RNA–Protein interactions for RNA: ENST00000477578.5

ZC3HC1-207, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2

Gene ZC3HC1, Length 850 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-207ENST00000477578 CDC42BPAQ5VT25 1732 aa15.34■□□□□ 0.05
ZC3HC1-207ENST00000477578 PREX2Q70Z35 1606 aa15.33■□□□□ 0.04
ZC3HC1-207ENST00000477578 ADGRL1O94910 1474 aa15.33■□□□□ 0.04
ZC3HC1-207ENST00000477578 ARHGAP5Q13017 1502 aa15.33■□□□□ 0.04
ZC3HC1-207ENST00000477578 KDM4FA0A1W2PPD8 638 aa15.32■□□□□ 0.04
ZC3HC1-207ENST00000477578 MTUS2Q5JR59 1369 aa15.32■□□□□ 0.04
ZC3HC1-207ENST00000477578 SCAPERQ9BY12 1400 aa15.32■□□□□ 0.04
ZC3HC1-207ENST00000477578 TIAM1Q13009 1591 aa15.29■□□□□ 0.04
ZC3HC1-207ENST00000477578 EHBP1L1Q8N3D4 1523 aa15.28■□□□□ 0.04
ZC3HC1-207ENST00000477578 GPATCH8Q9UKJ3 1502 aaKnown RBP15.28■□□□□ 0.04
ZC3HC1-207ENST00000477578 POGZQ7Z3K3 1410 aa15.27■□□□□ 0.04
ZC3HC1-207ENST00000477578 ZMYM4Q5VZL5 1548 aa15.27■□□□□ 0.03
ZC3HC1-207ENST00000477578 ARHGEF12Q9NZN5 1544 aa15.25■□□□□ 0.03
ZC3HC1-207ENST00000477578 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
ZC3HC1-207ENST00000477578 ABCC1P33527 1531 aa15.24■□□□□ 0.03
ZC3HC1-207ENST00000477578 ITSN2Q9NZM3 1697 aa15.24■□□□□ 0.03
ZC3HC1-207ENST00000477578 SAMD9LQ8IVG5 1584 aa15.24■□□□□ 0.03
ZC3HC1-207ENST00000477578 ARHGEF40Q8TER5 1519 aa15.23■□□□□ 0.03
ZC3HC1-207ENST00000477578 AFAP1Q8N556 730 aa15.23■□□□□ 0.03
ZC3HC1-207ENST00000477578 ZNF777Q9ULD5 760 aaPredicted RBP15.23■□□□□ 0.03
ZC3HC1-207ENST00000477578 YEATS2Q9ULM3 1422 aa15.23■□□□□ 0.03
ZC3HC1-207ENST00000477578 SUPT6HQ7KZ85 1726 aaKnown RBP15.23■□□□□ 0.03
ZC3HC1-207ENST00000477578 MAP3K1Q13233 1512 aa15.22■□□□□ 0.03
ZC3HC1-207ENST00000477578 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
ZC3HC1-207ENST00000477578 MAGI2Q86UL8 1455 aa15.22■□□□□ 0.03
ZC3HC1-207ENST00000477578 ZNF518AQ6AHZ1 1483 aa15.21■□□□□ 0.03
ZC3HC1-207ENST00000477578 LRRC9Q6ZRR7 1453 aa15.21■□□□□ 0.03
ZC3HC1-207ENST00000477578 KDM5CP41229 1560 aa15.21■□□□□ 0.03
ZC3HC1-207ENST00000477578 TRAPPC8Q9Y2L5 1435 aa15.21■□□□□ 0.03
ZC3HC1-207ENST00000477578 KANK4Q5T7N3 995 aaPredicted RBP15.21■□□□□ 0.03
ZC3HC1-207ENST00000477578 CFDP1Q9UEE9 299 aaPredicted RBP15.21■□□□□ 0.03
ZC3HC1-207ENST00000477578 NCOA2Q15596 1464 aa15.2■□□□□ 0.02
ZC3HC1-207ENST00000477578 SIGLEC1Q9BZZ2 1709 aa15.2■□□□□ 0.02
ZC3HC1-207ENST00000477578 SYCP2Q9BX26 1530 aa15.18■□□□□ 0.02
ZC3HC1-207ENST00000477578 HECW2Q9P2P5 1572 aa15.17■□□□□ 0.02
ZC3HC1-207ENST00000477578 HNRNPMP52272 730 aaKnown RBP eCLIP15.17■□□□□ 0.02
ZC3HC1-207ENST00000477578 BCORL1Q5H9F3 1711 aa15.17■□□□□ 0.02
ZC3HC1-207ENST00000477578 ZNF644Q9H582 1327 aaPredicted RBP15.17■□□□□ 0.02
ZC3HC1-207ENST00000477578 MLH3Q9UHC1 1453 aa15.16■□□□□ 0.02
ZC3HC1-207ENST00000477578 KIAA1107Q9UPP5 1409 aa15.16■□□□□ 0.02
ZC3HC1-207ENST00000477578 ARID4BQ4LE39 1312 aaPredicted RBP15.16■□□□□ 0.02
ZC3HC1-207ENST00000477578 ADAMTSL3P82987 1691 aa15.16■□□□□ 0.02
ZC3HC1-207ENST00000477578 ATP10AO60312 1499 aa15.15■□□□□ 0.02
ZC3HC1-207ENST00000477578 KIDINS220Q9ULH0 1771 aa15.15■□□□□ 0.02
ZC3HC1-207ENST00000477578 PLEKHH2Q8IVE3 1493 aa15.14■□□□□ 0.01
ZC3HC1-207ENST00000477578 APLP2Q06481 763 aa15.14■□□□□ 0.01
ZC3HC1-207ENST00000477578 MYT1LQ9UL68 1186 aa15.14■□□□□ 0.01
ZC3HC1-207ENST00000477578 DIP2CQ9Y2E4 1556 aa15.14■□□□□ 0.01
ZC3HC1-207ENST00000477578 ABCA6Q8N139 1617 aa15.14■□□□□ 0.01
ZC3HC1-207ENST00000477578 C9orf84Q5VXU9 1444 aa15.12■□□□□ 0.01
ZC3HC1-207ENST00000477578 MBD5Q9P267 1494 aa15.11■□□□□ 0.01
ZC3HC1-207ENST00000477578 MADDQ8WXG6 1647 aa15.1■□□□□ 0.01
ZC3HC1-207ENST00000477578 SPAG9O60271 1321 aaKnown RBP15.1■□□□□ 0.01
ZC3HC1-207ENST00000477578 CAMSAP2Q08AD1 1489 aa15.09■□□□□ 0.01
ZC3HC1-207ENST00000477578 REREQ9P2R6 1566 aa15.09■□□□□ 0.01
ZC3HC1-207ENST00000477578 INO80Q9ULG1 1556 aaPredicted RBP15.08■□□□□ 0
ZC3HC1-207ENST00000477578 MLECQ14165 292 aa15.08■□□□□ 0
ZC3HC1-207ENST00000477578 MYOM3Q5VTT5 1437 aa15.08■□□□□ 0
ZC3HC1-207ENST00000477578 ATP7AQ04656 1500 aa15.07■□□□□ 0
ZC3HC1-207ENST00000477578 RIMS1Q86UR5 1692 aaKnown RBP15.07■□□□□ 0
ZC3HC1-207ENST00000477578 PTPRMP28827 1452 aa15.07■□□□□ 0
ZC3HC1-207ENST00000477578 MIA2Q96PC5 1412 aa15.05■□□□□ -0
ZC3HC1-207ENST00000477578 FER1L4A9Z1Z3 1794 aa15.04■□□□□ -0
ZC3HC1-207ENST00000477578 AGLP35573 1532 aa15.04■□□□□ -0
ZC3HC1-207ENST00000477578 ARHGEF5Q12774 1597 aa15.03■□□□□ -0
ZC3HC1-207ENST00000477578 CCDC141Q6ZP82 1450 aa15.03■□□□□ -0
ZC3HC1-207ENST00000477578 RSPH4AQ5TD94 716 aa15.03■□□□□ -0
ZC3HC1-207ENST00000477578 RTEL1-TNFRSF6BF6WH68 1400 aa15.01□□□□□ -0.01
ZC3HC1-207ENST00000477578 ADGBQ8N7X0 1667 aa15□□□□□ -0.01
ZC3HC1-207ENST00000477578 A2MP01023 1474 aa15□□□□□ -0.01
ZC3HC1-207ENST00000477578 PTPN23Q9H3S7 1636 aa14.99□□□□□ -0.01
ZC3HC1-207ENST00000477578 PLXNC1O60486 1568 aa14.99□□□□□ -0.01
ZC3HC1-207ENST00000477578 FGD6Q6ZV73 1430 aa14.98□□□□□ -0.01
ZC3HC1-207ENST00000477578 TSPY4P0CV99 314 aa14.97□□□□□ -0.01
ZC3HC1-207ENST00000477578 TSPY10P0CW01 314 aa14.97□□□□□ -0.01
ZC3HC1-207ENST00000477578 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
ZC3HC1-207ENST00000477578 MAST1Q9Y2H9 1570 aa14.96□□□□□ -0.01
ZC3HC1-207ENST00000477578 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
ZC3HC1-207ENST00000477578 DHX29Q7Z478 1369 aaKnown RBP14.95□□□□□ -0.02
ZC3HC1-207ENST00000477578 CEBPAP49715 358 aaPredicted RBP14.94□□□□□ -0.02
ZC3HC1-207ENST00000477578 FOXD1Q16676 465 aa14.94□□□□□ -0.02
ZC3HC1-207ENST00000477578 PPARGC1BQ86YN6 1023 aaKnown RBP14.93□□□□□ -0.02
ZC3HC1-207ENST00000477578 CROCC2H7BZ55 1655 aa14.93□□□□□ -0.02
ZC3HC1-207ENST00000477578 ABCC5O15440 1437 aa14.92□□□□□ -0.02
ZC3HC1-207ENST00000477578 DNMT1P26358 1616 aaKnown RBP14.92□□□□□ -0.02
ZC3HC1-207ENST00000477578 C3P01024 1663 aa14.92□□□□□ -0.02
ZC3HC1-207ENST00000477578 GGT6Q6P531 493 aa14.91□□□□□ -0.02
ZC3HC1-207ENST00000477578 DAPK1P53355 1430 aa14.91□□□□□ -0.02
ZC3HC1-207ENST00000477578 ESF1Q9H501 851 aaKnown RBP14.9□□□□□ -0.02
ZC3HC1-207ENST00000477578 CLTCQ00610 1675 aaKnown RBP14.9□□□□□ -0.02
ZC3HC1-207ENST00000477578 KIF3BO15066 747 aa14.89□□□□□ -0.03
ZC3HC1-207ENST00000477578 SHANK2Q9UPX8 1470 aa14.89□□□□□ -0.03
ZC3HC1-207ENST00000477578 MROH2AA6NES4 1674 aa14.88□□□□□ -0.03
ZC3HC1-207ENST00000477578 SETD1BQ9UPS6 1966 aaKnown RBP14.88□□□□□ -0.03
ZC3HC1-207ENST00000477578 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
ZC3HC1-207ENST00000477578 FAM50AQ14320 339 aaKnown RBP14.87□□□□□ -0.03
ZC3HC1-207ENST00000477578 LMTK3Q96Q04 1460 aa14.87□□□□□ -0.03
ZC3HC1-207ENST00000477578 PPP6R1Q9UPN7 881 aa14.86□□□□□ -0.03
ZC3HC1-207ENST00000477578 ZMYM3Q14202 1370 aa14.85□□□□□ -0.03
ZC3HC1-207ENST00000477578 CHIC2Q9UKJ5 165 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms