RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-222ENST00000479596 ARHGAP5Q13017 1502 aa24.32■■□□□ 1.48
CCNL1-222ENST00000479596 EFCAB2Q5VUJ9 269 aa24.32■■□□□ 1.48
CCNL1-222ENST00000479596 YEATS2Q9ULM3 1422 aa24.31■■□□□ 1.48
CCNL1-222ENST00000479596 ADAMTSL3P82987 1691 aa24.3■■□□□ 1.48
CCNL1-222ENST00000479596 ZFYVE16Q7Z3T8 1539 aa24.3■■□□□ 1.48
CCNL1-222ENST00000479596 CDC42BPBQ9Y5S2 1711 aa24.3■■□□□ 1.48
CCNL1-222ENST00000479596 PREX2Q70Z35 1606 aa24.29■■□□□ 1.48
CCNL1-222ENST00000479596 MAGI2Q86UL8 1455 aa24.29■■□□□ 1.48
CCNL1-222ENST00000479596 BCORL1Q5H9F3 1711 aa24.27■■□□□ 1.48
CCNL1-222ENST00000479596 SIGLEC1Q9BZZ2 1709 aa24.27■■□□□ 1.48
CCNL1-222ENST00000479596 CDC42BPAQ5VT25 1732 aa24.24■■□□□ 1.47
CCNL1-222ENST00000479596 KDM5CP41229 1560 aa24.23■■□□□ 1.47
CCNL1-222ENST00000479596 ZNF518AQ6AHZ1 1483 aa24.22■■□□□ 1.47
CCNL1-222ENST00000479596 MADDQ8WXG6 1647 aa24.21■■□□□ 1.47
CCNL1-222ENST00000479596 ABCC1P33527 1531 aa24.21■■□□□ 1.47
CCNL1-222ENST00000479596 ARID4BQ4LE39 1312 aaPredicted RBP24.21■■□□□ 1.47
CCNL1-222ENST00000479596 ARHGEF12Q9NZN5 1544 aa24.2■■□□□ 1.47
CCNL1-222ENST00000479596 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.46
CCNL1-222ENST00000479596 PTPRMP28827 1452 aa24.19■■□□□ 1.46
CCNL1-222ENST00000479596 GPATCH8Q9UKJ3 1502 aaKnown RBP24.18■■□□□ 1.46
CCNL1-222ENST00000479596 HECW2Q9P2P5 1572 aa24.17■■□□□ 1.46
CCNL1-222ENST00000479596 AFAP1Q8N556 730 aa24.17■■□□□ 1.46
CCNL1-222ENST00000479596 ITSN2Q9NZM3 1697 aa24.16■■□□□ 1.46
CCNL1-222ENST00000479596 ATP10AO60312 1499 aa24.15■■□□□ 1.46
CCNL1-222ENST00000479596 TRAPPC8Q9Y2L5 1435 aa24.15■■□□□ 1.46
CCNL1-222ENST00000479596 SAMD9LQ8IVG5 1584 aa24.13■■□□□ 1.45
CCNL1-222ENST00000479596 C9orf84Q5VXU9 1444 aa24.13■■□□□ 1.45
CCNL1-222ENST00000479596 MTUS2Q5JR59 1369 aa24.13■■□□□ 1.45
CCNL1-222ENST00000479596 EHBP1L1Q8N3D4 1523 aa24.12■■□□□ 1.45
CCNL1-222ENST00000479596 MLH3Q9UHC1 1453 aa24.11■■□□□ 1.45
CCNL1-222ENST00000479596 DIP2CQ9Y2E4 1556 aa24.11■■□□□ 1.45
CCNL1-222ENST00000479596 RIMS1Q86UR5 1692 aaKnown RBP24.1■■□□□ 1.45
CCNL1-222ENST00000479596 ABCA6Q8N139 1617 aa24.09■■□□□ 1.45
CCNL1-222ENST00000479596 TIAM1Q13009 1591 aa24.08■■□□□ 1.44
CCNL1-222ENST00000479596 CCNB3Q8WWL7 1395 aa24.07■■□□□ 1.44
CCNL1-222ENST00000479596 SYCP2Q9BX26 1530 aa24.07■■□□□ 1.44
CCNL1-222ENST00000479596 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
CCNL1-222ENST00000479596 REREQ9P2R6 1566 aa24.06■■□□□ 1.44
CCNL1-222ENST00000479596 ZNF777Q9ULD5 760 aaPredicted RBP24.05■■□□□ 1.44
CCNL1-222ENST00000479596 KIDINS220Q9ULH0 1771 aa24.03■■□□□ 1.44
CCNL1-222ENST00000479596 MLECQ14165 292 aa24.03■■□□□ 1.44
CCNL1-222ENST00000479596 KIAA1107Q9UPP5 1409 aa24.02■■□□□ 1.44
CCNL1-222ENST00000479596 CFDP1Q9UEE9 299 aaPredicted RBP24.02■■□□□ 1.44
CCNL1-222ENST00000479596 FER1L4A9Z1Z3 1794 aa24.01■■□□□ 1.43
CCNL1-222ENST00000479596 PLEKHH2Q8IVE3 1493 aa24■■□□□ 1.43
CCNL1-222ENST00000479596 HNRNPMP52272 730 aaKnown RBP eCLIP23.99■■□□□ 1.437e-11■■■■□ 25.8
CCNL1-222ENST00000479596 MYT1LQ9UL68 1186 aa23.99■■□□□ 1.43
CCNL1-222ENST00000479596 NCOA2Q15596 1464 aa23.98■■□□□ 1.43
CCNL1-222ENST00000479596 AGLP35573 1532 aa23.97■■□□□ 1.43
CCNL1-222ENST00000479596 SUPT6HQ7KZ85 1726 aaKnown RBP23.96■■□□□ 1.43
CCNL1-222ENST00000479596 LMTK3Q96Q04 1460 aa23.95■■□□□ 1.42
CCNL1-222ENST00000479596 ZNF644Q9H582 1327 aaPredicted RBP23.95■■□□□ 1.42
CCNL1-222ENST00000479596 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.42
CCNL1-222ENST00000479596 LRRC9Q6ZRR7 1453 aa23.94■■□□□ 1.42
CCNL1-222ENST00000479596 MBD5Q9P267 1494 aa23.94■■□□□ 1.42
CCNL1-222ENST00000479596 SPAG9O60271 1321 aaKnown RBP23.93■■□□□ 1.42
CCNL1-222ENST00000479596 ATP7AQ04656 1500 aa23.93■■□□□ 1.42
CCNL1-222ENST00000479596 MAP3K1Q13233 1512 aa23.9■■□□□ 1.42
CCNL1-222ENST00000479596 PLPPR3Q6T4P5 718 aa23.89■■□□□ 1.41
CCNL1-222ENST00000479596 PLXNC1O60486 1568 aa23.87■■□□□ 1.41
CCNL1-222ENST00000479596 KANK4Q5T7N3 995 aaPredicted RBP23.86■■□□□ 1.41
CCNL1-222ENST00000479596 CAMSAP2Q08AD1 1489 aa23.86■■□□□ 1.41
CCNL1-222ENST00000479596 CEBPAP49715 358 aaPredicted RBP23.83■■□□□ 1.41
CCNL1-222ENST00000479596 A2MP01023 1474 aa23.82■■□□□ 1.4
CCNL1-222ENST00000479596 CCDC141Q6ZP82 1450 aa23.8■■□□□ 1.4
CCNL1-222ENST00000479596 RTEL1-TNFRSF6BF6WH68 1400 aa23.79■■□□□ 1.4
CCNL1-222ENST00000479596 C3P01024 1663 aa23.79■■□□□ 1.4
CCNL1-222ENST00000479596 ADGBQ8N7X0 1667 aa23.78■■□□□ 1.4
CCNL1-222ENST00000479596 HSPA2P54652 639 aa23.77■■□□□ 1.4
CCNL1-222ENST00000479596 ARHGEF5Q12774 1597 aa23.77■■□□□ 1.4
CCNL1-222ENST00000479596 PREX1Q8TCU6 1659 aa23.76■■□□□ 1.39
CCNL1-222ENST00000479596 CNTLNQ9NXG0 1405 aa23.75■■□□□ 1.39
CCNL1-222ENST00000479596 MYOM3Q5VTT5 1437 aa23.73■■□□□ 1.39
CCNL1-222ENST00000479596 MROH2AA6NES4 1674 aa23.71■■□□□ 1.39
CCNL1-222ENST00000479596 MIA2Q96PC5 1412 aa23.7■■□□□ 1.38
CCNL1-222ENST00000479596 DHX29Q7Z478 1369 aaKnown RBP23.7■■□□□ 1.38
CCNL1-222ENST00000479596 RSPH4AQ5TD94 716 aa23.7■■□□□ 1.38
CCNL1-222ENST00000479596 ESF1Q9H501 851 aaKnown RBP23.7■■□□□ 1.38
CCNL1-222ENST00000479596 CLTCQ00610 1675 aaKnown RBP23.67■■□□□ 1.38
CCNL1-222ENST00000479596 UHRF1BP1Q6BDS2 1440 aa23.67■■□□□ 1.38
CCNL1-222ENST00000479596 ZMYM3Q14202 1370 aa23.65■■□□□ 1.38
CCNL1-222ENST00000479596 MAST1Q9Y2H9 1570 aa23.65■■□□□ 1.38
CCNL1-222ENST00000479596 GGT6Q6P531 493 aa23.65■■□□□ 1.38
CCNL1-222ENST00000479596 SETD1BQ9UPS6 1966 aaKnown RBP23.64■■□□□ 1.38
CCNL1-222ENST00000479596 NPATQ14207 1427 aa23.62■■□□□ 1.37
CCNL1-222ENST00000479596 APLP2Q06481 763 aa23.62■■□□□ 1.37
CCNL1-222ENST00000479596 ILDR1Q86SU0 546 aaPredicted RBP23.62■■□□□ 1.37
CCNL1-222ENST00000479596 TSPY4P0CV99 314 aa23.6■■□□□ 1.37
CCNL1-222ENST00000479596 TSPY10P0CW01 314 aa23.6■■□□□ 1.37
CCNL1-222ENST00000479596 PPP6R1Q9UPN7 881 aa23.6■■□□□ 1.37
CCNL1-222ENST00000479596 PTPRKQ15262 1439 aa23.59■■□□□ 1.37
CCNL1-222ENST00000479596 PTPN23Q9H3S7 1636 aa23.58■■□□□ 1.36
CCNL1-222ENST00000479596 STRCQ7RTU9 1775 aa23.57■■□□□ 1.36
CCNL1-222ENST00000479596 KIF3BO15066 747 aa23.57■■□□□ 1.36
CCNL1-222ENST00000479596 FGD6Q6ZV73 1430 aa23.56■■□□□ 1.36
CCNL1-222ENST00000479596 TCOF1Q13428 1488 aaKnown RBP23.55■■□□□ 1.36
CCNL1-222ENST00000479596 FAM135AQ9P2D6 1515 aa23.54■■□□□ 1.36
CCNL1-222ENST00000479596 ABCC5O15440 1437 aa23.54■■□□□ 1.36
CCNL1-222ENST00000479596 KDM5DQ9BY66 1539 aa23.54■■□□□ 1.36
CCNL1-222ENST00000479596 MYO3AQ8NEV4 1616 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms