RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 PLA2G2EQ9NZK7 142 aa8.05□□□□□ -1.12
R3HDM1-214ENST00000480793 SOX12O15370 315 aa8.03□□□□□ -1.12
R3HDM1-214ENST00000480793 TRIM41Q8WV44 630 aa8.02□□□□□ -1.13
R3HDM1-214ENST00000480793 PBX2P40425 430 aa8.01□□□□□ -1.13
R3HDM1-214ENST00000480793 KHSRPQ92945 711 aaKnown RBP eCLIP8□□□□□ -1.135e-6■□□□□ 8.2
R3HDM1-214ENST00000480793 HCSTQ9UBK5 93 aa8□□□□□ -1.13
R3HDM1-214ENST00000480793 IFNLR1Q8IU57 520 aaPredicted RBP7.98□□□□□ -1.13
R3HDM1-214ENST00000480793 MS4A4AQ96JQ5 239 aa7.97□□□□□ -1.13
R3HDM1-214ENST00000480793 PHF8Q9UPP1 1060 aa7.96□□□□□ -1.14
R3HDM1-214ENST00000480793 NUDT7P0C024 238 aa7.93□□□□□ -1.14
R3HDM1-214ENST00000480793 AXIN2Q9Y2T1 843 aa7.92□□□□□ -1.14
R3HDM1-214ENST00000480793 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.91□□□□□ -1.14
R3HDM1-214ENST00000480793 RIOK3O14730 519 aaKnown RBP7.91□□□□□ -1.14
R3HDM1-214ENST00000480793 ZFP91Q96JP5 570 aaPredicted RBP7.91□□□□□ -1.14
R3HDM1-214ENST00000480793 VGFO15240 615 aaPredicted RBP7.9□□□□□ -1.14
R3HDM1-214ENST00000480793 NLRP6P59044 892 aa7.9□□□□□ -1.14
R3HDM1-214ENST00000480793 LHX6Q9UPM6 363 aa7.9□□□□□ -1.14
R3HDM1-214ENST00000480793 ADGRD1Q6QNK2 874 aa7.89□□□□□ -1.15
R3HDM1-214ENST00000480793 POTEEQ6S8J3 1075 aa7.89□□□□□ -1.15
R3HDM1-214ENST00000480793 ARHGAP33O14559 1287 aa7.86□□□□□ -1.15
R3HDM1-214ENST00000480793 PCDHGA4Q9Y5G9 962 aa7.86□□□□□ -1.15
R3HDM1-214ENST00000480793 PSDA5PKW4 1024 aaPredicted RBP7.85□□□□□ -1.15
R3HDM1-214ENST00000480793 C2orf72A6NCS6 295 aa7.85□□□□□ -1.15
R3HDM1-214ENST00000480793 KIF3CO14782 793 aa7.84□□□□□ -1.15
R3HDM1-214ENST00000480793 SLC34A2O95436 690 aa7.84□□□□□ -1.15
R3HDM1-214ENST00000480793 TK2O00142 265 aa7.83□□□□□ -1.16
R3HDM1-214ENST00000480793 RNF25Q96BH1 459 aaPredicted RBP7.83□□□□□ -1.16
R3HDM1-214ENST00000480793 FBXO22Q8NEZ5 403 aa7.82□□□□□ -1.16
R3HDM1-214ENST00000480793 KCTD12Q96CX2 325 aaKnown RBP7.82□□□□□ -1.16
R3HDM1-214ENST00000480793 STAC3Q96MF2 364 aa7.82□□□□□ -1.16
R3HDM1-214ENST00000480793 TAOK2Q9UL54 1235 aa7.8□□□□□ -1.16
R3HDM1-214ENST00000480793 HRO43593 1189 aa7.79□□□□□ -1.16
R3HDM1-214ENST00000480793 RGS20O76081 388 aa7.79□□□□□ -1.16
R3HDM1-214ENST00000480793 TMC2Q8TDI7 906 aa7.79□□□□□ -1.16
R3HDM1-214ENST00000480793 IRX2Q9BZI1 471 aaPredicted RBP7.79□□□□□ -1.16
R3HDM1-214ENST00000480793 BCL11BQ9C0K0 894 aaPredicted RBP7.78□□□□□ -1.16
R3HDM1-214ENST00000480793 DMRTA1Q5VZB9 504 aa7.77□□□□□ -1.17
R3HDM1-214ENST00000480793 PSEN2P49810 448 aa7.76□□□□□ -1.17
R3HDM1-214ENST00000480793 MFRPQ9BY79 579 aa7.76□□□□□ -1.17
R3HDM1-214ENST00000480793 STK24Q9Y6E0 443 aa7.76□□□□□ -1.17
R3HDM1-214ENST00000480793 KCNH8Q96L42 1107 aa7.75□□□□□ -1.17
R3HDM1-214ENST00000480793 PPP4R3BQ5MIZ7 849 aa7.74□□□□□ -1.17
R3HDM1-214ENST00000480793 PTPN5P54829 565 aa7.72□□□□□ -1.17
R3HDM1-214ENST00000480793 IFFO2Q5TF58 517 aa7.72□□□□□ -1.17
R3HDM1-214ENST00000480793 STK25O00506 426 aa7.69□□□□□ -1.18
R3HDM1-214ENST00000480793 A0A0G2JS52 829 aa7.68□□□□□ -1.18
R3HDM1-214ENST00000480793 KDM4FA0A1W2PPD8 638 aa7.68□□□□□ -1.18
R3HDM1-214ENST00000480793 PTCD2Q8WV60 388 aaKnown RBP7.68□□□□□ -1.18
R3HDM1-214ENST00000480793 KCNK17Q96T54 332 aa7.68□□□□□ -1.18
R3HDM1-214ENST00000480793 TBC1D12O60347 775 aa7.66□□□□□ -1.18
R3HDM1-214ENST00000480793 GOLGA8CPA6NN73 597 aa7.64□□□□□ -1.19
R3HDM1-214ENST00000480793 VPS9D1Q9Y2B5 631 aa7.64□□□□□ -1.19
R3HDM1-214ENST00000480793 THSD4Q6ZMP0 1018 aa7.63□□□□□ -1.19
R3HDM1-214ENST00000480793 PLPP6Q8IY26 295 aa7.61□□□□□ -1.19
R3HDM1-214ENST00000480793 FOXK1P85037 733 aa7.6□□□□□ -1.19
R3HDM1-214ENST00000480793 Q6ZNB5 142 aa7.6□□□□□ -1.19
R3HDM1-214ENST00000480793 WNT2BQ93097 391 aa7.6□□□□□ -1.19
R3HDM1-214ENST00000480793 SLC4A5Q9BY07 1137 aa7.59□□□□□ -1.19
R3HDM1-214ENST00000480793 MRPL50Q8N5N7 158 aaKnown RBP7.58□□□□□ -1.2
R3HDM1-214ENST00000480793 PPP1R37O75864 691 aa7.57□□□□□ -1.2
R3HDM1-214ENST00000480793 ZNF454Q8N9F8 522 aa7.57□□□□□ -1.2
R3HDM1-214ENST00000480793 BCL2L12Q9HB09 334 aa7.56□□□□□ -1.2
R3HDM1-214ENST00000480793 BHMG1C9JSJ3 638 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-214ENST00000480793 PTPREP23469 700 aa7.55□□□□□ -1.2
R3HDM1-214ENST00000480793 NBPF3Q9H094 633 aa7.55□□□□□ -1.2
R3HDM1-214ENST00000480793 GPHNQ9NQX3 736 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-214ENST00000480793 ECM2O94769 699 aaPredicted RBP7.53□□□□□ -1.2
R3HDM1-214ENST00000480793 DSG2Q14126 1118 aa7.53□□□□□ -1.2
R3HDM1-214ENST00000480793 ZBED2Q9BTP6 218 aa7.52□□□□□ -1.21
R3HDM1-214ENST00000480793 ITGBL1O95965 494 aaPredicted RBP7.5□□□□□ -1.21
R3HDM1-214ENST00000480793 UPF1Q92900 1129 aaKnown RBP eCLIP7.5□□□□□ -1.21
R3HDM1-214ENST00000480793 OXER1Q8TDS5 423 aa7.49□□□□□ -1.21
R3HDM1-214ENST00000480793 FOSBP53539 338 aa7.48□□□□□ -1.21
R3HDM1-214ENST00000480793 LAPTM4AQ15012 233 aa7.48□□□□□ -1.21
R3HDM1-214ENST00000480793 ANKK1Q8NFD2 765 aa7.48□□□□□ -1.21
R3HDM1-214ENST00000480793 RGL2O15211 777 aa7.45□□□□□ -1.22
R3HDM1-214ENST00000480793 JPH4Q96JJ6 628 aa7.45□□□□□ -1.22
R3HDM1-214ENST00000480793 ZDHHC16Q969W1 377 aa7.44□□□□□ -1.22
R3HDM1-214ENST00000480793 NYAP1Q6ZVC0 841 aa7.43□□□□□ -1.22
R3HDM1-214ENST00000480793 KCNC4Q03721 635 aa7.42□□□□□ -1.22
R3HDM1-214ENST00000480793 TRAF7Q6Q0C0 670 aa7.42□□□□□ -1.22
R3HDM1-214ENST00000480793 ADAM33Q9BZ11 813 aa7.42□□□□□ -1.22
R3HDM1-214ENST00000480793 BCAMP50895 628 aa7.41□□□□□ -1.22
R3HDM1-214ENST00000480793 RABGEF1Q9UJ41 708 aa7.41□□□□□ -1.22
R3HDM1-214ENST00000480793 PPP1R3GB7ZBB8 358 aa7.4□□□□□ -1.22
R3HDM1-214ENST00000480793 SOWAHBA6NEL2 793 aa7.39□□□□□ -1.23
R3HDM1-214ENST00000480793 GFRA3O60609 400 aa7.39□□□□□ -1.23
R3HDM1-214ENST00000480793 PPP1R15BQ5SWA1 713 aa7.39□□□□□ -1.23
R3HDM1-214ENST00000480793 EVI5O60447 810 aa7.38□□□□□ -1.23
R3HDM1-214ENST00000480793 LAPTM4BQ86VI4 370 aa7.38□□□□□ -1.23
R3HDM1-214ENST00000480793 ANO8Q9HCE9 1232 aaPredicted RBP7.38□□□□□ -1.23
R3HDM1-214ENST00000480793 PROX2Q3B8N5 592 aa7.36□□□□□ -1.23
R3HDM1-214ENST00000480793 LCE2BO14633 110 aa7.35□□□□□ -1.23
R3HDM1-214ENST00000480793 ZFRQ96KR1 1074 aaKnown RBP7.35□□□□□ -1.23
R3HDM1-214ENST00000480793 CRISPLD2Q9H0B8 497 aa7.35□□□□□ -1.23
R3HDM1-214ENST00000480793 WBP1LQ9NX94 342 aa7.35□□□□□ -1.23
R3HDM1-214ENST00000480793 PKD2Q13563 968 aa7.34□□□□□ -1.23
R3HDM1-214ENST00000480793 NRG2O14511 850 aaPredicted RBP7.33□□□□□ -1.24
R3HDM1-214ENST00000480793 HS6ST3Q8IZP7 471 aa7.32□□□□□ -1.24
R3HDM1-214ENST00000480793 COL9A1P20849 921 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms