RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 SLC24A1O60721 1099 aa10.88□□□□□ -0.67
RBM39-231ENST00000477334 DOK7Q18PE1 504 aa10.88□□□□□ -0.67
RBM39-231ENST00000477334 PLCB2Q00722 1185 aa10.87□□□□□ -0.67
RBM39-231ENST00000477334 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
RBM39-231ENST00000477334 CDAN1Q8IWY9 1227 aa10.86□□□□□ -0.67
RBM39-231ENST00000477334 EMP3P54852 163 aa10.85□□□□□ -0.67
RBM39-231ENST00000477334 ZNF710Q8N1W2 664 aa10.85□□□□□ -0.67
RBM39-231ENST00000477334 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
RBM39-231ENST00000477334 PPP1R37O75864 691 aa10.84□□□□□ -0.67
RBM39-231ENST00000477334 RIMBP2O15034 1052 aa10.83□□□□□ -0.68
RBM39-231ENST00000477334 PAXIP1Q6ZW49 1069 aaPredicted RBP10.82□□□□□ -0.68
RBM39-231ENST00000477334 KIF3CO14782 793 aa10.81□□□□□ -0.68
RBM39-231ENST00000477334 CFAP44Q96MT7 982 aa10.81□□□□□ -0.68
RBM39-231ENST00000477334 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
RBM39-231ENST00000477334 NKX1-1Q15270 411 aaPredicted RBP10.8□□□□□ -0.68
RBM39-231ENST00000477334 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
RBM39-231ENST00000477334 C2orf72A6NCS6 295 aa10.78□□□□□ -0.68
RBM39-231ENST00000477334 SPRYD3Q8NCJ5 442 aa10.77□□□□□ -0.69
RBM39-231ENST00000477334 FAM205CA6NFA0 338 aa10.76□□□□□ -0.69
RBM39-231ENST00000477334 HS3ST6Q96QI5 342 aa10.76□□□□□ -0.69
RBM39-231ENST00000477334 RYDENQ9NUL5 291 aaKnown RBP10.76□□□□□ -0.69
RBM39-231ENST00000477334 HAP1P54257 671 aaPredicted RBP10.75□□□□□ -0.69
RBM39-231ENST00000477334 TMC2Q8TDI7 906 aa10.75□□□□□ -0.69
RBM39-231ENST00000477334 POTEB3A0JP26 581 aa10.74□□□□□ -0.69
RBM39-231ENST00000477334 POTEBQ6S5H4 581 aa10.74□□□□□ -0.69
RBM39-231ENST00000477334 GPR153Q6NV75 609 aa10.73□□□□□ -0.69
RBM39-231ENST00000477334 ERBB3P21860 1342 aa10.69□□□□□ -0.7
RBM39-231ENST00000477334 ARSIQ5FYB1 569 aa10.68□□□□□ -0.7
RBM39-231ENST00000477334 GTPBP6O43824 516 aaPredicted RBP10.67□□□□□ -0.7
RBM39-231ENST00000477334 SLC34A2O95436 690 aa10.66□□□□□ -0.7
RBM39-231ENST00000477334 VARS2Q5ST30 1063 aaKnown RBP10.65□□□□□ -0.7
RBM39-231ENST00000477334 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
RBM39-231ENST00000477334 FOXK1P85037 733 aa10.64□□□□□ -0.71
RBM39-231ENST00000477334 KHSRPQ92945 711 aaKnown RBP eCLIP10.64□□□□□ -0.718e-12■■■□□ 15.3
RBM39-231ENST00000477334 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
RBM39-231ENST00000477334 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
RBM39-231ENST00000477334 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
RBM39-231ENST00000477334 PCDHGA4Q9Y5G9 962 aa10.61□□□□□ -0.71
RBM39-231ENST00000477334 DSG2Q14126 1118 aa10.6□□□□□ -0.71
RBM39-231ENST00000477334 PLPP6Q8IY26 295 aa10.6□□□□□ -0.71
RBM39-231ENST00000477334 NUDT7P0C024 238 aa10.59□□□□□ -0.71
RBM39-231ENST00000477334 SPNS2Q8IVW8 549 aa10.59□□□□□ -0.71
RBM39-231ENST00000477334 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
RBM39-231ENST00000477334 MMRN1Q13201 1228 aa10.58□□□□□ -0.72
RBM39-231ENST00000477334 CRISPLD2Q9H0B8 497 aa10.58□□□□□ -0.72
RBM39-231ENST00000477334 ZNF687Q8N1G0 1237 aa10.57□□□□□ -0.72
RBM39-231ENST00000477334 PTCD2Q8WV60 388 aaKnown RBP10.56□□□□□ -0.72
RBM39-231ENST00000477334 NCKAP5LQ9HCH0 1330 aa10.54□□□□□ -0.72
RBM39-231ENST00000477334 VSIG10Q8N0Z9 540 aa10.53□□□□□ -0.72
RBM39-231ENST00000477334 PDE4AP27815 886 aa10.52□□□□□ -0.73
RBM39-231ENST00000477334 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
RBM39-231ENST00000477334 PPP1R15BQ5SWA1 713 aa10.51□□□□□ -0.73
RBM39-231ENST00000477334 KDM4FA0A1W2PPD8 638 aa10.5□□□□□ -0.73
RBM39-231ENST00000477334 KDM2AQ9Y2K7 1162 aa10.5□□□□□ -0.73
RBM39-231ENST00000477334 TBC1D12O60347 775 aa10.49□□□□□ -0.73
RBM39-231ENST00000477334 PSDA5PKW4 1024 aaPredicted RBP10.46□□□□□ -0.73
RBM39-231ENST00000477334 OXER1Q8TDS5 423 aa10.46□□□□□ -0.73
RBM39-231ENST00000477334 DDX27Q96GQ7 796 aaKnown RBP10.46□□□□□ -0.73
RBM39-231ENST00000477334 LARP6Q9BRS8 491 aaKnown RBP10.46□□□□□ -0.73
RBM39-231ENST00000477334 MFSD10Q14728 455 aa10.45□□□□□ -0.74
RBM39-231ENST00000477334 PBX2P40425 430 aa10.44□□□□□ -0.74
RBM39-231ENST00000477334 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
RBM39-231ENST00000477334 UPF1Q92900 1129 aaKnown RBP eCLIP10.44□□□□□ -0.74
RBM39-231ENST00000477334 LSM11P83369 360 aaKnown RBP eCLIP10.41□□□□□ -0.741e-13■□□□□ 8.6
RBM39-231ENST00000477334 POTEEQ6S8J3 1075 aa10.4□□□□□ -0.74
RBM39-231ENST00000477334 ANKRD13DQ6ZTN6 518 aa10.38□□□□□ -0.75
RBM39-231ENST00000477334 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
RBM39-231ENST00000477334 PPP4R3BQ5MIZ7 849 aa10.37□□□□□ -0.75
RBM39-231ENST00000477334 PTGER2P43116 358 aa10.36□□□□□ -0.75
RBM39-231ENST00000477334 ARHGAP33O14559 1287 aa10.35□□□□□ -0.75
RBM39-231ENST00000477334 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
RBM39-231ENST00000477334 MYT1LQ9UL68 1186 aa10.34□□□□□ -0.75
RBM39-231ENST00000477334 RNF166Q96A37 237 aaPredicted RBP10.33□□□□□ -0.76
RBM39-231ENST00000477334 EVI5O60447 810 aa10.32□□□□□ -0.76
RBM39-231ENST00000477334 MAP3K9P80192 1104 aa10.32□□□□□ -0.76
RBM39-231ENST00000477334 ANO8Q9HCE9 1232 aaPredicted RBP10.32□□□□□ -0.76
RBM39-231ENST00000477334 ZNF454Q8N9F8 522 aa10.31□□□□□ -0.76
RBM39-231ENST00000477334 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
RBM39-231ENST00000477334 PSEN2P49810 448 aa10.29□□□□□ -0.76
RBM39-231ENST00000477334 FOSBP53539 338 aa10.29□□□□□ -0.76
RBM39-231ENST00000477334 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
RBM39-231ENST00000477334 ADGRD1Q6QNK2 874 aa10.28□□□□□ -0.76
RBM39-231ENST00000477334 JPH4Q96JJ6 628 aa10.28□□□□□ -0.76
RBM39-231ENST00000477334 DMRTA1Q5VZB9 504 aa10.27□□□□□ -0.77
RBM39-231ENST00000477334 KCNH8Q96L42 1107 aa10.27□□□□□ -0.77
RBM39-231ENST00000477334 KCNK17Q96T54 332 aa10.27□□□□□ -0.77
RBM39-231ENST00000477334 TK2O00142 265 aa10.26□□□□□ -0.77
RBM39-231ENST00000477334 BCL2L12Q9HB09 334 aa10.26□□□□□ -0.77
RBM39-231ENST00000477334 ZDHHC16Q969W1 377 aa10.23□□□□□ -0.77
RBM39-231ENST00000477334 DPYSL4O14531 572 aa10.22□□□□□ -0.77
RBM39-231ENST00000477334 HRO43593 1189 aa10.21□□□□□ -0.77
RBM39-231ENST00000477334 PTPREP23469 700 aa10.21□□□□□ -0.77
RBM39-231ENST00000477334 BCANQ96GW7 911 aa10.21□□□□□ -0.77
RBM39-231ENST00000477334 ADAM33Q9BZ11 813 aa10.2□□□□□ -0.78
RBM39-231ENST00000477334 PCDHGA10Q9Y5H3 936 aa10.19□□□□□ -0.78
RBM39-231ENST00000477334 PHF14O94880 888 aa10.18□□□□□ -0.78
RBM39-231ENST00000477334 KCNV2Q8TDN2 545 aa10.18□□□□□ -0.78
RBM39-231ENST00000477334 P3H3Q8IVL6 736 aa10.17□□□□□ -0.78
RBM39-231ENST00000477334 SLC4A5Q9BY07 1137 aa10.17□□□□□ -0.78
RBM39-231ENST00000477334 VPS9D1Q9Y2B5 631 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms