RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 ARHGEF40Q8TER5 1519 aa24.55■■□□□ 1.52
CDK9-203ENST00000480353 MYT1LQ9UL68 1186 aa24.53■■□□□ 1.52
CDK9-203ENST00000480353 ZFYVE16Q7Z3T8 1539 aa24.52■■□□□ 1.52
CDK9-203ENST00000480353 POGZQ7Z3K3 1410 aa24.52■■□□□ 1.52
CDK9-203ENST00000480353 ZMYM4Q5VZL5 1548 aa24.51■■□□□ 1.51
CDK9-203ENST00000480353 CDC42BPBQ9Y5S2 1711 aa24.51■■□□□ 1.51
CDK9-203ENST00000480353 PREX2Q70Z35 1606 aa24.5■■□□□ 1.51
CDK9-203ENST00000480353 MAGI2Q86UL8 1455 aa24.49■■□□□ 1.51
CDK9-203ENST00000480353 MTUS2Q5JR59 1369 aa24.47■■□□□ 1.51
CDK9-203ENST00000480353 BCORL1Q5H9F3 1711 aa24.47■■□□□ 1.51
CDK9-203ENST00000480353 LOC105371045A0A1W2PR82 267 aa24.46■■□□□ 1.51
CDK9-203ENST00000480353 CDC42BPAQ5VT25 1732 aa24.46■■□□□ 1.51
CDK9-203ENST00000480353 ZNF518AQ6AHZ1 1483 aa24.45■■□□□ 1.51
CDK9-203ENST00000480353 ADAMTSL3P82987 1691 aa24.43■■□□□ 1.5
CDK9-203ENST00000480353 YEATS2Q9ULM3 1422 aa24.43■■□□□ 1.5
CDK9-203ENST00000480353 ZNF777Q9ULD5 760 aaPredicted RBP24.42■■□□□ 1.5
CDK9-203ENST00000480353 AFAP1Q8N556 730 aa24.39■■□□□ 1.49
CDK9-203ENST00000480353 CCNB3Q8WWL7 1395 aa24.39■■□□□ 1.49
CDK9-203ENST00000480353 MADDQ8WXG6 1647 aa24.39■■□□□ 1.49
CDK9-203ENST00000480353 ITSN2Q9NZM3 1697 aa24.38■■□□□ 1.49
CDK9-203ENST00000480353 ABCC1P33527 1531 aa24.37■■□□□ 1.49
CDK9-203ENST00000480353 ATP10AO60312 1499 aa24.37■■□□□ 1.49
CDK9-203ENST00000480353 HECW2Q9P2P5 1572 aa24.37■■□□□ 1.49
CDK9-203ENST00000480353 EHBP1L1Q8N3D4 1523 aa24.36■■□□□ 1.49
CDK9-203ENST00000480353 MLECQ14165 292 aa24.36■■□□□ 1.49
CDK9-203ENST00000480353 PTPRMP28827 1452 aa24.36■■□□□ 1.49
CDK9-203ENST00000480353 RIMS1Q86UR5 1692 aaKnown RBP24.36■■□□□ 1.49
CDK9-203ENST00000480353 C9orf84Q5VXU9 1444 aa24.35■■□□□ 1.49
CDK9-203ENST00000480353 KDM5CP41229 1560 aa24.35■■□□□ 1.49
CDK9-203ENST00000480353 CFDP1Q9UEE9 299 aaPredicted RBP24.34■■□□□ 1.49
CDK9-203ENST00000480353 GPATCH8Q9UKJ3 1502 aaKnown RBP24.33■■□□□ 1.49
CDK9-203ENST00000480353 PLPPR3Q6T4P5 718 aa24.31■■□□□ 1.48
CDK9-203ENST00000480353 SAMD9LQ8IVG5 1584 aa24.29■■□□□ 1.48
CDK9-203ENST00000480353 FER1L4A9Z1Z3 1794 aa24.29■■□□□ 1.48
CDK9-203ENST00000480353 VPS8Q8N3P4 1428 aa24.29■■□□□ 1.48
CDK9-203ENST00000480353 TRAPPC8Q9Y2L5 1435 aa24.29■■□□□ 1.48
CDK9-203ENST00000480353 ILDR1Q86SU0 546 aaPredicted RBP24.29■■□□□ 1.48
CDK9-203ENST00000480353 SIGLEC1Q9BZZ2 1709 aa24.29■■□□□ 1.48
CDK9-203ENST00000480353 PLEKHH2Q8IVE3 1493 aa24.28■■□□□ 1.48
CDK9-203ENST00000480353 SYCP2Q9BX26 1530 aa24.28■■□□□ 1.48
CDK9-203ENST00000480353 SUPT6HQ7KZ85 1726 aaKnown RBP24.27■■□□□ 1.48
CDK9-203ENST00000480353 MLH3Q9UHC1 1453 aa24.27■■□□□ 1.48
CDK9-203ENST00000480353 ARHGEF12Q9NZN5 1544 aa24.27■■□□□ 1.48
CDK9-203ENST00000480353 DIP2CQ9Y2E4 1556 aa24.26■■□□□ 1.47
CDK9-203ENST00000480353 HNRNPMP52272 730 aaKnown RBP eCLIP24.25■■□□□ 1.47
CDK9-203ENST00000480353 TIAM1Q13009 1591 aa24.25■■□□□ 1.47
CDK9-203ENST00000480353 ABCA6Q8N139 1617 aa24.24■■□□□ 1.47
CDK9-203ENST00000480353 SPAG9O60271 1321 aaKnown RBP24.23■■□□□ 1.47
CDK9-203ENST00000480353 ESF1Q9H501 851 aaKnown RBP24.21■■□□□ 1.47
CDK9-203ENST00000480353 KIDINS220Q9ULH0 1771 aa24.21■■□□□ 1.47
CDK9-203ENST00000480353 KIAA1107Q9UPP5 1409 aa24.19■■□□□ 1.46
CDK9-203ENST00000480353 APLP2Q06481 763 aa24.19■■□□□ 1.46
CDK9-203ENST00000480353 REREQ9P2R6 1566 aa24.19■■□□□ 1.46
CDK9-203ENST00000480353 NCOA2Q15596 1464 aa24.18■■□□□ 1.46
CDK9-203ENST00000480353 ATP7AQ04656 1500 aa24.15■■□□□ 1.46
CDK9-203ENST00000480353 LRRC9Q6ZRR7 1453 aa24.13■■□□□ 1.45
CDK9-203ENST00000480353 ZNF644Q9H582 1327 aaPredicted RBP24.12■■□□□ 1.45
CDK9-203ENST00000480353 AGLP35573 1532 aa24.11■■□□□ 1.45
CDK9-203ENST00000480353 MAP3K1Q13233 1512 aa24.1■■□□□ 1.45
CDK9-203ENST00000480353 INO80Q9ULG1 1556 aaPredicted RBP24.09■■□□□ 1.45
CDK9-203ENST00000480353 CAMSAP2Q08AD1 1489 aa24.07■■□□□ 1.44
CDK9-203ENST00000480353 ADGBQ8N7X0 1667 aa24.06■■□□□ 1.44
CDK9-203ENST00000480353 CEBPAP49715 358 aaPredicted RBP24.05■■□□□ 1.44
CDK9-203ENST00000480353 A2MP01023 1474 aa24.05■■□□□ 1.44
CDK9-203ENST00000480353 LMTK3Q96Q04 1460 aa24.05■■□□□ 1.44
CDK9-203ENST00000480353 RSPH4AQ5TD94 716 aa24.04■■□□□ 1.44
CDK9-203ENST00000480353 CCDC141Q6ZP82 1450 aa24.03■■□□□ 1.44
CDK9-203ENST00000480353 MBD5Q9P267 1494 aa24.03■■□□□ 1.44
CDK9-203ENST00000480353 KANK4Q5T7N3 995 aaPredicted RBP24.03■■□□□ 1.44
CDK9-203ENST00000480353 PREX1Q8TCU6 1659 aa24.02■■□□□ 1.44
CDK9-203ENST00000480353 CNTLNQ9NXG0 1405 aa24.01■■□□□ 1.43
CDK9-203ENST00000480353 TSPY4P0CV99 314 aa24■■□□□ 1.43
CDK9-203ENST00000480353 TSPY10P0CW01 314 aa24■■□□□ 1.43
CDK9-203ENST00000480353 RTEL1-TNFRSF6BF6WH68 1400 aa24■■□□□ 1.43
CDK9-203ENST00000480353 C3P01024 1663 aa23.99■■□□□ 1.43
CDK9-203ENST00000480353 HSPA2P54652 639 aa23.98■■□□□ 1.43
CDK9-203ENST00000480353 GGT6Q6P531 493 aa23.98■■□□□ 1.43
CDK9-203ENST00000480353 SETD1BQ9UPS6 1966 aaKnown RBP23.98■■□□□ 1.43
CDK9-203ENST00000480353 PLXNC1O60486 1568 aa23.97■■□□□ 1.43
CDK9-203ENST00000480353 MYOM3Q5VTT5 1437 aa23.96■■□□□ 1.43
CDK9-203ENST00000480353 ARHGEF5Q12774 1597 aa23.95■■□□□ 1.43
CDK9-203ENST00000480353 UHRF1BP1Q6BDS2 1440 aa23.94■■□□□ 1.42
CDK9-203ENST00000480353 MROH2AA6NES4 1674 aa23.93■■□□□ 1.42
CDK9-203ENST00000480353 CLTCQ00610 1675 aaKnown RBP23.93■■□□□ 1.42
CDK9-203ENST00000480353 MIA2Q96PC5 1412 aa23.93■■□□□ 1.42
CDK9-203ENST00000480353 DHX29Q7Z478 1369 aaKnown RBP23.91■■□□□ 1.42
CDK9-203ENST00000480353 KIF3BO15066 747 aa23.87■■□□□ 1.41
CDK9-203ENST00000480353 PPP6R1Q9UPN7 881 aa23.87■■□□□ 1.41
CDK9-203ENST00000480353 ZMYM3Q14202 1370 aa23.87■■□□□ 1.41
CDK9-203ENST00000480353 PTPN23Q9H3S7 1636 aa23.84■■□□□ 1.41
CDK9-203ENST00000480353 MAST1Q9Y2H9 1570 aa23.82■■□□□ 1.4
CDK9-203ENST00000480353 NPATQ14207 1427 aa23.81■■□□□ 1.4
CDK9-203ENST00000480353 DMRT2Q9Y5R5 561 aa23.78■■□□□ 1.4
CDK9-203ENST00000480353 WASHC2CQ9Y4E1 1318 aa23.78■■□□□ 1.4
CDK9-203ENST00000480353 FGD6Q6ZV73 1430 aa23.76■■□□□ 1.39
CDK9-203ENST00000480353 KDM5DQ9BY66 1539 aa23.76■■□□□ 1.39
CDK9-203ENST00000480353 CROCC2H7BZ55 1655 aa23.76■■□□□ 1.39
CDK9-203ENST00000480353 FAM135AQ9P2D6 1515 aa23.74■■□□□ 1.39
CDK9-203ENST00000480353 PTPRKQ15262 1439 aa23.72■■□□□ 1.39
CDK9-203ENST00000480353 MYO3AQ8NEV4 1616 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms