RNA–Protein interactions for RNA: ENST00000480704.1

PLOD2-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, humanhuman

TSL 4

Gene PLOD2, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD2-208ENST00000480704 NISCHQ9Y2I1 1504 aa37.88■■■■□ 3.65
PLOD2-208ENST00000480704 CCDC180Q9P1Z9 1646 aa33.82■■■■□ 3
PLOD2-208ENST00000480704 ABCC9O60706 1549 aa33.23■■■□□ 2.91
PLOD2-208ENST00000480704 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
PLOD2-208ENST00000480704 NACADO15069 1562 aa31.84■■■□□ 2.69
PLOD2-208ENST00000480704 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
PLOD2-208ENST00000480704 ZCCHC6Q5VYS8 1495 aaKnown RBP31.52■■■□□ 2.64
PLOD2-208ENST00000480704 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
PLOD2-208ENST00000480704 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.62
PLOD2-208ENST00000480704 UNC13AQ9UPW8 1703 aa31.24■■■□□ 2.59
PLOD2-208ENST00000480704 BICRAQ9NZM4 1560 aa31.04■■■□□ 2.56
PLOD2-208ENST00000480704 PABPN1Q86U42 306 aaKnown RBP eCLIP30.97■■■□□ 2.55
PLOD2-208ENST00000480704 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
PLOD2-208ENST00000480704 SCRIBQ14160 1630 aa30.74■■■□□ 2.51
PLOD2-208ENST00000480704 SHROOM4Q9ULL8 1493 aa30.69■■■□□ 2.5
PLOD2-208ENST00000480704 EIF4G1Q04637 1599 aaKnown RBP30.18■■■□□ 2.42
PLOD2-208ENST00000480704 CC2D2AQ9P2K1 1620 aa30.11■■■□□ 2.41
PLOD2-208ENST00000480704 CECR2Q9BXF3 1484 aa29.92■■■□□ 2.38
PLOD2-208ENST00000480704 SMARCA4P51532 1647 aa29.45■■■□□ 2.3
PLOD2-208ENST00000480704 NCAPD3P42695 1498 aa29.4■■■□□ 2.3
PLOD2-208ENST00000480704 BAZ1AQ9NRL2 1556 aaPredicted RBP29.36■■■□□ 2.29
PLOD2-208ENST00000480704 ATAD2BQ9ULI0 1458 aa29.36■■■□□ 2.29
PLOD2-208ENST00000480704 SMARCA2P51531 1590 aa29.29■■■□□ 2.28
PLOD2-208ENST00000480704 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
PLOD2-208ENST00000480704 PEG3Q9GZU2 1588 aa29.23■■■□□ 2.27
PLOD2-208ENST00000480704 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
PLOD2-208ENST00000480704 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
PLOD2-208ENST00000480704 WIZO95785 1651 aa28.83■■■□□ 2.21
PLOD2-208ENST00000480704 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
PLOD2-208ENST00000480704 NESP48681 1621 aa28.72■■■□□ 2.19
PLOD2-208ENST00000480704 LAMC3Q9Y6N6 1575 aa28.63■■■□□ 2.17
PLOD2-208ENST00000480704 ERCC6Q03468 1493 aa28.62■■■□□ 2.17
PLOD2-208ENST00000480704 TOP2AP11388 1531 aaKnown RBP28.53■■■□□ 2.16
PLOD2-208ENST00000480704 CUX2O14529 1486 aa28.53■■■□□ 2.16
PLOD2-208ENST00000480704 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
PLOD2-208ENST00000480704 PDS5BQ9NTI5 1447 aa28.41■■■□□ 2.14
PLOD2-208ENST00000480704 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
PLOD2-208ENST00000480704 KIF21AQ7Z4S6 1674 aa28.38■■■□□ 2.13
PLOD2-208ENST00000480704 CFTRP13569 1480 aa28.3■■■□□ 2.12
PLOD2-208ENST00000480704 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
PLOD2-208ENST00000480704 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
PLOD2-208ENST00000480704 FANCD2Q9BXW9 1451 aa28.14■■■□□ 2.09
PLOD2-208ENST00000480704 WDR62O43379 1518 aa28.13■■■□□ 2.09
PLOD2-208ENST00000480704 CEP164Q9UPV0 1460 aa28.12■■■□□ 2.09
PLOD2-208ENST00000480704 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
PLOD2-208ENST00000480704 AEBP2Q6ZN18 517 aaPredicted RBP28.02■■■□□ 2.08
PLOD2-208ENST00000480704 DNAJC5Q9H3Z4 198 aa27.93■■■□□ 2.06
PLOD2-208ENST00000480704 URB2Q14146 1524 aaKnown RBP27.92■■■□□ 2.06
PLOD2-208ENST00000480704 TOPBP1Q92547 1522 aa27.68■■■□□ 2.02
PLOD2-208ENST00000480704 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
PLOD2-208ENST00000480704 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.02
PLOD2-208ENST00000480704 DNMBPQ6XZF7 1577 aa27.63■■■□□ 2.01
PLOD2-208ENST00000480704 IFT140Q96RY7 1462 aa27.57■■■□□ 2
PLOD2-208ENST00000480704 ZNF608Q9ULD9 1512 aaPredicted RBP27.47■■□□□ 1.99
PLOD2-208ENST00000480704 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.98
PLOD2-208ENST00000480704 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
PLOD2-208ENST00000480704 CUX1P39880 1505 aa27.4■■□□□ 1.98
PLOD2-208ENST00000480704 EIF4G3O43432 1585 aaKnown RBP27.35■■□□□ 1.97
PLOD2-208ENST00000480704 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
PLOD2-208ENST00000480704 RAD54L2Q9Y4B4 1467 aa27.29■■□□□ 1.96
PLOD2-208ENST00000480704 SOGA1O94964 1423 aa27.26■■□□□ 1.95
PLOD2-208ENST00000480704 AQRO60306 1485 aaKnown RBP eCLIP27.25■■□□□ 1.955e-10■■■□□ 15.5
PLOD2-208ENST00000480704 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
PLOD2-208ENST00000480704 OSCARQ8IYS5 282 aa27.2■■□□□ 1.94
PLOD2-208ENST00000480704 TDRD9Q8NDG6 1382 aaKnown RBP27.13■■□□□ 1.93
PLOD2-208ENST00000480704 BIVM-ERCC5R4GMW8 1640 aa27.1■■□□□ 1.93
PLOD2-208ENST00000480704 TOP2BQ02880 1626 aa27.09■■□□□ 1.93
PLOD2-208ENST00000480704 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
PLOD2-208ENST00000480704 ABCA10Q8WWZ4 1543 aa27.07■■□□□ 1.92
PLOD2-208ENST00000480704 SYNJ1O43426 1573 aa27.06■■□□□ 1.92
PLOD2-208ENST00000480704 CHD1O14646 1710 aa27.04■■□□□ 1.92
PLOD2-208ENST00000480704 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.91
PLOD2-208ENST00000480704 GRIN2BQ13224 1484 aa27■■□□□ 1.91
PLOD2-208ENST00000480704 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
PLOD2-208ENST00000480704 MAGI1Q96QZ7 1491 aaPredicted RBP26.99■■□□□ 1.91
PLOD2-208ENST00000480704 GAPVD1Q14C86 1478 aa26.96■■□□□ 1.91
PLOD2-208ENST00000480704 PBRM1Q86U86 1689 aa26.94■■□□□ 1.9
PLOD2-208ENST00000480704 SYNJ2O15056 1496 aa26.87■■□□□ 1.89
PLOD2-208ENST00000480704 RIMBP3CA6NJZ7 1639 aa26.87■■□□□ 1.89
PLOD2-208ENST00000480704 RIMBP3BA6NNM3 1639 aa26.87■■□□□ 1.89
PLOD2-208ENST00000480704 RIMBP3Q9UFD9 1639 aa26.87■■□□□ 1.89
PLOD2-208ENST00000480704 ARHGEF11O15085 1522 aa26.84■■□□□ 1.89
PLOD2-208ENST00000480704 FBLN2P98095 1184 aa26.83■■□□□ 1.89
PLOD2-208ENST00000480704 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
PLOD2-208ENST00000480704 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
PLOD2-208ENST00000480704 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
PLOD2-208ENST00000480704 TRIM41Q8WV44 630 aa26.74■■□□□ 1.87
PLOD2-208ENST00000480704 ERICH3Q5RHP9 1530 aa26.73■■□□□ 1.87
PLOD2-208ENST00000480704 GRIN2AQ12879 1464 aa26.67■■□□□ 1.86
PLOD2-208ENST00000480704 FHAD1B1AJZ9 1412 aa26.65■■□□□ 1.86
PLOD2-208ENST00000480704 ARAP1Q96P48 1450 aa26.62■■□□□ 1.85
PLOD2-208ENST00000480704 NUP160Q12769 1436 aa26.61■■□□□ 1.85
PLOD2-208ENST00000480704 CEP170Q5SW79 1584 aa26.57■■□□□ 1.84
PLOD2-208ENST00000480704 KIF27Q86VH2 1401 aa26.51■■□□□ 1.83
PLOD2-208ENST00000480704 CYB5RLQ6IPT4 315 aa26.5■■□□□ 1.83
PLOD2-208ENST00000480704 IGF1RP08069 1367 aa26.48■■□□□ 1.83
PLOD2-208ENST00000480704 SHROOM2Q13796 1616 aa26.46■■□□□ 1.83
PLOD2-208ENST00000480704 CUL7Q14999 1698 aa26.42■■□□□ 1.82
PLOD2-208ENST00000480704 ERCC6L2Q5T890 1561 aa26.38■■□□□ 1.81
PLOD2-208ENST00000480704 RUSC2Q8N2Y8 1516 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms