RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 MLECQ14165 292 aa21.96■■□□□ 1.11
PTPN7-212ENST00000480836 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
PTPN7-212ENST00000480836 POGZQ7Z3K3 1410 aa21.96■■□□□ 1.11
PTPN7-212ENST00000480836 ZFYVE16Q7Z3T8 1539 aa21.96■■□□□ 1.11
PTPN7-212ENST00000480836 EFCAB2Q5VUJ9 269 aa21.94■■□□□ 1.1
PTPN7-212ENST00000480836 AFAP1Q8N556 730 aa21.94■■□□□ 1.1
PTPN7-212ENST00000480836 LMTK3Q96Q04 1460 aa21.94■■□□□ 1.1
PTPN7-212ENST00000480836 TROQ12816 1431 aaPredicted RBP21.93■■□□□ 1.1
PTPN7-212ENST00000480836 MAGI2Q86UL8 1455 aa21.91■■□□□ 1.1
PTPN7-212ENST00000480836 HSPA2P54652 639 aa21.91■■□□□ 1.1
PTPN7-212ENST00000480836 CDK11AQ9UQ88 783 aaPredicted RBP21.91■■□□□ 1.1
PTPN7-212ENST00000480836 MYO5CQ9NQX4 1742 aa21.89■■□□□ 1.1
PTPN7-212ENST00000480836 PCF11O94913 1555 aaKnown RBP21.89■■□□□ 1.09
PTPN7-212ENST00000480836 ATP10AO60312 1499 aa21.87■■□□□ 1.09
PTPN7-212ENST00000480836 ARHGEF12Q9NZN5 1544 aa21.85■■□□□ 1.09
PTPN7-212ENST00000480836 CEBPAP49715 358 aaPredicted RBP21.85■■□□□ 1.09
PTPN7-212ENST00000480836 CASKIN1Q8WXD9 1431 aa21.85■■□□□ 1.09
PTPN7-212ENST00000480836 CDC42BPBQ9Y5S2 1711 aa21.85■■□□□ 1.09
PTPN7-212ENST00000480836 ARHGAP5Q13017 1502 aa21.84■■□□□ 1.09
PTPN7-212ENST00000480836 TRAPPC8Q9Y2L5 1435 aa21.81■■□□□ 1.08
PTPN7-212ENST00000480836 C9orf84Q5VXU9 1444 aa21.8■■□□□ 1.08
PTPN7-212ENST00000480836 KDM5CP41229 1560 aa21.8■■□□□ 1.08
PTPN7-212ENST00000480836 CLIP1P30622 1438 aa21.79■■□□□ 1.08
PTPN7-212ENST00000480836 ZNF518AQ6AHZ1 1483 aa21.77■■□□□ 1.08
PTPN7-212ENST00000480836 FER1L4A9Z1Z3 1794 aa21.77■■□□□ 1.08
PTPN7-212ENST00000480836 DIP2CQ9Y2E4 1556 aa21.75■■□□□ 1.07
PTPN7-212ENST00000480836 FBXO41Q8TF61 875 aa21.75■■□□□ 1.07
PTPN7-212ENST00000480836 PREX2Q70Z35 1606 aa21.73■■□□□ 1.07
PTPN7-212ENST00000480836 ABCA6Q8N139 1617 aa21.73■■□□□ 1.07
PTPN7-212ENST00000480836 CCDC18Q5T9S5 1454 aa21.72■■□□□ 1.07
PTPN7-212ENST00000480836 MLH3Q9UHC1 1453 aa21.72■■□□□ 1.07
PTPN7-212ENST00000480836 ABCC1P33527 1531 aa21.72■■□□□ 1.07
PTPN7-212ENST00000480836 MYT1LQ9UL68 1186 aa21.72■■□□□ 1.07
PTPN7-212ENST00000480836 CDC42BPAQ5VT25 1732 aa21.72■■□□□ 1.07
PTPN7-212ENST00000480836 ZNF777Q9ULD5 760 aaPredicted RBP21.69■■□□□ 1.06
PTPN7-212ENST00000480836 FYCO1Q9BQS8 1478 aa21.69■■□□□ 1.06
PTPN7-212ENST00000480836 GPATCH8Q9UKJ3 1502 aaKnown RBP21.69■■□□□ 1.06
PTPN7-212ENST00000480836 ITSN2Q9NZM3 1697 aa21.68■■□□□ 1.06
PTPN7-212ENST00000480836 KIDINS220Q9ULH0 1771 aa21.67■■□□□ 1.06
PTPN7-212ENST00000480836 HNRNPMP52272 730 aaKnown RBP eCLIP21.67■■□□□ 1.06
PTPN7-212ENST00000480836 SAMD9LQ8IVG5 1584 aa21.65■■□□□ 1.06
PTPN7-212ENST00000480836 REREQ9P2R6 1566 aa21.65■■□□□ 1.06
PTPN7-212ENST00000480836 AGLP35573 1532 aa21.61■■□□□ 1.05
PTPN7-212ENST00000480836 ZNF644Q9H582 1327 aaPredicted RBP21.6■■□□□ 1.05
PTPN7-212ENST00000480836 SYCP2Q9BX26 1530 aa21.6■■□□□ 1.05
PTPN7-212ENST00000480836 PREX1Q8TCU6 1659 aa21.6■■□□□ 1.05
PTPN7-212ENST00000480836 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
PTPN7-212ENST00000480836 C3P01024 1663 aa21.59■■□□□ 1.05
PTPN7-212ENST00000480836 CERKQ8TCT0 537 aa21.57■■□□□ 1.04
PTPN7-212ENST00000480836 CFDP1Q9UEE9 299 aaPredicted RBP21.56■■□□□ 1.04
PTPN7-212ENST00000480836 SPAG9O60271 1321 aaKnown RBP21.55■■□□□ 1.04
PTPN7-212ENST00000480836 SETD1BQ9UPS6 1966 aaKnown RBP21.52■■□□□ 1.04
PTPN7-212ENST00000480836 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.04
PTPN7-212ENST00000480836 UHRF1BP1Q6BDS2 1440 aa21.52■■□□□ 1.04
PTPN7-212ENST00000480836 KIAA1107Q9UPP5 1409 aa21.52■■□□□ 1.04
PTPN7-212ENST00000480836 MTUS2Q5JR59 1369 aa21.5■■□□□ 1.03
PTPN7-212ENST00000480836 SUPT6HQ7KZ85 1726 aaKnown RBP21.49■■□□□ 1.03
PTPN7-212ENST00000480836 MBD5Q9P267 1494 aa21.48■■□□□ 1.03
PTPN7-212ENST00000480836 ATP7AQ04656 1500 aa21.48■■□□□ 1.03
PTPN7-212ENST00000480836 TIAM1Q13009 1591 aa21.48■■□□□ 1.03
PTPN7-212ENST00000480836 ZMYM3Q14202 1370 aa21.48■■□□□ 1.03
PTPN7-212ENST00000480836 CEP162Q5TB80 1403 aa21.47■■□□□ 1.03
PTPN7-212ENST00000480836 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
PTPN7-212ENST00000480836 ESF1Q9H501 851 aaKnown RBP21.47■■□□□ 1.03
PTPN7-212ENST00000480836 INO80Q9ULG1 1556 aaPredicted RBP21.47■■□□□ 1.03
PTPN7-212ENST00000480836 A2MP01023 1474 aa21.45■■□□□ 1.02
PTPN7-212ENST00000480836 PLXNC1O60486 1568 aa21.44■■□□□ 1.02
PTPN7-212ENST00000480836 GGT6Q6P531 493 aa21.43■■□□□ 1.02
PTPN7-212ENST00000480836 CNTLNQ9NXG0 1405 aa21.43■■□□□ 1.02
PTPN7-212ENST00000480836 PLEKHH2Q8IVE3 1493 aa21.42■■□□□ 1.02
PTPN7-212ENST00000480836 DMRT2Q9Y5R5 561 aa21.41■■□□□ 1.02
PTPN7-212ENST00000480836 CLTCQ00610 1675 aaKnown RBP21.4■■□□□ 1.02
PTPN7-212ENST00000480836 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.02
PTPN7-212ENST00000480836 PTPRTO14522 1441 aa21.38■■□□□ 1.01
PTPN7-212ENST00000480836 PTPRKQ15262 1439 aa21.38■■□□□ 1.01
PTPN7-212ENST00000480836 NCOA1Q15788 1441 aa21.38■■□□□ 1.01
PTPN7-212ENST00000480836 MROH2AA6NES4 1674 aa21.37■■□□□ 1.01
PTPN7-212ENST00000480836 NCKAP5LQ9HCH0 1330 aa21.37■■□□□ 1.01
PTPN7-212ENST00000480836 NCOA2Q15596 1464 aa21.37■■□□□ 1.01
PTPN7-212ENST00000480836 NPATQ14207 1427 aa21.37■■□□□ 1.01
PTPN7-212ENST00000480836 LTBP4Q8N2S1 1624 aa21.36■■□□□ 1.01
PTPN7-212ENST00000480836 CAMSAP1Q5T5Y3 1602 aa21.34■■□□□ 1.01
PTPN7-212ENST00000480836 DHX29Q7Z478 1369 aaKnown RBP21.33■■□□□ 1
PTPN7-212ENST00000480836 RTEL1-TNFRSF6BF6WH68 1400 aa21.32■■□□□ 1
PTPN7-212ENST00000480836 KANK4Q5T7N3 995 aaPredicted RBP21.32■■□□□ 1
PTPN7-212ENST00000480836 ADGBQ8N7X0 1667 aa21.31■■□□□ 1
PTPN7-212ENST00000480836 FBXO31Q5XUX0 539 aaPredicted RBP21.31■■□□□ 1
PTPN7-212ENST00000480836 CAMSAP2Q08AD1 1489 aa21.3■■□□□ 1
PTPN7-212ENST00000480836 KIF3BO15066 747 aa21.29■■□□□ 1
PTPN7-212ENST00000480836 PPP6R1Q9UPN7 881 aa21.27■■□□□ 1
PTPN7-212ENST00000480836 MYO3AQ8NEV4 1616 aa21.26■□□□□ 0.99
PTPN7-212ENST00000480836 ZNF335Q9H4Z2 1342 aaPredicted RBP21.26■□□□□ 0.99
PTPN7-212ENST00000480836 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
PTPN7-212ENST00000480836 CEP170BQ9Y4F5 1589 aaPredicted RBP21.24■□□□□ 0.99
PTPN7-212ENST00000480836 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
PTPN7-212ENST00000480836 LRRC9Q6ZRR7 1453 aa21.24■□□□□ 0.99
PTPN7-212ENST00000480836 ZNF142P52746 1687 aaPredicted RBP21.22■□□□□ 0.99
PTPN7-212ENST00000480836 TCOF1Q13428 1488 aaKnown RBP21.22■□□□□ 0.99
PTPN7-212ENST00000480836 RSPH4AQ5TD94 716 aa21.21■□□□□ 0.99
PTPN7-212ENST00000480836 DNMT1P26358 1616 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms