RNA–Protein interactions for RNA: ENST00000479904.1

BARD1-208, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 4

Gene BARD1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-208ENST00000479904 ZFYVE16Q7Z3T8 1539 aa29.82■■■□□ 2.36
BARD1-208ENST00000479904 YEATS2Q9ULM3 1422 aa29.82■■■□□ 2.36
BARD1-208ENST00000479904 CLIP1P30622 1438 aa29.8■■■□□ 2.36
BARD1-208ENST00000479904 POGZQ7Z3K3 1410 aa29.8■■■□□ 2.36
BARD1-208ENST00000479904 EFCAB2Q5VUJ9 269 aa29.79■■■□□ 2.36
BARD1-208ENST00000479904 CASKIN1Q8WXD9 1431 aa29.79■■■□□ 2.36
BARD1-208ENST00000479904 SIGLEC1Q9BZZ2 1709 aa29.78■■■□□ 2.36
BARD1-208ENST00000479904 MAGI2Q86UL8 1455 aa29.77■■■□□ 2.36
BARD1-208ENST00000479904 ARHGAP5Q13017 1502 aa29.75■■■□□ 2.35
BARD1-208ENST00000479904 RIMS1Q86UR5 1692 aaKnown RBP29.74■■■□□ 2.35
BARD1-208ENST00000479904 CCDC18Q5T9S5 1454 aa29.74■■■□□ 2.35
BARD1-208ENST00000479904 CDC42BPBQ9Y5S2 1711 aa29.7■■■□□ 2.34
BARD1-208ENST00000479904 FYCO1Q9BQS8 1478 aa29.68■■■□□ 2.34
BARD1-208ENST00000479904 PREX2Q70Z35 1606 aa29.65■■■□□ 2.34
BARD1-208ENST00000479904 ZNF518AQ6AHZ1 1483 aa29.64■■■□□ 2.34
BARD1-208ENST00000479904 ATP10AO60312 1499 aa29.63■■■□□ 2.33
BARD1-208ENST00000479904 MLECQ14165 292 aa29.63■■■□□ 2.33
BARD1-208ENST00000479904 KDM5CP41229 1560 aa29.61■■■□□ 2.33
BARD1-208ENST00000479904 AFAP1Q8N556 730 aa29.61■■■□□ 2.33
BARD1-208ENST00000479904 C9orf84Q5VXU9 1444 aa29.6■■■□□ 2.33
BARD1-208ENST00000479904 FER1L4A9Z1Z3 1794 aa29.59■■■□□ 2.33
BARD1-208ENST00000479904 PLPPR3Q6T4P5 718 aa29.59■■■□□ 2.33
BARD1-208ENST00000479904 ILDR1Q86SU0 546 aaPredicted RBP29.59■■■□□ 2.33
BARD1-208ENST00000479904 CDC42BPAQ5VT25 1732 aa29.59■■■□□ 2.33
BARD1-208ENST00000479904 ABCC1P33527 1531 aa29.55■■■□□ 2.32
BARD1-208ENST00000479904 LMTK3Q96Q04 1460 aa29.55■■■□□ 2.32
BARD1-208ENST00000479904 MYT1LQ9UL68 1186 aa29.54■■■□□ 2.32
BARD1-208ENST00000479904 ARHGEF12Q9NZN5 1544 aa29.54■■■□□ 2.32
BARD1-208ENST00000479904 ITSN2Q9NZM3 1697 aa29.53■■■□□ 2.32
BARD1-208ENST00000479904 DIP2CQ9Y2E4 1556 aa29.52■■■□□ 2.32
BARD1-208ENST00000479904 TRAPPC8Q9Y2L5 1435 aa29.52■■■□□ 2.32
BARD1-208ENST00000479904 ABCA6Q8N139 1617 aa29.49■■■□□ 2.31
BARD1-208ENST00000479904 MLH3Q9UHC1 1453 aa29.48■■■□□ 2.31
BARD1-208ENST00000479904 GPATCH8Q9UKJ3 1502 aaKnown RBP29.45■■■□□ 2.3
BARD1-208ENST00000479904 SAMD9LQ8IVG5 1584 aa29.44■■■□□ 2.3
BARD1-208ENST00000479904 REREQ9P2R6 1566 aa29.44■■■□□ 2.3
BARD1-208ENST00000479904 ZNF777Q9ULD5 760 aaPredicted RBP29.44■■■□□ 2.3
BARD1-208ENST00000479904 HSPA2P54652 639 aa29.42■■■□□ 2.3
BARD1-208ENST00000479904 KIDINS220Q9ULH0 1771 aa29.41■■■□□ 2.3
BARD1-208ENST00000479904 CEP162Q5TB80 1403 aa29.4■■■□□ 2.3
BARD1-208ENST00000479904 SYCP2Q9BX26 1530 aa29.39■■■□□ 2.3
BARD1-208ENST00000479904 MTUS2Q5JR59 1369 aa29.39■■■□□ 2.29
BARD1-208ENST00000479904 CEBPAP49715 358 aaPredicted RBP29.37■■■□□ 2.29
BARD1-208ENST00000479904 CCNB3Q8WWL7 1395 aa29.35■■■□□ 2.29
BARD1-208ENST00000479904 AGLP35573 1532 aa29.34■■■□□ 2.29
BARD1-208ENST00000479904 HNRNPMP52272 730 aaKnown RBP eCLIP29.33■■■□□ 2.29
BARD1-208ENST00000479904 CFDP1Q9UEE9 299 aaPredicted RBP29.33■■■□□ 2.29
BARD1-208ENST00000479904 PREX1Q8TCU6 1659 aa29.31■■■□□ 2.28
BARD1-208ENST00000479904 EHBP1L1Q8N3D4 1523 aa29.3■■■□□ 2.28
BARD1-208ENST00000479904 SPAG9O60271 1321 aaKnown RBP29.28■■■□□ 2.28
BARD1-208ENST00000479904 TIAM1Q13009 1591 aa29.28■■■□□ 2.28
BARD1-208ENST00000479904 PLEKHH2Q8IVE3 1493 aa29.28■■■□□ 2.28
BARD1-208ENST00000479904 KIAA1107Q9UPP5 1409 aa29.27■■■□□ 2.28
BARD1-208ENST00000479904 C3P01024 1663 aa29.26■■■□□ 2.27
BARD1-208ENST00000479904 ATP7AQ04656 1500 aa29.25■■■□□ 2.27
BARD1-208ENST00000479904 INO80Q9ULG1 1556 aaPredicted RBP29.23■■■□□ 2.27
BARD1-208ENST00000479904 SUPT6HQ7KZ85 1726 aaKnown RBP29.23■■■□□ 2.27
BARD1-208ENST00000479904 ESF1Q9H501 851 aaKnown RBP29.22■■■□□ 2.27
BARD1-208ENST00000479904 SETD1BQ9UPS6 1966 aaKnown RBP29.21■■■□□ 2.27
BARD1-208ENST00000479904 ZNF644Q9H582 1327 aaPredicted RBP29.2■■■□□ 2.27
BARD1-208ENST00000479904 LOC105371045A0A1W2PR82 267 aa29.19■■■□□ 2.26
BARD1-208ENST00000479904 FBXO41Q8TF61 875 aa29.17■■■□□ 2.26
BARD1-208ENST00000479904 UHRF1BP1Q6BDS2 1440 aa29.17■■■□□ 2.26
BARD1-208ENST00000479904 PLXNC1O60486 1568 aa29.14■■■□□ 2.26
BARD1-208ENST00000479904 CNTLNQ9NXG0 1405 aa29.14■■■□□ 2.26
BARD1-208ENST00000479904 A2MP01023 1474 aa29.14■■■□□ 2.26
BARD1-208ENST00000479904 NCOA2Q15596 1464 aa29.12■■■□□ 2.25
BARD1-208ENST00000479904 MBD5Q9P267 1494 aa29.12■■■□□ 2.25
BARD1-208ENST00000479904 MROH2AA6NES4 1674 aa29.1■■■□□ 2.25
BARD1-208ENST00000479904 ADGBQ8N7X0 1667 aa29.1■■■□□ 2.25
BARD1-208ENST00000479904 STRCQ7RTU9 1775 aa29.1■■■□□ 2.25
BARD1-208ENST00000479904 VPS8Q8N3P4 1428 aa29.08■■■□□ 2.25
BARD1-208ENST00000479904 CLTCQ00610 1675 aaKnown RBP29.07■■■□□ 2.24
BARD1-208ENST00000479904 CAMSAP2Q08AD1 1489 aa29.04■■■□□ 2.24
BARD1-208ENST00000479904 ZMYM3Q14202 1370 aa29.03■■■□□ 2.24
BARD1-208ENST00000479904 GGT6Q6P531 493 aa29.02■■■□□ 2.24
BARD1-208ENST00000479904 RTEL1-TNFRSF6BF6WH68 1400 aa29.01■■■□□ 2.23
BARD1-208ENST00000479904 CCDC141Q6ZP82 1450 aa29■■■□□ 2.23
BARD1-208ENST00000479904 LRRC9Q6ZRR7 1453 aa29■■■□□ 2.23
BARD1-208ENST00000479904 NPATQ14207 1427 aa29■■■□□ 2.23
BARD1-208ENST00000479904 CERKQ8TCT0 537 aa28.97■■■□□ 2.23
BARD1-208ENST00000479904 DMRT2Q9Y5R5 561 aa28.97■■■□□ 2.23
BARD1-208ENST00000479904 DHX29Q7Z478 1369 aaKnown RBP28.93■■■□□ 2.22
BARD1-208ENST00000479904 ARHGEF5Q12774 1597 aa28.92■■■□□ 2.22
BARD1-208ENST00000479904 KANK4Q5T7N3 995 aaPredicted RBP28.91■■■□□ 2.22
BARD1-208ENST00000479904 PTPRKQ15262 1439 aa28.9■■■□□ 2.22
BARD1-208ENST00000479904 RSPH4AQ5TD94 716 aa28.9■■■□□ 2.22
BARD1-208ENST00000479904 MYO3AQ8NEV4 1616 aa28.9■■■□□ 2.22
BARD1-208ENST00000479904 MAP3K1Q13233 1512 aa28.89■■■□□ 2.22
BARD1-208ENST00000479904 NCOA1Q15788 1441 aa28.89■■■□□ 2.22
BARD1-208ENST00000479904 PPP6R1Q9UPN7 881 aa28.89■■■□□ 2.22
BARD1-208ENST00000479904 PTPRTO14522 1441 aa28.88■■■□□ 2.21
BARD1-208ENST00000479904 CAMSAP1Q5T5Y3 1602 aa28.88■■■□□ 2.21
BARD1-208ENST00000479904 KIF3BO15066 747 aa28.87■■■□□ 2.21
BARD1-208ENST00000479904 ZNF142P52746 1687 aaPredicted RBP28.86■■■□□ 2.21
BARD1-208ENST00000479904 CEP170BQ9Y4F5 1589 aaPredicted RBP28.83■■■□□ 2.21
BARD1-208ENST00000479904 TSPY4P0CV99 314 aa28.82■■■□□ 2.2
BARD1-208ENST00000479904 TSPY10P0CW01 314 aa28.82■■■□□ 2.2
BARD1-208ENST00000479904 MYOM3Q5VTT5 1437 aa28.8■■■□□ 2.2
BARD1-208ENST00000479904 KDM5DQ9BY66 1539 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms