RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 WDR43Q15061 677 aaKnown RBP eCLIP15.99■□□□□ 0.155e-9■■■■■ 55.5
SGSM3-209ENST00000478085 DAXXQ9UER7 740 aaPredicted RBP15.98■□□□□ 0.15
SGSM3-209ENST00000478085 SAFB2Q14151 953 aaKnown RBP eCLIP15.97■□□□□ 0.15
SGSM3-209ENST00000478085 FGD6Q6ZV73 1430 aa15.97■□□□□ 0.15
SGSM3-209ENST00000478085 POGKQ9P215 609 aa15.96■□□□□ 0.15
SGSM3-209ENST00000478085 KNSTRNQ9Y448 316 aa15.96■□□□□ 0.15
SGSM3-209ENST00000478085 C14orf37Q86TY3 774 aa15.95■□□□□ 0.14
SGSM3-209ENST00000478085 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
SGSM3-209ENST00000478085 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
SGSM3-209ENST00000478085 MYOM3Q5VTT5 1437 aa15.94■□□□□ 0.14
SGSM3-209ENST00000478085 WASHC2CQ9Y4E1 1318 aa15.94■□□□□ 0.14
SGSM3-209ENST00000478085 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
SGSM3-209ENST00000478085 NUTM2DQ5VT03 806 aaPredicted RBP15.92■□□□□ 0.14
SGSM3-209ENST00000478085 STK26Q9P289 416 aa15.92■□□□□ 0.14
SGSM3-209ENST00000478085 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
SGSM3-209ENST00000478085 TNNT2P45379 298 aaPredicted RBP15.91■□□□□ 0.14
SGSM3-209ENST00000478085 IRX6P78412 446 aaPredicted RBP15.91■□□□□ 0.14
SGSM3-209ENST00000478085 AFAP1Q8N556 730 aa15.91■□□□□ 0.14
SGSM3-209ENST00000478085 CC2D1BQ5T0F9 858 aaKnown RBP15.91■□□□□ 0.14
SGSM3-209ENST00000478085 FAM69CQ0P6D2 419 aa15.9■□□□□ 0.14
SGSM3-209ENST00000478085 PPM1GO15355 546 aaPredicted RBP15.89■□□□□ 0.14
SGSM3-209ENST00000478085 TMF1P82094 1093 aa15.89■□□□□ 0.13
SGSM3-209ENST00000478085 FYCO1Q9BQS8 1478 aa15.87■□□□□ 0.13
SGSM3-209ENST00000478085 KIAA0586Q9BVV6 1533 aa15.86■□□□□ 0.13
SGSM3-209ENST00000478085 ZBTB7CA1YPR0 619 aa15.86■□□□□ 0.13
SGSM3-209ENST00000478085 ROCK2O75116 1388 aaKnown RBP15.84■□□□□ 0.13
SGSM3-209ENST00000478085 SRPK2P78362 688 aaKnown RBP15.83■□□□□ 0.12
SGSM3-209ENST00000478085 EFCAB5A4FU69 1503 aa15.82■□□□□ 0.12
SGSM3-209ENST00000478085 KIF15Q9NS87 1388 aa15.82■□□□□ 0.12
SGSM3-209ENST00000478085 SYNJ2O15056 1496 aa15.81■□□□□ 0.12
SGSM3-209ENST00000478085 NEUROD2Q15784 382 aa15.81■□□□□ 0.12
SGSM3-209ENST00000478085 ZBTB47Q9UFB7 747 aaPredicted RBP15.8■□□□□ 0.12
SGSM3-209ENST00000478085 HDGFP51858 240 aaKnown RBP15.79■□□□□ 0.12
SGSM3-209ENST00000478085 RRBP1Q9P2E9 1410 aaKnown RBP15.79■□□□□ 0.12
SGSM3-209ENST00000478085 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
SGSM3-209ENST00000478085 LMOD2Q6P5Q4 547 aa15.78■□□□□ 0.12
SGSM3-209ENST00000478085 ST20-MTHFSA0A0A6YYL1 179 aa15.78■□□□□ 0.12
SGSM3-209ENST00000478085 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
SGSM3-209ENST00000478085 CCDC144AA2RUR9 1427 aa15.77■□□□□ 0.11
SGSM3-209ENST00000478085 CDK13Q14004 1512 aaKnown RBP15.77■□□□□ 0.11
SGSM3-209ENST00000478085 PLB1Q6P1J6 1458 aa15.76■□□□□ 0.11
SGSM3-209ENST00000478085 TROQ12816 1431 aaPredicted RBP15.76■□□□□ 0.11
SGSM3-209ENST00000478085 ANKRD50Q9ULJ7 1429 aa15.76■□□□□ 0.11
SGSM3-209ENST00000478085 CFAP53Q96M91 514 aa15.76■□□□□ 0.11
SGSM3-209ENST00000478085 IQGAP2Q13576 1575 aa15.75■□□□□ 0.11
SGSM3-209ENST00000478085 TRAK1Q9UPV9 953 aa15.75■□□□□ 0.11
SGSM3-209ENST00000478085 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
SGSM3-209ENST00000478085 SOX12O15370 315 aa15.74■□□□□ 0.11
SGSM3-209ENST00000478085 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
SGSM3-209ENST00000478085 TIAM1Q13009 1591 aa15.74■□□□□ 0.11
SGSM3-209ENST00000478085 EPRSP07814 1512 aaKnown RBP15.73■□□□□ 0.11
SGSM3-209ENST00000478085 UACAQ9BZF9 1416 aa15.72■□□□□ 0.11
SGSM3-209ENST00000478085 MAGI1Q96QZ7 1491 aaPredicted RBP15.72■□□□□ 0.11
SGSM3-209ENST00000478085 ARHGAP5Q13017 1502 aa15.7■□□□□ 0.1
SGSM3-209ENST00000478085 U2SURPO15042 1029 aaKnown RBP15.7■□□□□ 0.1
SGSM3-209ENST00000478085 RAPGEF3O95398 923 aa15.7■□□□□ 0.1
SGSM3-209ENST00000478085 CUL7Q14999 1698 aa15.69■□□□□ 0.1
SGSM3-209ENST00000478085 MORC1Q86VD1 984 aa15.68■□□□□ 0.1
SGSM3-209ENST00000478085 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.67■□□□□ 0.1
SGSM3-209ENST00000478085 CCER2I3L3R5 266 aa15.67■□□□□ 0.1
SGSM3-209ENST00000478085 NUTM2FA1L443 756 aa15.67■□□□□ 0.1
SGSM3-209ENST00000478085 PCF11O94913 1555 aaKnown RBP15.66■□□□□ 0.1
SGSM3-209ENST00000478085 MIA2Q96PC5 1412 aa15.66■□□□□ 0.1
SGSM3-209ENST00000478085 SCAPERQ9BY12 1400 aa15.65■□□□□ 0.1
SGSM3-209ENST00000478085 EHBP1L1Q8N3D4 1523 aa15.65■□□□□ 0.1
SGSM3-209ENST00000478085 NUDCQ9Y266 331 aa15.65■□□□□ 0.1
SGSM3-209ENST00000478085 NPM2Q86SE8 214 aaKnown RBP15.65■□□□□ 0.1
SGSM3-209ENST00000478085 A0A0G2JS52 829 aa15.64■□□□□ 0.09
SGSM3-209ENST00000478085 HAP1P54257 671 aaPredicted RBP15.64■□□□□ 0.09
SGSM3-209ENST00000478085 HECW1Q76N89 1606 aa15.63■□□□□ 0.09
SGSM3-209ENST00000478085 VGFO15240 615 aaPredicted RBP15.63■□□□□ 0.09
SGSM3-209ENST00000478085 LAS1LQ9Y4W2 734 aaKnown RBP15.63■□□□□ 0.09
SGSM3-209ENST00000478085 C9orf84Q5VXU9 1444 aa15.62■□□□□ 0.09
SGSM3-209ENST00000478085 ARHGEF11O15085 1522 aa15.62■□□□□ 0.09
SGSM3-209ENST00000478085 EID1Q9Y6B2 187 aa15.61■□□□□ 0.09
SGSM3-209ENST00000478085 MAPK8IP3Q9UPT6 1336 aa15.61■□□□□ 0.09
SGSM3-209ENST00000478085 KTN1Q86UP2 1357 aaKnown RBP15.61■□□□□ 0.09
SGSM3-209ENST00000478085 USP47Q96K76 1375 aa15.61■□□□□ 0.09
SGSM3-209ENST00000478085 HFM1A2PYH4 1435 aa15.6■□□□□ 0.09
SGSM3-209ENST00000478085 HDGFL2Q7Z4V5 671 aaPredicted RBP15.59■□□□□ 0.09
SGSM3-209ENST00000478085 PANK3Q9H999 370 aa15.59■□□□□ 0.09
SGSM3-209ENST00000478085 DAPK1P53355 1430 aa15.58■□□□□ 0.08
SGSM3-209ENST00000478085 NAIPQ13075 1403 aa15.57■□□□□ 0.08
SGSM3-209ENST00000478085 PAK3O75914 559 aaPredicted RBP15.56■□□□□ 0.08
SGSM3-209ENST00000478085 TMEM132EQ6IEE7 984 aa15.56■□□□□ 0.08
SGSM3-209ENST00000478085 EIF3AQ14152 1382 aaKnown RBP15.56■□□□□ 0.08
SGSM3-209ENST00000478085 RALBP1Q15311 655 aa15.55■□□□□ 0.08
SGSM3-209ENST00000478085 NBPF8Q3BBV2 869 aa15.55■□□□□ 0.08
SGSM3-209ENST00000478085 NBPF1Q3BBV0 1214 aa15.54■□□□□ 0.08
SGSM3-209ENST00000478085 MINK1Q8N4C8 1332 aaPredicted RBP15.54■□□□□ 0.08
SGSM3-209ENST00000478085 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
SGSM3-209ENST00000478085 SUPT6HQ7KZ85 1726 aaKnown RBP15.53■□□□□ 0.08
SGSM3-209ENST00000478085 U2AF1L5P0DN76 240 aaPredicted RBP15.53■□□□□ 0.08
SGSM3-209ENST00000478085 U2AF1Q01081 240 aaKnown RBP eCLIP15.53■□□□□ 0.08
SGSM3-209ENST00000478085 CFAP70Q5T0N1 1121 aa15.53■□□□□ 0.08
SGSM3-209ENST00000478085 FRAT1Q92837 279 aaPredicted RBP15.53■□□□□ 0.08
SGSM3-209ENST00000478085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.53■□□□□ 0.08
SGSM3-209ENST00000478085 PRKRIP1Q9H875 184 aaPredicted RBP15.53■□□□□ 0.08
SGSM3-209ENST00000478085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.52■□□□□ 0.08
SGSM3-209ENST00000478085 TERF2IPQ9NYB0 399 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms