RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 POGZQ7Z3K3 1410 aa10.96□□□□□ -0.65
FN1-220ENST00000480024 CLIP1P30622 1438 aa10.95□□□□□ -0.66
FN1-220ENST00000480024 TROQ12816 1431 aaPredicted RBP10.95□□□□□ -0.66
FN1-220ENST00000480024 YEATS2Q9ULM3 1422 aa10.95□□□□□ -0.66
FN1-220ENST00000480024 CDK11AQ9UQ88 783 aaPredicted RBP10.95□□□□□ -0.66
FN1-220ENST00000480024 ARHGAP5Q13017 1502 aa10.94□□□□□ -0.66
FN1-220ENST00000480024 SCAPERQ9BY12 1400 aa10.94□□□□□ -0.66
FN1-220ENST00000480024 CCDC18Q5T9S5 1454 aa10.93□□□□□ -0.66
FN1-220ENST00000480024 CASKIN1Q8WXD9 1431 aa10.92□□□□□ -0.66
FN1-220ENST00000480024 MAGI2Q86UL8 1455 aa10.92□□□□□ -0.66
FN1-220ENST00000480024 CDC42BPBQ9Y5S2 1711 aa10.92□□□□□ -0.66
FN1-220ENST00000480024 PREX2Q70Z35 1606 aa10.91□□□□□ -0.66
FN1-220ENST00000480024 FER1L4A9Z1Z3 1794 aa10.91□□□□□ -0.66
FN1-220ENST00000480024 FYCO1Q9BQS8 1478 aa10.91□□□□□ -0.66
FN1-220ENST00000480024 EFCAB2Q5VUJ9 269 aa10.9□□□□□ -0.66
FN1-220ENST00000480024 ZNF518AQ6AHZ1 1483 aa10.89□□□□□ -0.67
FN1-220ENST00000480024 KDM5CP41229 1560 aa10.89□□□□□ -0.67
FN1-220ENST00000480024 CDC42BPAQ5VT25 1732 aa10.88□□□□□ -0.67
FN1-220ENST00000480024 C9orf84Q5VXU9 1444 aa10.88□□□□□ -0.67
FN1-220ENST00000480024 ITSN2Q9NZM3 1697 aa10.88□□□□□ -0.67
FN1-220ENST00000480024 ABCC1P33527 1531 aa10.88□□□□□ -0.67
FN1-220ENST00000480024 ATP10AO60312 1499 aa10.87□□□□□ -0.67
FN1-220ENST00000480024 LMTK3Q96Q04 1460 aa10.87□□□□□ -0.67
FN1-220ENST00000480024 MLECQ14165 292 aa10.87□□□□□ -0.67
FN1-220ENST00000480024 PLPPR3Q6T4P5 718 aa10.87□□□□□ -0.67
FN1-220ENST00000480024 ABCA6Q8N139 1617 aa10.87□□□□□ -0.67
FN1-220ENST00000480024 DIP2CQ9Y2E4 1556 aa10.86□□□□□ -0.67
FN1-220ENST00000480024 ILDR1Q86SU0 546 aaPredicted RBP10.86□□□□□ -0.67
FN1-220ENST00000480024 ARHGEF12Q9NZN5 1544 aa10.85□□□□□ -0.67
FN1-220ENST00000480024 AFAP1Q8N556 730 aa10.84□□□□□ -0.67
FN1-220ENST00000480024 MYT1LQ9UL68 1186 aa10.84□□□□□ -0.67
FN1-220ENST00000480024 TRAPPC8Q9Y2L5 1435 aa10.84□□□□□ -0.67
FN1-220ENST00000480024 SAMD9LQ8IVG5 1584 aa10.82□□□□□ -0.68
FN1-220ENST00000480024 SYCP2Q9BX26 1530 aa10.82□□□□□ -0.68
FN1-220ENST00000480024 REREQ9P2R6 1566 aa10.82□□□□□ -0.68
FN1-220ENST00000480024 MLH3Q9UHC1 1453 aa10.81□□□□□ -0.68
FN1-220ENST00000480024 KIDINS220Q9ULH0 1771 aa10.81□□□□□ -0.68
FN1-220ENST00000480024 PREX1Q8TCU6 1659 aa10.8□□□□□ -0.68
FN1-220ENST00000480024 CEP162Q5TB80 1403 aa10.8□□□□□ -0.68
FN1-220ENST00000480024 GPATCH8Q9UKJ3 1502 aaKnown RBP10.79□□□□□ -0.68
FN1-220ENST00000480024 HSPA2P54652 639 aa10.79□□□□□ -0.68
FN1-220ENST00000480024 ZNF777Q9ULD5 760 aaPredicted RBP10.79□□□□□ -0.68
FN1-220ENST00000480024 MTUS2Q5JR59 1369 aa10.78□□□□□ -0.68
FN1-220ENST00000480024 AGLP35573 1532 aa10.78□□□□□ -0.68
FN1-220ENST00000480024 EHBP1L1Q8N3D4 1523 aa10.78□□□□□ -0.68
FN1-220ENST00000480024 CCNB3Q8WWL7 1395 aa10.77□□□□□ -0.68
FN1-220ENST00000480024 TIAM1Q13009 1591 aa10.77□□□□□ -0.68
FN1-220ENST00000480024 INO80Q9ULG1 1556 aaPredicted RBP10.77□□□□□ -0.69
FN1-220ENST00000480024 C3P01024 1663 aa10.76□□□□□ -0.69
FN1-220ENST00000480024 ATP7AQ04656 1500 aa10.76□□□□□ -0.69
FN1-220ENST00000480024 CEBPAP49715 358 aaPredicted RBP10.76□□□□□ -0.69
FN1-220ENST00000480024 SUPT6HQ7KZ85 1726 aaKnown RBP10.75□□□□□ -0.69
FN1-220ENST00000480024 PLEKHH2Q8IVE3 1493 aa10.74□□□□□ -0.69
FN1-220ENST00000480024 HNRNPMP52272 730 aaKnown RBP eCLIP10.74□□□□□ -0.69
FN1-220ENST00000480024 CFDP1Q9UEE9 299 aaPredicted RBP10.74□□□□□ -0.69
FN1-220ENST00000480024 SPAG9O60271 1321 aaKnown RBP10.73□□□□□ -0.69
FN1-220ENST00000480024 KIAA1107Q9UPP5 1409 aa10.73□□□□□ -0.69
FN1-220ENST00000480024 PLXNC1O60486 1568 aa10.73□□□□□ -0.69
FN1-220ENST00000480024 ESF1Q9H501 851 aaKnown RBP10.72□□□□□ -0.69
FN1-220ENST00000480024 UHRF1BP1Q6BDS2 1440 aa10.72□□□□□ -0.69
FN1-220ENST00000480024 SETD1BQ9UPS6 1966 aaKnown RBP10.72□□□□□ -0.69
FN1-220ENST00000480024 MROH2AA6NES4 1674 aa10.71□□□□□ -0.69
FN1-220ENST00000480024 CLTCQ00610 1675 aaKnown RBP10.7□□□□□ -0.7
FN1-220ENST00000480024 ADGBQ8N7X0 1667 aa10.7□□□□□ -0.7
FN1-220ENST00000480024 A2MP01023 1474 aa10.7□□□□□ -0.7
FN1-220ENST00000480024 CNTLNQ9NXG0 1405 aa10.7□□□□□ -0.7
FN1-220ENST00000480024 ZNF644Q9H582 1327 aaPredicted RBP10.7□□□□□ -0.7
FN1-220ENST00000480024 FBXO41Q8TF61 875 aa10.7□□□□□ -0.7
FN1-220ENST00000480024 STRCQ7RTU9 1775 aa10.7□□□□□ -0.7
FN1-220ENST00000480024 NCOA2Q15596 1464 aa10.69□□□□□ -0.7
FN1-220ENST00000480024 CAMSAP2Q08AD1 1489 aa10.68□□□□□ -0.7
FN1-220ENST00000480024 MBD5Q9P267 1494 aa10.68□□□□□ -0.7
FN1-220ENST00000480024 VPS8Q8N3P4 1428 aa10.67□□□□□ -0.7
FN1-220ENST00000480024 LOC105371045A0A1W2PR82 267 aa10.66□□□□□ -0.7
FN1-220ENST00000480024 CCDC141Q6ZP82 1450 aa10.66□□□□□ -0.7
FN1-220ENST00000480024 MYO3AQ8NEV4 1616 aa10.66□□□□□ -0.7
FN1-220ENST00000480024 NPATQ14207 1427 aa10.65□□□□□ -0.7
FN1-220ENST00000480024 LRRC9Q6ZRR7 1453 aa10.64□□□□□ -0.71
FN1-220ENST00000480024 GGT6Q6P531 493 aa10.64□□□□□ -0.71
FN1-220ENST00000480024 ZMYM3Q14202 1370 aa10.64□□□□□ -0.71
FN1-220ENST00000480024 ZNF142P52746 1687 aaPredicted RBP10.63□□□□□ -0.71
FN1-220ENST00000480024 RTEL1-TNFRSF6BF6WH68 1400 aa10.63□□□□□ -0.71
FN1-220ENST00000480024 CAMSAP1Q5T5Y3 1602 aa10.62□□□□□ -0.71
FN1-220ENST00000480024 ARHGEF5Q12774 1597 aa10.62□□□□□ -0.71
FN1-220ENST00000480024 NCOA1Q15788 1441 aa10.62□□□□□ -0.71
FN1-220ENST00000480024 CERKQ8TCT0 537 aa10.62□□□□□ -0.71
FN1-220ENST00000480024 CEP170BQ9Y4F5 1589 aaPredicted RBP10.61□□□□□ -0.71
FN1-220ENST00000480024 PTPRKQ15262 1439 aa10.61□□□□□ -0.71
FN1-220ENST00000480024 DMRT2Q9Y5R5 561 aa10.61□□□□□ -0.71
FN1-220ENST00000480024 KDM5DQ9BY66 1539 aa10.6□□□□□ -0.71
FN1-220ENST00000480024 DHX29Q7Z478 1369 aaKnown RBP10.6□□□□□ -0.71
FN1-220ENST00000480024 PTPRTO14522 1441 aa10.59□□□□□ -0.71
FN1-220ENST00000480024 MAP3K1Q13233 1512 aa10.59□□□□□ -0.71
FN1-220ENST00000480024 KANK4Q5T7N3 995 aaPredicted RBP10.58□□□□□ -0.72
FN1-220ENST00000480024 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
FN1-220ENST00000480024 MAST1Q9Y2H9 1570 aa10.57□□□□□ -0.72
FN1-220ENST00000480024 KIF3BO15066 747 aa10.57□□□□□ -0.72
FN1-220ENST00000480024 FAM135AQ9P2D6 1515 aa10.57□□□□□ -0.72
FN1-220ENST00000480024 PLA2R1Q13018 1463 aa10.56□□□□□ -0.72
FN1-220ENST00000480024 RSPH4AQ5TD94 716 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms