RNA–Protein interactions for RNA: ENST00000478509.1

FAM50A-204, Transcript of family with sequence similarity 50 member A, humanhuman

TSL 3

Gene FAM50A, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM50A-204ENST00000478509 PREX2Q70Z35 1606 aa24.34■■□□□ 1.49
FAM50A-204ENST00000478509 SCAPERQ9BY12 1400 aa24.34■■□□□ 1.49
FAM50A-204ENST00000478509 CDC42BPAQ5VT25 1732 aa24.32■■□□□ 1.48
FAM50A-204ENST00000478509 ZMYM4Q5VZL5 1548 aa24.31■■□□□ 1.48
FAM50A-204ENST00000478509 POGZQ7Z3K3 1410 aa24.31■■□□□ 1.48
FAM50A-204ENST00000478509 EFCAB2Q5VUJ9 269 aa24.3■■□□□ 1.48
FAM50A-204ENST00000478509 ZFYVE16Q7Z3T8 1539 aa24.3■■□□□ 1.48
FAM50A-204ENST00000478509 YEATS2Q9ULM3 1422 aa24.27■■□□□ 1.48
FAM50A-204ENST00000478509 ARID4BQ4LE39 1312 aaPredicted RBP24.26■■□□□ 1.47
FAM50A-204ENST00000478509 SIGLEC1Q9BZZ2 1709 aa24.25■■□□□ 1.47
FAM50A-204ENST00000478509 BCORL1Q5H9F3 1711 aa24.24■■□□□ 1.47
FAM50A-204ENST00000478509 ITSN2Q9NZM3 1697 aa24.23■■□□□ 1.47
FAM50A-204ENST00000478509 ADAMTSL3P82987 1691 aa24.22■■□□□ 1.47
FAM50A-204ENST00000478509 ABCC1P33527 1531 aa24.22■■□□□ 1.47
FAM50A-204ENST00000478509 MTUS2Q5JR59 1369 aa24.22■■□□□ 1.47
FAM50A-204ENST00000478509 ZNF518AQ6AHZ1 1483 aa24.2■■□□□ 1.47
FAM50A-204ENST00000478509 MADDQ8WXG6 1647 aa24.2■■□□□ 1.46
FAM50A-204ENST00000478509 EHBP1L1Q8N3D4 1523 aa24.19■■□□□ 1.46
FAM50A-204ENST00000478509 MAGI2Q86UL8 1455 aa24.19■■□□□ 1.46
FAM50A-204ENST00000478509 KDM5CP41229 1560 aa24.18■■□□□ 1.46
FAM50A-204ENST00000478509 SAMD9LQ8IVG5 1584 aa24.17■■□□□ 1.46
FAM50A-204ENST00000478509 ZNF777Q9ULD5 760 aaPredicted RBP24.17■■□□□ 1.46
FAM50A-204ENST00000478509 HECW2Q9P2P5 1572 aa24.16■■□□□ 1.46
FAM50A-204ENST00000478509 ARHGEF12Q9NZN5 1544 aa24.16■■□□□ 1.46
FAM50A-204ENST00000478509 GPATCH8Q9UKJ3 1502 aaKnown RBP24.16■■□□□ 1.46
FAM50A-204ENST00000478509 AFAP1Q8N556 730 aa24.16■■□□□ 1.46
FAM50A-204ENST00000478509 MYT1LQ9UL68 1186 aa24.16■■□□□ 1.46
FAM50A-204ENST00000478509 RIMS1Q86UR5 1692 aaKnown RBP24.15■■□□□ 1.46
FAM50A-204ENST00000478509 VPS8Q8N3P4 1428 aa24.14■■□□□ 1.45
FAM50A-204ENST00000478509 TRAPPC8Q9Y2L5 1435 aa24.14■■□□□ 1.45
FAM50A-204ENST00000478509 TIAM1Q13009 1591 aa24.13■■□□□ 1.45
FAM50A-204ENST00000478509 SYCP2Q9BX26 1530 aa24.13■■□□□ 1.45
FAM50A-204ENST00000478509 CCNB3Q8WWL7 1395 aa24.13■■□□□ 1.45
FAM50A-204ENST00000478509 ABCA6Q8N139 1617 aa24.11■■□□□ 1.45
FAM50A-204ENST00000478509 PTPRMP28827 1452 aa24.11■■□□□ 1.45
FAM50A-204ENST00000478509 C9orf84Q5VXU9 1444 aa24.1■■□□□ 1.45
FAM50A-204ENST00000478509 MLECQ14165 292 aa24.1■■□□□ 1.45
FAM50A-204ENST00000478509 DIP2CQ9Y2E4 1556 aa24.1■■□□□ 1.45
FAM50A-204ENST00000478509 ATP10AO60312 1499 aa24.09■■□□□ 1.45
FAM50A-204ENST00000478509 FER1L4A9Z1Z3 1794 aa24.08■■□□□ 1.45
FAM50A-204ENST00000478509 SUPT6HQ7KZ85 1726 aaKnown RBP24.08■■□□□ 1.45
FAM50A-204ENST00000478509 CFDP1Q9UEE9 299 aaPredicted RBP24.07■■□□□ 1.44
FAM50A-204ENST00000478509 KIDINS220Q9ULH0 1771 aa24.06■■□□□ 1.44
FAM50A-204ENST00000478509 PLPPR3Q6T4P5 718 aa24.05■■□□□ 1.44
FAM50A-204ENST00000478509 MLH3Q9UHC1 1453 aa24.04■■□□□ 1.44
FAM50A-204ENST00000478509 NCOA2Q15596 1464 aa24.02■■□□□ 1.44
FAM50A-204ENST00000478509 HNRNPMP52272 730 aaKnown RBP eCLIP24.02■■□□□ 1.44
FAM50A-204ENST00000478509 PLEKHH2Q8IVE3 1493 aa23.99■■□□□ 1.43
FAM50A-204ENST00000478509 ZNF644Q9H582 1327 aaPredicted RBP23.98■■□□□ 1.43
FAM50A-204ENST00000478509 LRRC9Q6ZRR7 1453 aa23.98■■□□□ 1.43
FAM50A-204ENST00000478509 REREQ9P2R6 1566 aa23.97■■□□□ 1.43
FAM50A-204ENST00000478509 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.43
FAM50A-204ENST00000478509 ATP7AQ04656 1500 aa23.95■■□□□ 1.43
FAM50A-204ENST00000478509 KIAA1107Q9UPP5 1409 aa23.95■■□□□ 1.42
FAM50A-204ENST00000478509 SPAG9O60271 1321 aaKnown RBP23.94■■□□□ 1.42
FAM50A-204ENST00000478509 KANK4Q5T7N3 995 aaPredicted RBP23.92■■□□□ 1.42
FAM50A-204ENST00000478509 CAMSAP2Q08AD1 1489 aa23.92■■□□□ 1.42
FAM50A-204ENST00000478509 MAP3K1Q13233 1512 aa23.89■■□□□ 1.42
FAM50A-204ENST00000478509 MBD5Q9P267 1494 aa23.88■■□□□ 1.41
FAM50A-204ENST00000478509 AGLP35573 1532 aa23.88■■□□□ 1.41
FAM50A-204ENST00000478509 ADGBQ8N7X0 1667 aa23.84■■□□□ 1.41
FAM50A-204ENST00000478509 LMTK3Q96Q04 1460 aa23.84■■□□□ 1.41
FAM50A-204ENST00000478509 PLXNC1O60486 1568 aa23.83■■□□□ 1.41
FAM50A-204ENST00000478509 CCDC141Q6ZP82 1450 aa23.83■■□□□ 1.41
FAM50A-204ENST00000478509 A2MP01023 1474 aa23.82■■□□□ 1.4
FAM50A-204ENST00000478509 CEBPAP49715 358 aaPredicted RBP23.82■■□□□ 1.4
FAM50A-204ENST00000478509 APLP2Q06481 763 aa23.82■■□□□ 1.4
FAM50A-204ENST00000478509 C3P01024 1663 aa23.81■■□□□ 1.4
FAM50A-204ENST00000478509 ARHGEF5Q12774 1597 aa23.78■■□□□ 1.4
FAM50A-204ENST00000478509 MYOM3Q5VTT5 1437 aa23.77■■□□□ 1.4
FAM50A-204ENST00000478509 ESF1Q9H501 851 aaKnown RBP23.77■■□□□ 1.4
FAM50A-204ENST00000478509 PREX1Q8TCU6 1659 aa23.76■■□□□ 1.39
FAM50A-204ENST00000478509 CLTCQ00610 1675 aaKnown RBP23.75■■□□□ 1.39
FAM50A-204ENST00000478509 HSPA2P54652 639 aa23.74■■□□□ 1.39
FAM50A-204ENST00000478509 RTEL1-TNFRSF6BF6WH68 1400 aa23.74■■□□□ 1.39
FAM50A-204ENST00000478509 MROH2AA6NES4 1674 aa23.7■■□□□ 1.39
FAM50A-204ENST00000478509 MIA2Q96PC5 1412 aa23.7■■□□□ 1.38
FAM50A-204ENST00000478509 GGT6Q6P531 493 aa23.7■■□□□ 1.38
FAM50A-204ENST00000478509 PTPN23Q9H3S7 1636 aa23.7■■□□□ 1.38
FAM50A-204ENST00000478509 CNTLNQ9NXG0 1405 aa23.69■■□□□ 1.38
FAM50A-204ENST00000478509 RSPH4AQ5TD94 716 aa23.67■■□□□ 1.38
FAM50A-204ENST00000478509 SETD1BQ9UPS6 1966 aaKnown RBP23.66■■□□□ 1.38
FAM50A-204ENST00000478509 TSPY4P0CV99 314 aa23.66■■□□□ 1.38
FAM50A-204ENST00000478509 TSPY10P0CW01 314 aa23.66■■□□□ 1.38
FAM50A-204ENST00000478509 DHX29Q7Z478 1369 aaKnown RBP23.65■■□□□ 1.38
FAM50A-204ENST00000478509 MAST1Q9Y2H9 1570 aa23.65■■□□□ 1.38
FAM50A-204ENST00000478509 CROCC2H7BZ55 1655 aa23.65■■□□□ 1.38
FAM50A-204ENST00000478509 UHRF1BP1Q6BDS2 1440 aa23.64■■□□□ 1.37
FAM50A-204ENST00000478509 FGD6Q6ZV73 1430 aa23.61■■□□□ 1.37
FAM50A-204ENST00000478509 KIF3BO15066 747 aa23.61■■□□□ 1.37
FAM50A-204ENST00000478509 ZMYM3Q14202 1370 aa23.61■■□□□ 1.37
FAM50A-204ENST00000478509 DNMT1P26358 1616 aaKnown RBP23.57■■□□□ 1.36
FAM50A-204ENST00000478509 TCOF1Q13428 1488 aaKnown RBP23.56■■□□□ 1.36
FAM50A-204ENST00000478509 KDM5DQ9BY66 1539 aa23.55■■□□□ 1.36
FAM50A-204ENST00000478509 ABCC5O15440 1437 aa23.55■■□□□ 1.36
FAM50A-204ENST00000478509 MYO3AQ8NEV4 1616 aa23.55■■□□□ 1.36
FAM50A-204ENST00000478509 DAPK1P53355 1430 aa23.54■■□□□ 1.36
FAM50A-204ENST00000478509 STRCQ7RTU9 1775 aa23.53■■□□□ 1.36
FAM50A-204ENST00000478509 SHANK2Q9UPX8 1470 aa23.53■■□□□ 1.36
FAM50A-204ENST00000478509 RNF17Q9BXT8 1623 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 246 ms