RNA–Protein interactions for RNA: ENST00000480704.1

PLOD2-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, humanhuman

TSL 4

Gene PLOD2, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD2-208ENST00000480704 EFCAB2Q5VUJ9 269 aa24.63■■□□□ 1.53
PLOD2-208ENST00000480704 PREX2Q70Z35 1606 aa24.63■■□□□ 1.53
PLOD2-208ENST00000480704 SCAPERQ9BY12 1400 aa24.62■■□□□ 1.53
PLOD2-208ENST00000480704 LOC105371045A0A1W2PR82 267 aa24.62■■□□□ 1.53
PLOD2-208ENST00000480704 MAGI2Q86UL8 1455 aa24.6■■□□□ 1.53
PLOD2-208ENST00000480704 ARHGAP5Q13017 1502 aa24.6■■□□□ 1.53
PLOD2-208ENST00000480704 CDC42BPAQ5VT25 1732 aa24.59■■□□□ 1.53
PLOD2-208ENST00000480704 ZFYVE16Q7Z3T8 1539 aa24.55■■□□□ 1.52
PLOD2-208ENST00000480704 KDM5CP41229 1560 aa24.54■■□□□ 1.52
PLOD2-208ENST00000480704 YEATS2Q9ULM3 1422 aa24.54■■□□□ 1.52
PLOD2-208ENST00000480704 ADAMTSL3P82987 1691 aa24.54■■□□□ 1.52
PLOD2-208ENST00000480704 ABCC1P33527 1531 aa24.53■■□□□ 1.52
PLOD2-208ENST00000480704 GPATCH8Q9UKJ3 1502 aaKnown RBP24.52■■□□□ 1.52
PLOD2-208ENST00000480704 ZNF518AQ6AHZ1 1483 aa24.51■■□□□ 1.51
PLOD2-208ENST00000480704 ARHGEF12Q9NZN5 1544 aa24.51■■□□□ 1.51
PLOD2-208ENST00000480704 BCORL1Q5H9F3 1711 aa24.51■■□□□ 1.51
PLOD2-208ENST00000480704 SIGLEC1Q9BZZ2 1709 aa24.51■■□□□ 1.51
PLOD2-208ENST00000480704 VPS8Q8N3P4 1428 aa24.5■■□□□ 1.51
PLOD2-208ENST00000480704 EHBP1L1Q8N3D4 1523 aa24.5■■□□□ 1.51
PLOD2-208ENST00000480704 MTUS2Q5JR59 1369 aa24.48■■□□□ 1.51
PLOD2-208ENST00000480704 ITSN2Q9NZM3 1697 aa24.48■■□□□ 1.51
PLOD2-208ENST00000480704 SAMD9LQ8IVG5 1584 aa24.46■■□□□ 1.51
PLOD2-208ENST00000480704 TRAPPC8Q9Y2L5 1435 aa24.44■■□□□ 1.5
PLOD2-208ENST00000480704 AFAP1Q8N556 730 aa24.44■■□□□ 1.5
PLOD2-208ENST00000480704 MLH3Q9UHC1 1453 aa24.44■■□□□ 1.5
PLOD2-208ENST00000480704 TIAM1Q13009 1591 aa24.43■■□□□ 1.5
PLOD2-208ENST00000480704 HECW2Q9P2P5 1572 aa24.43■■□□□ 1.5
PLOD2-208ENST00000480704 ATP10AO60312 1499 aa24.42■■□□□ 1.5
PLOD2-208ENST00000480704 MADDQ8WXG6 1647 aa24.4■■□□□ 1.5
PLOD2-208ENST00000480704 C9orf84Q5VXU9 1444 aa24.4■■□□□ 1.5
PLOD2-208ENST00000480704 CCNB3Q8WWL7 1395 aa24.4■■□□□ 1.5
PLOD2-208ENST00000480704 REREQ9P2R6 1566 aa24.39■■□□□ 1.5
PLOD2-208ENST00000480704 DIP2CQ9Y2E4 1556 aa24.39■■□□□ 1.5
PLOD2-208ENST00000480704 KIAA1107Q9UPP5 1409 aa24.39■■□□□ 1.5
PLOD2-208ENST00000480704 PTPRMP28827 1452 aa24.38■■□□□ 1.49
PLOD2-208ENST00000480704 MAP3K1Q13233 1512 aa24.38■■□□□ 1.49
PLOD2-208ENST00000480704 SYCP2Q9BX26 1530 aa24.37■■□□□ 1.49
PLOD2-208ENST00000480704 ARID4BQ4LE39 1312 aaPredicted RBP24.36■■□□□ 1.49
PLOD2-208ENST00000480704 ABCA6Q8N139 1617 aa24.36■■□□□ 1.49
PLOD2-208ENST00000480704 KIDINS220Q9ULH0 1771 aa24.36■■□□□ 1.49
PLOD2-208ENST00000480704 PLEKHH2Q8IVE3 1493 aa24.35■■□□□ 1.49
PLOD2-208ENST00000480704 SUPT6HQ7KZ85 1726 aaKnown RBP24.35■■□□□ 1.49
PLOD2-208ENST00000480704 NCOA2Q15596 1464 aa24.34■■□□□ 1.49
PLOD2-208ENST00000480704 CFDP1Q9UEE9 299 aaPredicted RBP24.34■■□□□ 1.49
PLOD2-208ENST00000480704 LRRC9Q6ZRR7 1453 aa24.32■■□□□ 1.48
PLOD2-208ENST00000480704 ZNF777Q9ULD5 760 aaPredicted RBP24.3■■□□□ 1.48
PLOD2-208ENST00000480704 RIMS1Q86UR5 1692 aaKnown RBP24.3■■□□□ 1.48
PLOD2-208ENST00000480704 MBD5Q9P267 1494 aa24.29■■□□□ 1.48
PLOD2-208ENST00000480704 AGLP35573 1532 aa24.29■■□□□ 1.48
PLOD2-208ENST00000480704 HNRNPMP52272 730 aaKnown RBP eCLIP24.27■■□□□ 1.483e-7■□□□□ 10.2
PLOD2-208ENST00000480704 INO80Q9ULG1 1556 aaPredicted RBP24.27■■□□□ 1.48
PLOD2-208ENST00000480704 FER1L4A9Z1Z3 1794 aa24.25■■□□□ 1.47
PLOD2-208ENST00000480704 ZNF644Q9H582 1327 aaPredicted RBP24.25■■□□□ 1.47
PLOD2-208ENST00000480704 ATP7AQ04656 1500 aa24.23■■□□□ 1.47
PLOD2-208ENST00000480704 KANK4Q5T7N3 995 aaPredicted RBP24.22■■□□□ 1.47
PLOD2-208ENST00000480704 SPAG9O60271 1321 aaKnown RBP24.21■■□□□ 1.47
PLOD2-208ENST00000480704 PLXNC1O60486 1568 aa24.19■■□□□ 1.46
PLOD2-208ENST00000480704 CAMSAP2Q08AD1 1489 aa24.19■■□□□ 1.46
PLOD2-208ENST00000480704 MLECQ14165 292 aa24.18■■□□□ 1.46
PLOD2-208ENST00000480704 MYT1LQ9UL68 1186 aa24.17■■□□□ 1.46
PLOD2-208ENST00000480704 RTEL1-TNFRSF6BF6WH68 1400 aa24.16■■□□□ 1.46
PLOD2-208ENST00000480704 ARHGEF5Q12774 1597 aa24.14■■□□□ 1.45
PLOD2-208ENST00000480704 CCDC141Q6ZP82 1450 aa24.13■■□□□ 1.45
PLOD2-208ENST00000480704 LMTK3Q96Q04 1460 aa24.13■■□□□ 1.45
PLOD2-208ENST00000480704 A2MP01023 1474 aa24.12■■□□□ 1.45
PLOD2-208ENST00000480704 ADGBQ8N7X0 1667 aa24.11■■□□□ 1.45
PLOD2-208ENST00000480704 MYOM3Q5VTT5 1437 aa24.11■■□□□ 1.45
PLOD2-208ENST00000480704 MIA2Q96PC5 1412 aa24.11■■□□□ 1.45
PLOD2-208ENST00000480704 RSPH4AQ5TD94 716 aa24.09■■□□□ 1.45
PLOD2-208ENST00000480704 C3P01024 1663 aa24.04■■□□□ 1.44
PLOD2-208ENST00000480704 MAST1Q9Y2H9 1570 aa24.03■■□□□ 1.44
PLOD2-208ENST00000480704 CNTLNQ9NXG0 1405 aa24.03■■□□□ 1.44
PLOD2-208ENST00000480704 DHX29Q7Z478 1369 aaKnown RBP24.02■■□□□ 1.44
PLOD2-208ENST00000480704 MROH2AA6NES4 1674 aa24.02■■□□□ 1.44
PLOD2-208ENST00000480704 CEBPAP49715 358 aaPredicted RBP24.01■■□□□ 1.43
PLOD2-208ENST00000480704 APLP2Q06481 763 aa24■■□□□ 1.43
PLOD2-208ENST00000480704 SETD1BQ9UPS6 1966 aaKnown RBP24■■□□□ 1.43
PLOD2-208ENST00000480704 PREX1Q8TCU6 1659 aa23.99■■□□□ 1.43
PLOD2-208ENST00000480704 PTPN23Q9H3S7 1636 aa23.96■■□□□ 1.43
PLOD2-208ENST00000480704 TCOF1Q13428 1488 aaKnown RBP23.96■■□□□ 1.43
PLOD2-208ENST00000480704 SENP3Q9H4L4 574 aaPredicted RBP23.96■■□□□ 1.43
PLOD2-208ENST00000480704 PLPPR3Q6T4P5 718 aa23.95■■□□□ 1.42
PLOD2-208ENST00000480704 FGD6Q6ZV73 1430 aa23.94■■□□□ 1.42
PLOD2-208ENST00000480704 PPP6R1Q9UPN7 881 aa23.94■■□□□ 1.42
PLOD2-208ENST00000480704 CLTCQ00610 1675 aaKnown RBP23.93■■□□□ 1.42
PLOD2-208ENST00000480704 TSPY4P0CV99 314 aa23.93■■□□□ 1.42
PLOD2-208ENST00000480704 TSPY10P0CW01 314 aa23.93■■□□□ 1.42
PLOD2-208ENST00000480704 ZMYM3Q14202 1370 aa23.91■■□□□ 1.42
PLOD2-208ENST00000480704 SHANK2Q9UPX8 1470 aa23.91■■□□□ 1.42
PLOD2-208ENST00000480704 CROCC2H7BZ55 1655 aa23.91■■□□□ 1.42
PLOD2-208ENST00000480704 NPATQ14207 1427 aa23.91■■□□□ 1.42
PLOD2-208ENST00000480704 FAM135AQ9P2D6 1515 aa23.9■■□□□ 1.42
PLOD2-208ENST00000480704 ESF1Q9H501 851 aaKnown RBP23.9■■□□□ 1.42
PLOD2-208ENST00000480704 ABCC5O15440 1437 aa23.9■■□□□ 1.42
PLOD2-208ENST00000480704 HSPA2P54652 639 aa23.89■■□□□ 1.41
PLOD2-208ENST00000480704 DNMT1P26358 1616 aaKnown RBP23.88■■□□□ 1.41
PLOD2-208ENST00000480704 GGT6Q6P531 493 aa23.88■■□□□ 1.41
PLOD2-208ENST00000480704 UHRF1BP1Q6BDS2 1440 aa23.87■■□□□ 1.41
PLOD2-208ENST00000480704 RNF17Q9BXT8 1623 aaKnown RBP23.86■■□□□ 1.41
PLOD2-208ENST00000480704 EIF2AK4Q9P2K8 1649 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms