RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 G3V3G9 751 aa10.07□□□□□ -0.8
CCNL1-220ENST00000478454 KIF3CO14782 793 aa10.05□□□□□ -0.8
CCNL1-220ENST00000478454 LARP6Q9BRS8 491 aaKnown RBP10.04□□□□□ -0.8
CCNL1-220ENST00000478454 C2orf72A6NCS6 295 aa10.03□□□□□ -0.8
CCNL1-220ENST00000478454 LHX8Q68G74 356 aa10.03□□□□□ -0.8
CCNL1-220ENST00000478454 C3orf67Q6ZVT6 689 aa10.03□□□□□ -0.8
CCNL1-220ENST00000478454 GPHNQ9NQX3 736 aaPredicted RBP10.03□□□□□ -0.8
CCNL1-220ENST00000478454 OTUD5Q96G74 571 aa10.02□□□□□ -0.81
CCNL1-220ENST00000478454 PDE4AP27815 886 aa10.01□□□□□ -0.81
CCNL1-220ENST00000478454 DSG2Q14126 1118 aa10□□□□□ -0.81
CCNL1-220ENST00000478454 MFSD10Q14728 455 aa10□□□□□ -0.81
CCNL1-220ENST00000478454 EIF2AK3Q9NZJ5 1116 aaKnown RBP10□□□□□ -0.81
CCNL1-220ENST00000478454 TMC2Q8TDI7 906 aa9.99□□□□□ -0.81
CCNL1-220ENST00000478454 FOXK1P85037 733 aa9.97□□□□□ -0.81
CCNL1-220ENST00000478454 DDX27Q96GQ7 796 aaKnown RBP9.97□□□□□ -0.81
CCNL1-220ENST00000478454 MAMSTRQ6ZN01 415 aa9.96□□□□□ -0.82
CCNL1-220ENST00000478454 SCUBE2Q9NQ36 999 aa9.96□□□□□ -0.82
CCNL1-220ENST00000478454 PPP1R15BQ5SWA1 713 aa9.95□□□□□ -0.82
CCNL1-220ENST00000478454 SLAIN1Q8ND83 568 aa9.95□□□□□ -0.82
CCNL1-220ENST00000478454 PLPP6Q8IY26 295 aa9.93□□□□□ -0.82
CCNL1-220ENST00000478454 WDR70Q9NW82 654 aa9.93□□□□□ -0.82
CCNL1-220ENST00000478454 CAMK2BQ13554 666 aa9.9□□□□□ -0.82
CCNL1-220ENST00000478454 KCNV2Q8TDN2 545 aa9.9□□□□□ -0.82
CCNL1-220ENST00000478454 E2F4Q16254 413 aa9.89□□□□□ -0.83
CCNL1-220ENST00000478454 EMILIN3Q9NT22 766 aa9.89□□□□□ -0.83
CCNL1-220ENST00000478454 HOXB3P14651 431 aaPredicted RBP9.86□□□□□ -0.83
CCNL1-220ENST00000478454 SLC34A2O95436 690 aa9.81□□□□□ -0.84
CCNL1-220ENST00000478454 OXER1Q8TDS5 423 aa9.81□□□□□ -0.84
CCNL1-220ENST00000478454 UPF1Q92900 1129 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCNL1-220ENST00000478454 DPYSL4O14531 572 aa9.8□□□□□ -0.84
CCNL1-220ENST00000478454 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
CCNL1-220ENST00000478454 PTCD2Q8WV60 388 aaKnown RBP9.79□□□□□ -0.84
CCNL1-220ENST00000478454 ARHGEF1Q92888 912 aaKnown RBP9.79□□□□□ -0.84
CCNL1-220ENST00000478454 ARIH1Q9Y4X5 557 aaPredicted RBP9.79□□□□□ -0.84
CCNL1-220ENST00000478454 DOK7Q18PE1 504 aa9.76□□□□□ -0.85
CCNL1-220ENST00000478454 KHSRPQ92945 711 aaKnown RBP eCLIP9.76□□□□□ -0.852e-9■■□□□ 13.4
CCNL1-220ENST00000478454 PCDHGA4Q9Y5G9 962 aa9.76□□□□□ -0.85
CCNL1-220ENST00000478454 KDM4FA0A1W2PPD8 638 aa9.74□□□□□ -0.85
CCNL1-220ENST00000478454 MAP3K9P80192 1104 aa9.74□□□□□ -0.85
CCNL1-220ENST00000478454 ARSIQ5FYB1 569 aa9.74□□□□□ -0.85
CCNL1-220ENST00000478454 GPR153Q6NV75 609 aa9.74□□□□□ -0.85
CCNL1-220ENST00000478454 SEMA3EO15041 775 aa9.71□□□□□ -0.86
CCNL1-220ENST00000478454 SNPHO15079 494 aa9.71□□□□□ -0.86
CCNL1-220ENST00000478454 PDIA6Q15084 440 aa9.7□□□□□ -0.86
CCNL1-220ENST00000478454 LCE2DQ5TA82 110 aaPredicted RBP9.7□□□□□ -0.86
CCNL1-220ENST00000478454 ZNF710Q8N1W2 664 aa9.7□□□□□ -0.86
CCNL1-220ENST00000478454 EVI5O60447 810 aa9.69□□□□□ -0.86
CCNL1-220ENST00000478454 NUDT7P0C024 238 aa9.69□□□□□ -0.86
CCNL1-220ENST00000478454 ZSWIM6Q9HCJ5 1215 aa9.69□□□□□ -0.86
CCNL1-220ENST00000478454 ST18O60284 1047 aa9.68□□□□□ -0.86
CCNL1-220ENST00000478454 TBC1D12O60347 775 aa9.68□□□□□ -0.86
CCNL1-220ENST00000478454 ANO8Q9HCE9 1232 aaPredicted RBP9.68□□□□□ -0.86
CCNL1-220ENST00000478454 RIMBP2O15034 1052 aa9.67□□□□□ -0.86
CCNL1-220ENST00000478454 HOXB1P14653 301 aaPredicted RBP9.67□□□□□ -0.86
CCNL1-220ENST00000478454 FAM163AQ96GL9 167 aaPredicted RBP9.67□□□□□ -0.86
CCNL1-220ENST00000478454 MLLT3P42568 568 aaPredicted RBP9.66□□□□□ -0.86
CCNL1-220ENST00000478454 BCANQ96GW7 911 aa9.66□□□□□ -0.86
CCNL1-220ENST00000478454 SPDYE16A6NNV3 312 aaPredicted RBP9.65□□□□□ -0.86
CCNL1-220ENST00000478454 NBR1Q14596 966 aa9.65□□□□□ -0.86
CCNL1-220ENST00000478454 TESPA1A2RU30 521 aaPredicted RBP9.64□□□□□ -0.87
CCNL1-220ENST00000478454 PTGER2P43116 358 aa9.62□□□□□ -0.87
CCNL1-220ENST00000478454 DDX12PQ92771 950 aa9.62□□□□□ -0.87
CCNL1-220ENST00000478454 MARVELD3Q96A59 401 aa9.61□□□□□ -0.87
CCNL1-220ENST00000478454 LHX6Q9UPM6 363 aa9.61□□□□□ -0.87
CCNL1-220ENST00000478454 PRIM1P49642 420 aaKnown RBP9.6□□□□□ -0.87
CCNL1-220ENST00000478454 GRXCR2A6NFK2 248 aa9.59□□□□□ -0.87
CCNL1-220ENST00000478454 PCDHGA10Q9Y5H3 936 aa9.58□□□□□ -0.88
CCNL1-220ENST00000478454 POTEB3A0JP26 581 aa9.57□□□□□ -0.88
CCNL1-220ENST00000478454 POTEBQ6S5H4 581 aa9.57□□□□□ -0.88
CCNL1-220ENST00000478454 ZNF316A6NFI3 1004 aaPredicted RBP9.56□□□□□ -0.88
CCNL1-220ENST00000478454 OSBPP22059 807 aa9.56□□□□□ -0.88
CCNL1-220ENST00000478454 FOSBP53539 338 aa9.56□□□□□ -0.88
CCNL1-220ENST00000478454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCNL1-220ENST00000478454 PHF14O94880 888 aa9.54□□□□□ -0.88
CCNL1-220ENST00000478454 EMP3P54852 163 aa9.54□□□□□ -0.88
CCNL1-220ENST00000478454 RBM26Q5T8P6 1007 aaKnown RBP9.54□□□□□ -0.88
CCNL1-220ENST00000478454 JPH4Q96JJ6 628 aa9.54□□□□□ -0.88
CCNL1-220ENST00000478454 ZNF454Q8N9F8 522 aa9.53□□□□□ -0.88
CCNL1-220ENST00000478454 ERBB3P21860 1342 aa9.52□□□□□ -0.89
CCNL1-220ENST00000478454 FAM205CA6NFA0 338 aa9.51□□□□□ -0.89
CCNL1-220ENST00000478454 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
CCNL1-220ENST00000478454 ADAM33Q9BZ11 813 aa9.5□□□□□ -0.89
CCNL1-220ENST00000478454 TYW1BQ6NUM6 668 aa9.49□□□□□ -0.89
CCNL1-220ENST00000478454 LMOD2Q6P5Q4 547 aa9.49□□□□□ -0.89
CCNL1-220ENST00000478454 ZDHHC16Q969W1 377 aa9.49□□□□□ -0.89
CCNL1-220ENST00000478454 RBM33Q96EV2 1170 aaKnown RBP9.49□□□□□ -0.89
CCNL1-220ENST00000478454 EPAS1Q99814 870 aa9.49□□□□□ -0.89
CCNL1-220ENST00000478454 EN1Q05925 392 aaPredicted RBP9.48□□□□□ -0.89
CCNL1-220ENST00000478454 TSR1Q2NL82 804 aaKnown RBP9.48□□□□□ -0.89
CCNL1-220ENST00000478454 SMYD5Q6GMV2 418 aa9.48□□□□□ -0.89
CCNL1-220ENST00000478454 POTEEQ6S8J3 1075 aa9.48□□□□□ -0.89
CCNL1-220ENST00000478454 HS3ST6Q96QI5 342 aa9.48□□□□□ -0.89
CCNL1-220ENST00000478454 CDHR5Q9HBB8 845 aa9.47□□□□□ -0.89
CCNL1-220ENST00000478454 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.9
CCNL1-220ENST00000478454 FBXW7Q969H0 707 aa9.46□□□□□ -0.9
CCNL1-220ENST00000478454 PSDA5PKW4 1024 aaPredicted RBP9.45□□□□□ -0.9
CCNL1-220ENST00000478454 MAP3K7O43318 606 aa9.44□□□□□ -0.9
CCNL1-220ENST00000478454 BCL2L12Q9HB09 334 aa9.44□□□□□ -0.9
CCNL1-220ENST00000478454 GPR37O15354 613 aa9.43□□□□□ -0.9
CCNL1-220ENST00000478454 C6orf132Q5T0Z8 1188 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms