RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 FYCO1Q9BQS8 1478 aa14.14□□□□□ -0.15
XRCC6-208ENST00000478914 EFCAB2Q5VUJ9 269 aa14.14□□□□□ -0.15
XRCC6-208ENST00000478914 ARHGAP5Q13017 1502 aa14.14□□□□□ -0.15
XRCC6-208ENST00000478914 ZFYVE16Q7Z3T8 1539 aa14.14□□□□□ -0.15
XRCC6-208ENST00000478914 SCAPERQ9BY12 1400 aa14.13□□□□□ -0.15
XRCC6-208ENST00000478914 HECW2Q9P2P5 1572 aa14.13□□□□□ -0.15
XRCC6-208ENST00000478914 CDC42BPBQ9Y5S2 1711 aa14.12□□□□□ -0.15
XRCC6-208ENST00000478914 MAGI2Q86UL8 1455 aa14.12□□□□□ -0.15
XRCC6-208ENST00000478914 POGZQ7Z3K3 1410 aa14.11□□□□□ -0.15
XRCC6-208ENST00000478914 PREX2Q70Z35 1606 aa14.11□□□□□ -0.15
XRCC6-208ENST00000478914 MADDQ8WXG6 1647 aa14.11□□□□□ -0.15
XRCC6-208ENST00000478914 RIMS1Q86UR5 1692 aaKnown RBP14.1□□□□□ -0.15
XRCC6-208ENST00000478914 CDC42BPAQ5VT25 1732 aa14.09□□□□□ -0.15
XRCC6-208ENST00000478914 PTPRMP28827 1452 aa14.08□□□□□ -0.16
XRCC6-208ENST00000478914 ZNF518AQ6AHZ1 1483 aa14.08□□□□□ -0.16
XRCC6-208ENST00000478914 YEATS2Q9ULM3 1422 aa14.07□□□□□ -0.16
XRCC6-208ENST00000478914 MYT1LQ9UL68 1186 aa14.06□□□□□ -0.16
XRCC6-208ENST00000478914 ITSN2Q9NZM3 1697 aa14.06□□□□□ -0.16
XRCC6-208ENST00000478914 FER1L4A9Z1Z3 1794 aa14.06□□□□□ -0.16
XRCC6-208ENST00000478914 SIGLEC1Q9BZZ2 1709 aa14.04□□□□□ -0.16
XRCC6-208ENST00000478914 ATP10AO60312 1499 aa14.04□□□□□ -0.16
XRCC6-208ENST00000478914 KDM5CP41229 1560 aa14.04□□□□□ -0.16
XRCC6-208ENST00000478914 C9orf84Q5VXU9 1444 aa14.03□□□□□ -0.16
XRCC6-208ENST00000478914 ABCC1P33527 1531 aa14.03□□□□□ -0.16
XRCC6-208ENST00000478914 CEP162Q5TB80 1403 aa14.02□□□□□ -0.16
XRCC6-208ENST00000478914 MTUS2Q5JR59 1369 aa14□□□□□ -0.17
XRCC6-208ENST00000478914 MLECQ14165 292 aa14□□□□□ -0.17
XRCC6-208ENST00000478914 AFAP1Q8N556 730 aa14□□□□□ -0.17
XRCC6-208ENST00000478914 DIP2CQ9Y2E4 1556 aa13.99□□□□□ -0.17
XRCC6-208ENST00000478914 ABCA6Q8N139 1617 aa13.98□□□□□ -0.17
XRCC6-208ENST00000478914 ZNF777Q9ULD5 760 aaPredicted RBP13.98□□□□□ -0.17
XRCC6-208ENST00000478914 CCNB3Q8WWL7 1395 aa13.97□□□□□ -0.17
XRCC6-208ENST00000478914 SAMD9LQ8IVG5 1584 aa13.97□□□□□ -0.17
XRCC6-208ENST00000478914 EHBP1L1Q8N3D4 1523 aa13.97□□□□□ -0.17
XRCC6-208ENST00000478914 PLPPR3Q6T4P5 718 aa13.97□□□□□ -0.17
XRCC6-208ENST00000478914 MLH3Q9UHC1 1453 aa13.97□□□□□ -0.17
XRCC6-208ENST00000478914 REREQ9P2R6 1566 aa13.96□□□□□ -0.17
XRCC6-208ENST00000478914 TRAPPC8Q9Y2L5 1435 aa13.96□□□□□ -0.18
XRCC6-208ENST00000478914 KIDINS220Q9ULH0 1771 aa13.96□□□□□ -0.18
XRCC6-208ENST00000478914 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
XRCC6-208ENST00000478914 ARHGEF12Q9NZN5 1544 aa13.95□□□□□ -0.18
XRCC6-208ENST00000478914 GPATCH8Q9UKJ3 1502 aaKnown RBP13.95□□□□□ -0.18
XRCC6-208ENST00000478914 PLEKHH2Q8IVE3 1493 aa13.94□□□□□ -0.18
XRCC6-208ENST00000478914 CFDP1Q9UEE9 299 aaPredicted RBP13.94□□□□□ -0.18
XRCC6-208ENST00000478914 SUPT6HQ7KZ85 1726 aaKnown RBP13.93□□□□□ -0.18
XRCC6-208ENST00000478914 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
XRCC6-208ENST00000478914 LMTK3Q96Q04 1460 aa13.92□□□□□ -0.18
XRCC6-208ENST00000478914 PREX1Q8TCU6 1659 aa13.91□□□□□ -0.18
XRCC6-208ENST00000478914 AGLP35573 1532 aa13.9□□□□□ -0.18
XRCC6-208ENST00000478914 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.18
XRCC6-208ENST00000478914 FBXO41Q8TF61 875 aa13.9□□□□□ -0.18
XRCC6-208ENST00000478914 ESF1Q9H501 851 aaKnown RBP13.9□□□□□ -0.18
XRCC6-208ENST00000478914 ATP7AQ04656 1500 aa13.9□□□□□ -0.19
XRCC6-208ENST00000478914 KIAA1107Q9UPP5 1409 aa13.9□□□□□ -0.19
XRCC6-208ENST00000478914 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.19
XRCC6-208ENST00000478914 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
XRCC6-208ENST00000478914 SETD1BQ9UPS6 1966 aaKnown RBP13.89□□□□□ -0.19
XRCC6-208ENST00000478914 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
XRCC6-208ENST00000478914 C3P01024 1663 aa13.87□□□□□ -0.19
XRCC6-208ENST00000478914 ADGBQ8N7X0 1667 aa13.87□□□□□ -0.19
XRCC6-208ENST00000478914 VPS8Q8N3P4 1428 aa13.87□□□□□ -0.19
XRCC6-208ENST00000478914 NCOA2Q15596 1464 aa13.85□□□□□ -0.19
XRCC6-208ENST00000478914 CEBPAP49715 358 aaPredicted RBP13.84□□□□□ -0.19
XRCC6-208ENST00000478914 MROH2AA6NES4 1674 aa13.84□□□□□ -0.19
XRCC6-208ENST00000478914 CNTLNQ9NXG0 1405 aa13.83□□□□□ -0.2
XRCC6-208ENST00000478914 HSPA2P54652 639 aa13.83□□□□□ -0.2
XRCC6-208ENST00000478914 A2MP01023 1474 aa13.82□□□□□ -0.2
XRCC6-208ENST00000478914 ZNF644Q9H582 1327 aaPredicted RBP13.82□□□□□ -0.2
XRCC6-208ENST00000478914 UHRF1BP1Q6BDS2 1440 aa13.81□□□□□ -0.2
XRCC6-208ENST00000478914 CAMSAP2Q08AD1 1489 aa13.81□□□□□ -0.2
XRCC6-208ENST00000478914 PLXNC1O60486 1568 aa13.81□□□□□ -0.2
XRCC6-208ENST00000478914 CLTCQ00610 1675 aaKnown RBP13.81□□□□□ -0.2
XRCC6-208ENST00000478914 LRRC9Q6ZRR7 1453 aa13.8□□□□□ -0.2
XRCC6-208ENST00000478914 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
XRCC6-208ENST00000478914 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
XRCC6-208ENST00000478914 RTEL1-TNFRSF6BF6WH68 1400 aa13.79□□□□□ -0.2
XRCC6-208ENST00000478914 CCDC141Q6ZP82 1450 aa13.79□□□□□ -0.2
XRCC6-208ENST00000478914 ARHGEF5Q12774 1597 aa13.77□□□□□ -0.21
XRCC6-208ENST00000478914 RSPH4AQ5TD94 716 aa13.77□□□□□ -0.21
XRCC6-208ENST00000478914 APLP2Q06481 763 aa13.76□□□□□ -0.21
XRCC6-208ENST00000478914 GGT6Q6P531 493 aa13.75□□□□□ -0.21
XRCC6-208ENST00000478914 STRCQ7RTU9 1775 aa13.75□□□□□ -0.21
XRCC6-208ENST00000478914 NPATQ14207 1427 aa13.73□□□□□ -0.21
XRCC6-208ENST00000478914 ZMYM3Q14202 1370 aa13.73□□□□□ -0.21
XRCC6-208ENST00000478914 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
XRCC6-208ENST00000478914 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
XRCC6-208ENST00000478914 DHX29Q7Z478 1369 aaKnown RBP13.72□□□□□ -0.21
XRCC6-208ENST00000478914 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
XRCC6-208ENST00000478914 DMRT2Q9Y5R5 561 aa13.72□□□□□ -0.21
XRCC6-208ENST00000478914 MYOM3Q5VTT5 1437 aa13.72□□□□□ -0.21
XRCC6-208ENST00000478914 KANK4Q5T7N3 995 aaPredicted RBP13.71□□□□□ -0.21
XRCC6-208ENST00000478914 MIA2Q96PC5 1412 aa13.71□□□□□ -0.22
XRCC6-208ENST00000478914 MYO3AQ8NEV4 1616 aa13.71□□□□□ -0.22
XRCC6-208ENST00000478914 ZNF142P52746 1687 aaPredicted RBP13.7□□□□□ -0.22
XRCC6-208ENST00000478914 MAST1Q9Y2H9 1570 aa13.7□□□□□ -0.22
XRCC6-208ENST00000478914 KIF3BO15066 747 aa13.69□□□□□ -0.22
XRCC6-208ENST00000478914 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
XRCC6-208ENST00000478914 KDM5DQ9BY66 1539 aa13.68□□□□□ -0.22
XRCC6-208ENST00000478914 CROCC2H7BZ55 1655 aa13.67□□□□□ -0.22
XRCC6-208ENST00000478914 CAMSAP1Q5T5Y3 1602 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms