RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 CHGAP10645 457 aaKnown RBP16.66■□□□□ 0.26
SGSM3-209ENST00000478085 VPS8Q8N3P4 1428 aa16.64■□□□□ 0.25
SGSM3-209ENST00000478085 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
SGSM3-209ENST00000478085 ANP32CO43423 234 aa16.62■□□□□ 0.25
SGSM3-209ENST00000478085 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
SGSM3-209ENST00000478085 HIRIP3Q9BW71 556 aaPredicted RBP16.61■□□□□ 0.25
SGSM3-209ENST00000478085 BCANQ96GW7 911 aa16.6■□□□□ 0.25
SGSM3-209ENST00000478085 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
SGSM3-209ENST00000478085 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
SGSM3-209ENST00000478085 ESF1Q9H501 851 aaKnown RBP16.58■□□□□ 0.24
SGSM3-209ENST00000478085 NESP48681 1621 aa16.57■□□□□ 0.24
SGSM3-209ENST00000478085 IGF1RP08069 1367 aa16.56■□□□□ 0.24
SGSM3-209ENST00000478085 DDX10Q13206 875 aaKnown RBP16.56■□□□□ 0.24
SGSM3-209ENST00000478085 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
SGSM3-209ENST00000478085 CCNB3Q8WWL7 1395 aa16.55■□□□□ 0.24
SGSM3-209ENST00000478085 CC2D2AQ9P2K1 1620 aa16.54■□□□□ 0.24
SGSM3-209ENST00000478085 JPH4Q96JJ6 628 aa16.54■□□□□ 0.24
SGSM3-209ENST00000478085 FHOD3Q2V2M9 1422 aa16.53■□□□□ 0.24
SGSM3-209ENST00000478085 CFTRP13569 1480 aa16.52■□□□□ 0.24
SGSM3-209ENST00000478085 ACIN1Q9UKV3 1341 aaKnown RBP16.51■□□□□ 0.23
SGSM3-209ENST00000478085 SIN3AQ96ST3 1273 aa16.51■□□□□ 0.23
SGSM3-209ENST00000478085 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
SGSM3-209ENST00000478085 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
SGSM3-209ENST00000478085 RGL3Q3MIN7 710 aa16.48■□□□□ 0.23
SGSM3-209ENST00000478085 CARMIL2Q6F5E8 1435 aa16.46■□□□□ 0.23
SGSM3-209ENST00000478085 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
SGSM3-209ENST00000478085 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.226e-7■■■■□ 22.4
SGSM3-209ENST00000478085 FMN1Q68DA7 1419 aa16.44■□□□□ 0.22
SGSM3-209ENST00000478085 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
SGSM3-209ENST00000478085 GAPVD1Q14C86 1478 aa16.43■□□□□ 0.22
SGSM3-209ENST00000478085 HMGXB3Q12766 1538 aa16.41■□□□□ 0.22
SGSM3-209ENST00000478085 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
SGSM3-209ENST00000478085 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
SGSM3-209ENST00000478085 UNC13AQ9UPW8 1703 aa16.35■□□□□ 0.21
SGSM3-209ENST00000478085 MIER1Q8N108 512 aa16.34■□□□□ 0.21
SGSM3-209ENST00000478085 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.2
SGSM3-209ENST00000478085 FOXD1Q16676 465 aa16.33■□□□□ 0.2
SGSM3-209ENST00000478085 ERICH6Q7L0X2 663 aa16.31■□□□□ 0.2
SGSM3-209ENST00000478085 CUX1P39880 1505 aa16.31■□□□□ 0.2
SGSM3-209ENST00000478085 ARID4BQ4LE39 1312 aaPredicted RBP16.29■□□□□ 0.2
SGSM3-209ENST00000478085 SETD5Q9C0A6 1442 aa16.28■□□□□ 0.2
SGSM3-209ENST00000478085 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.2
SGSM3-209ENST00000478085 FAM9BQ8IZU0 186 aa16.28■□□□□ 0.2
SGSM3-209ENST00000478085 TOPBP1Q92547 1522 aa16.27■□□□□ 0.2
SGSM3-209ENST00000478085 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
SGSM3-209ENST00000478085 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
SGSM3-209ENST00000478085 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
SGSM3-209ENST00000478085 EFCAB2Q5VUJ9 269 aa16.25■□□□□ 0.19
SGSM3-209ENST00000478085 PTPRGP23470 1445 aa16.25■□□□□ 0.19
SGSM3-209ENST00000478085 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
SGSM3-209ENST00000478085 CLSPNQ9HAW4 1339 aa16.23■□□□□ 0.19
SGSM3-209ENST00000478085 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
SGSM3-209ENST00000478085 HNRNPUQ00839 825 aaKnown RBP eCLIP16.22■□□□□ 0.19
SGSM3-209ENST00000478085 PKD2Q13563 968 aa16.22■□□□□ 0.19
SGSM3-209ENST00000478085 CYB5RLQ6IPT4 315 aa16.22■□□□□ 0.19
SGSM3-209ENST00000478085 GGT6Q6P531 493 aa16.22■□□□□ 0.19
SGSM3-209ENST00000478085 MLECQ14165 292 aa16.21■□□□□ 0.19
SGSM3-209ENST00000478085 TOP2BQ02880 1626 aa16.21■□□□□ 0.19
SGSM3-209ENST00000478085 CARD11Q9BXL7 1154 aa16.2■□□□□ 0.18
SGSM3-209ENST00000478085 DCAF11Q8TEB1 546 aa16.19■□□□□ 0.18
SGSM3-209ENST00000478085 MPHOSPH9Q99550 1183 aa16.19■□□□□ 0.18
SGSM3-209ENST00000478085 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
SGSM3-209ENST00000478085 PRXQ9BXM0 1461 aa16.18■□□□□ 0.18
SGSM3-209ENST00000478085 TMC1Q8TDI8 760 aa16.18■□□□□ 0.18
SGSM3-209ENST00000478085 PEG3Q9GZU2 1588 aa16.18■□□□□ 0.18
SGSM3-209ENST00000478085 GRIN2BQ13224 1484 aa16.18■□□□□ 0.18
SGSM3-209ENST00000478085 PPP1R15AO75807 674 aaPredicted RBP16.17■□□□□ 0.18
SGSM3-209ENST00000478085 KIF21BO75037 1637 aa16.17■□□□□ 0.18
SGSM3-209ENST00000478085 MRS2Q9HD23 443 aa16.17■□□□□ 0.18
SGSM3-209ENST00000478085 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
SGSM3-209ENST00000478085 NUP155O75694 1391 aa16.14■□□□□ 0.17
SGSM3-209ENST00000478085 CCDC18Q5T9S5 1454 aa16.14■□□□□ 0.17
SGSM3-209ENST00000478085 ZNF644Q9H582 1327 aaPredicted RBP16.13■□□□□ 0.17
SGSM3-209ENST00000478085 SLC24A1O60721 1099 aa16.13■□□□□ 0.17
SGSM3-209ENST00000478085 SENP3-EIF4A1A0A087X0R7 540 aa16.12■□□□□ 0.17
SGSM3-209ENST00000478085 KIF3BO15066 747 aa16.11■□□□□ 0.17
SGSM3-209ENST00000478085 ANKRD30AQ9BXX3 1397 aa16.11■□□□□ 0.17
SGSM3-209ENST00000478085 NEFMP07197 916 aa16.1■□□□□ 0.17
SGSM3-209ENST00000478085 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.17
SGSM3-209ENST00000478085 IFT140Q96RY7 1462 aa16.08■□□□□ 0.16
SGSM3-209ENST00000478085 SPAG9O60271 1321 aaKnown RBP16.08■□□□□ 0.16
SGSM3-209ENST00000478085 TIMELESSQ9UNS1 1208 aa16.08■□□□□ 0.16
SGSM3-209ENST00000478085 PHLDB1Q86UU1 1377 aa16.07■□□□□ 0.16
SGSM3-209ENST00000478085 ERICH3Q5RHP9 1530 aa16.07■□□□□ 0.16
SGSM3-209ENST00000478085 LAMC3Q9Y6N6 1575 aa16.05■□□□□ 0.16
SGSM3-209ENST00000478085 RSPH4AQ5TD94 716 aa16.04■□□□□ 0.16
SGSM3-209ENST00000478085 KANK1Q14678 1352 aa16.04■□□□□ 0.16
SGSM3-209ENST00000478085 L3MBTL2Q969R5 705 aa16.04■□□□□ 0.16
SGSM3-209ENST00000478085 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
SGSM3-209ENST00000478085 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.16
SGSM3-209ENST00000478085 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.16
SGSM3-209ENST00000478085 BCL11AQ9H165 835 aa16.02■□□□□ 0.16
SGSM3-209ENST00000478085 FKBP8Q14318 412 aa16.02■□□□□ 0.15
SGSM3-209ENST00000478085 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
SGSM3-209ENST00000478085 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
SGSM3-209ENST00000478085 URB2Q14146 1524 aaKnown RBP16.01■□□□□ 0.15
SGSM3-209ENST00000478085 PRG4Q92954 1404 aaPredicted RBP16.01■□□□□ 0.15
SGSM3-209ENST00000478085 HSPA5P11021 654 aaKnown RBP16■□□□□ 0.15
SGSM3-209ENST00000478085 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
SGSM3-209ENST00000478085 CASKIN1Q8WXD9 1431 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 229.5 ms