□ -0.27
NUB1-208ENST00000480907 ST18O60284 1047 aa13.35□□□□□ -0.27
NUB1-208ENST00000480907 LCE2DQ5TA82 110 aaPredicted RBP13.35□□□□□ -0.27
NUB1-208ENST00000480907 TESPA1A2RU30 521 aaPredicted RBP13.34□□□□□ -0.27
NUB1-208ENST00000480907 MLLT3P42568 568 aaPredicted RBP13.32□□□□□ -0.28
NUB1-208ENST00000480907 PTGER2P43116 358 aa13.32□□□□□ -0.28
NUB1-208ENST00000480907 FAM163AQ96GL9 167 aaPredicted RBP13.32□□□□□ -0.28
NUB1-208ENST00000480907 LHX6Q9UPM6 363 aa13.27□□□□□ -0.29
NUB1-208ENST00000480907 ZNF316A6NFI3 1004 aaPredicted RBP13.26□□□□□ -0.29
NUB1-208ENST00000480907 DDX12PQ92771 950 aa13.26□□□□□ -0.29
NUB1-208ENST00000480907 GRXCR2A6NFK2 248 aa13.23□□□□□ -0.29
NUB1-208ENST00000480907 MARVELD3Q96A59 401 aa13.23□□□□□ -0.29
NUB1-208ENST00000480907 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
NUB1-208ENST00000480907 PCDHGA10Q9Y5H3 936 aa13.22□□□□□ -0.29
NUB1-208ENST00000480907 OSBPP22059 807 aa13.21□□□□□ -0.29
NUB1-208ENST00000480907 FOSBP53539 338 aa13.21□□□□□ -0.29
NUB1-208ENST00000480907 JPH4Q96JJ6 628 aa13.21□□□□□ -0.29
NUB1-208ENST00000480907 PHF14O94880 888 aa13.2□□□□□ -0.3
NUB1-208ENST00000480907 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
NUB1-208ENST00000480907 EMP3P54852 163 aa13.17□□□□□ -0.3
NUB1-208ENST00000480907 ZNF454Q8N9F8 522 aa13.17□□□□□ -0.3
NUB1-208ENST00000480907 SMYD5Q6GMV2 418 aa13.16□□□□□ -0.3
NUB1-208ENST00000480907 RBM26Q5T8P6 1007 aaKnown RBP13.15□□□□□ -0.3
NUB1-208ENST00000480907 EPAS1Q99814 870 aa13.15□□□□□ -0.3
NUB1-208ENST00000480907 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
NUB1-208ENST00000480907 TYW1BQ6NUM6 668 aa13.14□□□□□ -0.31
NUB1-208ENST00000480907 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
NUB1-208ENST00000480907 ERBB3P21860 1342 aa13.13□□□□□ -0.31
NUB1-208ENST00000480907 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
NUB1-208ENST00000480907 VARS2Q5ST30 1063 aaKnown RBP13.12□□□□□ -0.31
NUB1-208ENST00000480907 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
NUB1-208ENST00000480907 ZDHHC16Q969W1 377 aa13.12□□□□□ -0.31
NUB1-208ENST00000480907 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
NUB1-208ENST00000480907 EN1Q05925 392 aaPredicted RBP13.11□□□□□ -0.31
NUB1-208ENST00000480907 ADAM33Q9BZ11 813 aa13.11□□□□□ -0.31
NUB1-208ENST00000480907 PPP4R3BQ5MIZ7 849 aa13.1□□□□□ -0.31
NUB1-208ENST00000480907 FBXW7Q969H0 707 aa13.1□□□□□ -0.31
NUB1-208ENST00000480907 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
NUB1-208ENST00000480907 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
NUB1-208ENST00000480907 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
NUB1-208ENST00000480907 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
NUB1-208ENST00000480907 POTEEQ6S8J3 1075 aa13.05□□□□□ -0.32
NUB1-208ENST00000480907 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
NUB1-208ENST00000480907 MAP3K7O43318 606 aa13.04□□□□□ -0.32
NUB1-208ENST00000480907 C6orf132Q5T0Z8 1188 aa13.04□□□□□ -0.32
NUB1-208ENST00000480907 CDHR5Q9HBB8 845 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms