RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 MYO5CQ9NQX4 1742 aa30.82■■■□□ 2.52
ABCF3-214ENST00000480562 EFCAB2Q5VUJ9 269 aa30.82■■■□□ 2.52
ABCF3-214ENST00000480562 POGZQ7Z3K3 1410 aa30.81■■■□□ 2.52
ABCF3-214ENST00000480562 MAGI2Q86UL8 1455 aa30.78■■■□□ 2.52
ABCF3-214ENST00000480562 ILDR1Q86SU0 546 aaPredicted RBP30.78■■■□□ 2.52
ABCF3-214ENST00000480562 CLIP1P30622 1438 aa30.78■■■□□ 2.52
ABCF3-214ENST00000480562 SIGLEC1Q9BZZ2 1709 aa30.76■■■□□ 2.51
ABCF3-214ENST00000480562 PCF11O94913 1555 aaKnown RBP30.75■■■□□ 2.51
ABCF3-214ENST00000480562 CASKIN1Q8WXD9 1431 aa30.75■■■□□ 2.51
ABCF3-214ENST00000480562 RIMS1Q86UR5 1692 aaKnown RBP30.74■■■□□ 2.51
ABCF3-214ENST00000480562 ARHGAP5Q13017 1502 aa30.73■■■□□ 2.51
ABCF3-214ENST00000480562 MLECQ14165 292 aa30.7■■■□□ 2.51
ABCF3-214ENST00000480562 PLPPR3Q6T4P5 718 aa30.69■■■□□ 2.5
ABCF3-214ENST00000480562 CCDC18Q5T9S5 1454 aa30.69■■■□□ 2.5
ABCF3-214ENST00000480562 ATP10AO60312 1499 aa30.65■■■□□ 2.5
ABCF3-214ENST00000480562 AFAP1Q8N556 730 aa30.65■■■□□ 2.5
ABCF3-214ENST00000480562 ZNF518AQ6AHZ1 1483 aa30.63■■■□□ 2.49
ABCF3-214ENST00000480562 CDC42BPBQ9Y5S2 1711 aa30.62■■■□□ 2.49
ABCF3-214ENST00000480562 C9orf84Q5VXU9 1444 aa30.62■■■□□ 2.49
ABCF3-214ENST00000480562 LMTK3Q96Q04 1460 aa30.61■■■□□ 2.49
ABCF3-214ENST00000480562 FYCO1Q9BQS8 1478 aa30.61■■■□□ 2.49
ABCF3-214ENST00000480562 MYT1LQ9UL68 1186 aa30.58■■■□□ 2.49
ABCF3-214ENST00000480562 PREX2Q70Z35 1606 aa30.58■■■□□ 2.49
ABCF3-214ENST00000480562 KDM5CP41229 1560 aa30.58■■■□□ 2.49
ABCF3-214ENST00000480562 FER1L4A9Z1Z3 1794 aa30.56■■■□□ 2.48
ABCF3-214ENST00000480562 ARHGEF12Q9NZN5 1544 aa30.52■■■□□ 2.48
ABCF3-214ENST00000480562 TRAPPC8Q9Y2L5 1435 aa30.52■■■□□ 2.48
ABCF3-214ENST00000480562 ABCC1P33527 1531 aa30.52■■■□□ 2.48
ABCF3-214ENST00000480562 HSPA2P54652 639 aa30.51■■■□□ 2.47
ABCF3-214ENST00000480562 CDC42BPAQ5VT25 1732 aa30.5■■■□□ 2.47
ABCF3-214ENST00000480562 DIP2CQ9Y2E4 1556 aa30.49■■■□□ 2.47
ABCF3-214ENST00000480562 MLH3Q9UHC1 1453 aa30.47■■■□□ 2.47
ABCF3-214ENST00000480562 ITSN2Q9NZM3 1697 aa30.46■■■□□ 2.47
ABCF3-214ENST00000480562 ZNF777Q9ULD5 760 aaPredicted RBP30.46■■■□□ 2.47
ABCF3-214ENST00000480562 ABCA6Q8N139 1617 aa30.45■■■□□ 2.47
ABCF3-214ENST00000480562 CEBPAP49715 358 aaPredicted RBP30.43■■■□□ 2.46
ABCF3-214ENST00000480562 GPATCH8Q9UKJ3 1502 aaKnown RBP30.42■■■□□ 2.46
ABCF3-214ENST00000480562 REREQ9P2R6 1566 aa30.4■■■□□ 2.46
ABCF3-214ENST00000480562 SAMD9LQ8IVG5 1584 aa30.37■■■□□ 2.45
ABCF3-214ENST00000480562 KIDINS220Q9ULH0 1771 aa30.36■■■□□ 2.45
ABCF3-214ENST00000480562 SYCP2Q9BX26 1530 aa30.34■■■□□ 2.45
ABCF3-214ENST00000480562 MTUS2Q5JR59 1369 aa30.34■■■□□ 2.45
ABCF3-214ENST00000480562 HNRNPMP52272 730 aaKnown RBP eCLIP30.34■■■□□ 2.45
ABCF3-214ENST00000480562 AGLP35573 1532 aa30.32■■■□□ 2.44
ABCF3-214ENST00000480562 CCNB3Q8WWL7 1395 aa30.32■■■□□ 2.44
ABCF3-214ENST00000480562 CFDP1Q9UEE9 299 aaPredicted RBP30.32■■■□□ 2.44
ABCF3-214ENST00000480562 FBXO41Q8TF61 875 aa30.31■■■□□ 2.44
ABCF3-214ENST00000480562 CEP162Q5TB80 1403 aa30.3■■■□□ 2.44
ABCF3-214ENST00000480562 SPAG9O60271 1321 aaKnown RBP30.28■■■□□ 2.44
ABCF3-214ENST00000480562 PREX1Q8TCU6 1659 aa30.28■■■□□ 2.44
ABCF3-214ENST00000480562 ESF1Q9H501 851 aaKnown RBP30.26■■■□□ 2.43
ABCF3-214ENST00000480562 KIAA1107Q9UPP5 1409 aa30.25■■■□□ 2.43
ABCF3-214ENST00000480562 PLEKHH2Q8IVE3 1493 aa30.24■■■□□ 2.43
ABCF3-214ENST00000480562 C3P01024 1663 aa30.22■■■□□ 2.43
ABCF3-214ENST00000480562 EHBP1L1Q8N3D4 1523 aa30.21■■■□□ 2.43
ABCF3-214ENST00000480562 UHRF1BP1Q6BDS2 1440 aa30.2■■■□□ 2.42
ABCF3-214ENST00000480562 ZNF644Q9H582 1327 aaPredicted RBP30.2■■■□□ 2.42
ABCF3-214ENST00000480562 TIAM1Q13009 1591 aa30.2■■■□□ 2.42
ABCF3-214ENST00000480562 ATP7AQ04656 1500 aa30.19■■■□□ 2.42
ABCF3-214ENST00000480562 SETD1BQ9UPS6 1966 aaKnown RBP30.17■■■□□ 2.42
ABCF3-214ENST00000480562 INO80Q9ULG1 1556 aaPredicted RBP30.15■■■□□ 2.42
ABCF3-214ENST00000480562 SUPT6HQ7KZ85 1726 aaKnown RBP30.15■■■□□ 2.42
ABCF3-214ENST00000480562 CNTLNQ9NXG0 1405 aa30.14■■■□□ 2.42
ABCF3-214ENST00000480562 LOC105371045A0A1W2PR82 267 aa30.12■■■□□ 2.41
ABCF3-214ENST00000480562 A2MP01023 1474 aa30.12■■■□□ 2.41
ABCF3-214ENST00000480562 PLXNC1O60486 1568 aa30.09■■■□□ 2.41
ABCF3-214ENST00000480562 STRCQ7RTU9 1775 aa30.09■■■□□ 2.41
ABCF3-214ENST00000480562 MBD5Q9P267 1494 aa30.08■■■□□ 2.41
ABCF3-214ENST00000480562 CERKQ8TCT0 537 aa30.07■■■□□ 2.4
ABCF3-214ENST00000480562 NCOA2Q15596 1464 aa30.06■■■□□ 2.4
ABCF3-214ENST00000480562 ZMYM3Q14202 1370 aa30.05■■■□□ 2.4
ABCF3-214ENST00000480562 GGT6Q6P531 493 aa30.04■■■□□ 2.4
ABCF3-214ENST00000480562 DMRT2Q9Y5R5 561 aa30.04■■■□□ 2.4
ABCF3-214ENST00000480562 MROH2AA6NES4 1674 aa30.03■■■□□ 2.4
ABCF3-214ENST00000480562 CLTCQ00610 1675 aaKnown RBP30.01■■■□□ 2.39
ABCF3-214ENST00000480562 ADGBQ8N7X0 1667 aa30.01■■■□□ 2.39
ABCF3-214ENST00000480562 NPATQ14207 1427 aa29.99■■■□□ 2.39
ABCF3-214ENST00000480562 RTEL1-TNFRSF6BF6WH68 1400 aa29.97■■■□□ 2.39
ABCF3-214ENST00000480562 VPS8Q8N3P4 1428 aa29.97■■■□□ 2.39
ABCF3-214ENST00000480562 CAMSAP2Q08AD1 1489 aa29.97■■■□□ 2.39
ABCF3-214ENST00000480562 CCDC141Q6ZP82 1450 aa29.94■■■□□ 2.38
ABCF3-214ENST00000480562 DHX29Q7Z478 1369 aaKnown RBP29.92■■■□□ 2.38
ABCF3-214ENST00000480562 PTPRTO14522 1441 aa29.92■■■□□ 2.38
ABCF3-214ENST00000480562 NCOA1Q15788 1441 aa29.91■■■□□ 2.38
ABCF3-214ENST00000480562 LRRC9Q6ZRR7 1453 aa29.91■■■□□ 2.38
ABCF3-214ENST00000480562 PTPRKQ15262 1439 aa29.9■■■□□ 2.38
ABCF3-214ENST00000480562 PPP6R1Q9UPN7 881 aa29.9■■■□□ 2.38
ABCF3-214ENST00000480562 CAMSAP1Q5T5Y3 1602 aa29.88■■■□□ 2.37
ABCF3-214ENST00000480562 RSPH4AQ5TD94 716 aa29.87■■■□□ 2.37
ABCF3-214ENST00000480562 KIF3BO15066 747 aa29.86■■■□□ 2.37
ABCF3-214ENST00000480562 KANK4Q5T7N3 995 aaPredicted RBP29.86■■■□□ 2.37
ABCF3-214ENST00000480562 MYO3AQ8NEV4 1616 aa29.84■■■□□ 2.37
ABCF3-214ENST00000480562 ARHGEF5Q12774 1597 aa29.82■■■□□ 2.36
ABCF3-214ENST00000480562 NCKAP5LQ9HCH0 1330 aa29.82■■■□□ 2.36
ABCF3-214ENST00000480562 TSPY4P0CV99 314 aa29.81■■■□□ 2.36
ABCF3-214ENST00000480562 TSPY10P0CW01 314 aa29.81■■■□□ 2.36
ABCF3-214ENST00000480562 CEP170BQ9Y4F5 1589 aaPredicted RBP29.79■■■□□ 2.36
ABCF3-214ENST00000480562 ZNF142P52746 1687 aaPredicted RBP29.79■■■□□ 2.36
ABCF3-214ENST00000480562 MAP3K1Q13233 1512 aa29.78■■■□□ 2.36
ABCF3-214ENST00000480562 LTBP4Q8N2S1 1624 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms