RNA–Protein interactions for RNA: ENST00000477578.5

ZC3HC1-207, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2

Gene ZC3HC1, Length 850 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-207ENST00000477578 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
ZC3HC1-207ENST00000477578 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
ZC3HC1-207ENST00000477578 ABCC9O60706 1549 aa20.58■□□□□ 0.88
ZC3HC1-207ENST00000477578 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
ZC3HC1-207ENST00000477578 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
ZC3HC1-207ENST00000477578 NACADO15069 1562 aa19.7■□□□□ 0.74
ZC3HC1-207ENST00000477578 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
ZC3HC1-207ENST00000477578 MYO15BQ96JP2 1530 aa19.56■□□□□ 0.72
ZC3HC1-207ENST00000477578 DCAF1Q9Y4B6 1507 aa19.46■□□□□ 0.71
ZC3HC1-207ENST00000477578 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
ZC3HC1-207ENST00000477578 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
ZC3HC1-207ENST00000477578 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
ZC3HC1-207ENST00000477578 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
ZC3HC1-207ENST00000477578 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
ZC3HC1-207ENST00000477578 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
ZC3HC1-207ENST00000477578 AEBP2Q6ZN18 517 aaPredicted RBP18.75■□□□□ 0.59
ZC3HC1-207ENST00000477578 EIF4G1Q04637 1599 aaKnown RBP18.66■□□□□ 0.58
ZC3HC1-207ENST00000477578 CC2D2AQ9P2K1 1620 aa18.61■□□□□ 0.57
ZC3HC1-207ENST00000477578 CECR2Q9BXF3 1484 aa18.47■□□□□ 0.55
ZC3HC1-207ENST00000477578 SMARCA4P51532 1647 aa18.28■□□□□ 0.52
ZC3HC1-207ENST00000477578 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
ZC3HC1-207ENST00000477578 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
ZC3HC1-207ENST00000477578 NCAPD3P42695 1498 aa18.19■□□□□ 0.5
ZC3HC1-207ENST00000477578 MROH2BQ7Z745 1585 aa18.16■□□□□ 0.5
ZC3HC1-207ENST00000477578 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
ZC3HC1-207ENST00000477578 PEG3Q9GZU2 1588 aa18.1■□□□□ 0.49
ZC3HC1-207ENST00000477578 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
ZC3HC1-207ENST00000477578 BAZ1BQ9UIG0 1483 aaKnown RBP18.02■□□□□ 0.48
ZC3HC1-207ENST00000477578 WIZO95785 1651 aa17.97■□□□□ 0.47
ZC3HC1-207ENST00000477578 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
ZC3HC1-207ENST00000477578 NESP48681 1621 aa17.8■□□□□ 0.44
ZC3HC1-207ENST00000477578 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
ZC3HC1-207ENST00000477578 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
ZC3HC1-207ENST00000477578 ERCC6Q03468 1493 aa17.69■□□□□ 0.42
ZC3HC1-207ENST00000477578 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
ZC3HC1-207ENST00000477578 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
ZC3HC1-207ENST00000477578 KIF21AQ7Z4S6 1674 aa17.6■□□□□ 0.41
ZC3HC1-207ENST00000477578 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.41
ZC3HC1-207ENST00000477578 CCDC88BA6NC98 1476 aa17.55■□□□□ 0.4
ZC3HC1-207ENST00000477578 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
ZC3HC1-207ENST00000477578 CUX2O14529 1486 aa17.53■□□□□ 0.4
ZC3HC1-207ENST00000477578 CFTRP13569 1480 aa17.53■□□□□ 0.4
ZC3HC1-207ENST00000477578 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
ZC3HC1-207ENST00000477578 PRDM2Q13029 1718 aa17.43■□□□□ 0.38
ZC3HC1-207ENST00000477578 CEP164Q9UPV0 1460 aa17.43■□□□□ 0.38
ZC3HC1-207ENST00000477578 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
ZC3HC1-207ENST00000477578 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
ZC3HC1-207ENST00000477578 WDR62O43379 1518 aa17.37■□□□□ 0.37
ZC3HC1-207ENST00000477578 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
ZC3HC1-207ENST00000477578 TOPBP1Q92547 1522 aa17.17■□□□□ 0.34
ZC3HC1-207ENST00000477578 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
ZC3HC1-207ENST00000477578 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
ZC3HC1-207ENST00000477578 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
ZC3HC1-207ENST00000477578 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
ZC3HC1-207ENST00000477578 CUX1P39880 1505 aa17.03■□□□□ 0.32
ZC3HC1-207ENST00000477578 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.32
ZC3HC1-207ENST00000477578 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
ZC3HC1-207ENST00000477578 TARBP1Q13395 1621 aaKnown RBP17■□□□□ 0.31
ZC3HC1-207ENST00000477578 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
ZC3HC1-207ENST00000477578 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
ZC3HC1-207ENST00000477578 SOGA1O94964 1423 aa16.95■□□□□ 0.3
ZC3HC1-207ENST00000477578 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
ZC3HC1-207ENST00000477578 AQRO60306 1485 aaKnown RBP eCLIP16.92■□□□□ 0.33e-6■■■□□ 16.9
ZC3HC1-207ENST00000477578 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
ZC3HC1-207ENST00000477578 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
ZC3HC1-207ENST00000477578 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
ZC3HC1-207ENST00000477578 SYNJ1O43426 1573 aa16.86■□□□□ 0.29
ZC3HC1-207ENST00000477578 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
ZC3HC1-207ENST00000477578 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
ZC3HC1-207ENST00000477578 OSCARQ8IYS5 282 aa16.81■□□□□ 0.28
ZC3HC1-207ENST00000477578 ABCA10Q8WWZ4 1543 aa16.8■□□□□ 0.28
ZC3HC1-207ENST00000477578 CHD1O14646 1710 aa16.77■□□□□ 0.28
ZC3HC1-207ENST00000477578 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
ZC3HC1-207ENST00000477578 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
ZC3HC1-207ENST00000477578 GRIN2BQ13224 1484 aa16.74■□□□□ 0.27
ZC3HC1-207ENST00000477578 GAPVD1Q14C86 1478 aa16.74■□□□□ 0.27
ZC3HC1-207ENST00000477578 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
ZC3HC1-207ENST00000477578 FBLN2P98095 1184 aa16.71■□□□□ 0.27
ZC3HC1-207ENST00000477578 MAGI1Q96QZ7 1491 aaPredicted RBP16.7■□□□□ 0.26
ZC3HC1-207ENST00000477578 CHMP7Q8WUX9 453 aaPredicted RBP16.64■□□□□ 0.25
ZC3HC1-207ENST00000477578 SYNJ2O15056 1496 aa16.64■□□□□ 0.25
ZC3HC1-207ENST00000477578 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
ZC3HC1-207ENST00000477578 ADAMTS12P58397 1594 aa16.58■□□□□ 0.24
ZC3HC1-207ENST00000477578 RIMBP3CA6NJZ7 1639 aa16.58■□□□□ 0.24
ZC3HC1-207ENST00000477578 RIMBP3BA6NNM3 1639 aa16.58■□□□□ 0.24
ZC3HC1-207ENST00000477578 RIMBP3Q9UFD9 1639 aa16.58■□□□□ 0.24
ZC3HC1-207ENST00000477578 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
ZC3HC1-207ENST00000477578 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
ZC3HC1-207ENST00000477578 FHAD1B1AJZ9 1412 aa16.54■□□□□ 0.24
ZC3HC1-207ENST00000477578 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
ZC3HC1-207ENST00000477578 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
ZC3HC1-207ENST00000477578 KIF27Q86VH2 1401 aa16.52■□□□□ 0.23
ZC3HC1-207ENST00000477578 IGF1RP08069 1367 aa16.49■□□□□ 0.23
ZC3HC1-207ENST00000477578 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
ZC3HC1-207ENST00000477578 NUP160Q12769 1436 aa16.46■□□□□ 0.23
ZC3HC1-207ENST00000477578 CUL7Q14999 1698 aa16.43■□□□□ 0.22
ZC3HC1-207ENST00000477578 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
ZC3HC1-207ENST00000477578 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
ZC3HC1-207ENST00000477578 CYB5RLQ6IPT4 315 aa16.41■□□□□ 0.22
ZC3HC1-207ENST00000477578 CARMIL1Q5VZK9 1371 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms