RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.16■□□□□ 0.98
CLSTN1-205ENST00000477264 NCOA2Q15596 1464 aa21.15■□□□□ 0.98
CLSTN1-205ENST00000477264 UACAQ9BZF9 1416 aa21.13■□□□□ 0.97
CLSTN1-205ENST00000477264 SIN3AQ96ST3 1273 aa21.09■□□□□ 0.97
CLSTN1-205ENST00000477264 ATP10BO94823 1461 aa21.08■□□□□ 0.97
CLSTN1-205ENST00000477264 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
CLSTN1-205ENST00000477264 PPP4R2Q9NY27 417 aa21.07■□□□□ 0.96
CLSTN1-205ENST00000477264 ABCC2Q92887 1545 aa21.06■□□□□ 0.96
CLSTN1-205ENST00000477264 MYOM3Q5VTT5 1437 aa21.06■□□□□ 0.96
CLSTN1-205ENST00000477264 FAM50AQ14320 339 aaKnown RBP21.06■□□□□ 0.96
CLSTN1-205ENST00000477264 TROQ12816 1431 aaPredicted RBP21.06■□□□□ 0.96
CLSTN1-205ENST00000477264 FGD6Q6ZV73 1430 aa21.05■□□□□ 0.96
CLSTN1-205ENST00000477264 PLEKHD1A6NEE1 506 aa21.05■□□□□ 0.96
CLSTN1-205ENST00000477264 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
CLSTN1-205ENST00000477264 DEKP35659 375 aaKnown RBP21.02■□□□□ 0.95
CLSTN1-205ENST00000477264 HNRNPUQ00839 825 aaKnown RBP eCLIP21■□□□□ 0.95
CLSTN1-205ENST00000477264 UHRF1BP1LA0JNW5 1464 aa21■□□□□ 0.95
CLSTN1-205ENST00000477264 ADCY10Q96PN6 1610 aa20.99■□□□□ 0.95
CLSTN1-205ENST00000477264 KIF14Q15058 1648 aa20.96■□□□□ 0.95
CLSTN1-205ENST00000477264 PTPN23Q9H3S7 1636 aa20.96■□□□□ 0.95
CLSTN1-205ENST00000477264 MIA2Q96PC5 1412 aa20.95■□□□□ 0.94
CLSTN1-205ENST00000477264 PRKCSHP14314 528 aaPredicted RBP20.95■□□□□ 0.94
CLSTN1-205ENST00000477264 ZCCHC11Q5TAX3 1644 aaKnown RBP20.93■□□□□ 0.94
CLSTN1-205ENST00000477264 ITSN2Q9NZM3 1697 aa20.93■□□□□ 0.94
CLSTN1-205ENST00000477264 KDM5BQ9UGL1 1544 aa20.92■□□□□ 0.94
CLSTN1-205ENST00000477264 NOP58Q9Y2X3 529 aaKnown RBP20.92■□□□□ 0.94
CLSTN1-205ENST00000477264 HFM1A2PYH4 1435 aa20.91■□□□□ 0.94
CLSTN1-205ENST00000477264 HIRIP3Q9BW71 556 aaPredicted RBP20.89■□□□□ 0.94
CLSTN1-205ENST00000477264 TCOF1Q13428 1488 aaKnown RBP20.89■□□□□ 0.94
CLSTN1-205ENST00000477264 POLR1AO95602 1720 aaPredicted RBP20.88■□□□□ 0.93
CLSTN1-205ENST00000477264 CNTLNQ9NXG0 1405 aa20.88■□□□□ 0.93
CLSTN1-205ENST00000477264 GPATCH8Q9UKJ3 1502 aaKnown RBP20.86■□□□□ 0.93
CLSTN1-205ENST00000477264 CFDP1Q9UEE9 299 aaPredicted RBP20.86■□□□□ 0.93
CLSTN1-205ENST00000477264 IRX6P78412 446 aaPredicted RBP20.85■□□□□ 0.93
CLSTN1-205ENST00000477264 ABCC10Q5T3U5 1492 aa20.85■□□□□ 0.93
CLSTN1-205ENST00000477264 ZBED9Q6R2W3 1325 aa20.84■□□□□ 0.93
CLSTN1-205ENST00000477264 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
CLSTN1-205ENST00000477264 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
CLSTN1-205ENST00000477264 GCC2Q8IWJ2 1684 aa20.79■□□□□ 0.92
CLSTN1-205ENST00000477264 DNAJC5Q9H3Z4 198 aa20.79■□□□□ 0.92
CLSTN1-205ENST00000477264 ZNF777Q9ULD5 760 aaPredicted RBP20.79■□□□□ 0.92
CLSTN1-205ENST00000477264 CAMSAP2Q08AD1 1489 aa20.78■□□□□ 0.92
CLSTN1-205ENST00000477264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.77■□□□□ 0.92
CLSTN1-205ENST00000477264 ZNF644Q9H582 1327 aaPredicted RBP20.77■□□□□ 0.92
CLSTN1-205ENST00000477264 PTPRKQ15262 1439 aa20.76■□□□□ 0.91
CLSTN1-205ENST00000477264 PREX2Q70Z35 1606 aa20.76■□□□□ 0.91
CLSTN1-205ENST00000477264 TTC37Q6PGP7 1564 aa20.76■□□□□ 0.91
CLSTN1-205ENST00000477264 WASHC2AQ641Q2 1341 aa20.75■□□□□ 0.91
CLSTN1-205ENST00000477264 WDR7Q9Y4E6 1490 aa20.75■□□□□ 0.91
CLSTN1-205ENST00000477264 RIMBP3CA6NJZ7 1639 aa20.74■□□□□ 0.91
CLSTN1-205ENST00000477264 RIMBP3BA6NNM3 1639 aa20.74■□□□□ 0.91
CLSTN1-205ENST00000477264 DNMT1P26358 1616 aaKnown RBP20.74■□□□□ 0.91
CLSTN1-205ENST00000477264 RIMBP3Q9UFD9 1639 aa20.74■□□□□ 0.91
CLSTN1-205ENST00000477264 MYO5CQ9NQX4 1742 aa20.74■□□□□ 0.91
CLSTN1-205ENST00000477264 ANP32AP39687 249 aaKnown RBP20.73■□□□□ 0.91
CLSTN1-205ENST00000477264 RTL5Q5HYW3 569 aaPredicted RBP20.73■□□□□ 0.91
CLSTN1-205ENST00000477264 NAIPQ13075 1403 aa20.73■□□□□ 0.91
CLSTN1-205ENST00000477264 CDC42BPBQ9Y5S2 1711 aa20.73■□□□□ 0.91
CLSTN1-205ENST00000477264 DAPK1P53355 1430 aa20.73■□□□□ 0.91
CLSTN1-205ENST00000477264 B4GALNT3Q6L9W6 998 aa20.72■□□□□ 0.91
CLSTN1-205ENST00000477264 NCOA1Q15788 1441 aa20.71■□□□□ 0.91
CLSTN1-205ENST00000477264 CHIC2Q9UKJ5 165 aa20.71■□□□□ 0.91
CLSTN1-205ENST00000477264 SMG6Q86US8 1419 aaKnown RBP20.71■□□□□ 0.91
CLSTN1-205ENST00000477264 ASXL2Q76L83 1435 aa20.7■□□□□ 0.9
CLSTN1-205ENST00000477264 ARHGAP5Q13017 1502 aa20.7■□□□□ 0.9
CLSTN1-205ENST00000477264 IPO9Q96P70 1041 aaKnown RBP20.69■□□□□ 0.9
CLSTN1-205ENST00000477264 HSPA5P11021 654 aaKnown RBP20.69■□□□□ 0.9
CLSTN1-205ENST00000477264 CYB5RLQ6IPT4 315 aa20.69■□□□□ 0.9
CLSTN1-205ENST00000477264 ABCC5O15440 1437 aa20.69■□□□□ 0.9
CLSTN1-205ENST00000477264 EIF4G2P78344 907 aaKnown RBP eCLIP20.68■□□□□ 0.9
CLSTN1-205ENST00000477264 AKNAQ7Z591 1439 aa20.68■□□□□ 0.9
CLSTN1-205ENST00000477264 NBR1Q14596 966 aa20.66■□□□□ 0.9
CLSTN1-205ENST00000477264 PRKRIP1Q9H875 184 aaPredicted RBP20.66■□□□□ 0.9
CLSTN1-205ENST00000477264 PAK3O75914 559 aaPredicted RBP20.65■□□□□ 0.9
CLSTN1-205ENST00000477264 RRP7BPQ9NSQ0 103 aa20.65■□□□□ 0.9
CLSTN1-205ENST00000477264 CCDC7Q96M83 1385 aa20.65■□□□□ 0.9
CLSTN1-205ENST00000477264 PLCH2O75038 1416 aa20.64■□□□□ 0.9
CLSTN1-205ENST00000477264 SAMD9LQ8IVG5 1584 aa20.64■□□□□ 0.9
CLSTN1-205ENST00000477264 CROCC2H7BZ55 1655 aa20.64■□□□□ 0.89
CLSTN1-205ENST00000477264 RNF123Q5XPI4 1314 aa20.63■□□□□ 0.89
CLSTN1-205ENST00000477264 ROCK1Q13464 1354 aa20.63■□□□□ 0.89
CLSTN1-205ENST00000477264 MRS2Q9HD23 443 aa20.62■□□□□ 0.89
CLSTN1-205ENST00000477264 ADGBQ8N7X0 1667 aa20.62■□□□□ 0.89
CLSTN1-205ENST00000477264 ABCA9Q8IUA7 1624 aa20.61■□□□□ 0.89
CLSTN1-205ENST00000477264 EFCAB2Q5VUJ9 269 aa20.61■□□□□ 0.89
CLSTN1-205ENST00000477264 ZBTB47Q9UFB7 747 aaPredicted RBP20.61■□□□□ 0.89
CLSTN1-205ENST00000477264 ARHGEF5Q12774 1597 aa20.6■□□□□ 0.89
CLSTN1-205ENST00000477264 PLEKHH2Q8IVE3 1493 aa20.6■□□□□ 0.89
CLSTN1-205ENST00000477264 HNRNPMP52272 730 aaKnown RBP eCLIP20.6■□□□□ 0.89
CLSTN1-205ENST00000477264 RSPH4AQ5TD94 716 aa20.6■□□□□ 0.89
CLSTN1-205ENST00000477264 TSPY4P0CV99 314 aa20.59■□□□□ 0.89
CLSTN1-205ENST00000477264 TSPY10P0CW01 314 aa20.59■□□□□ 0.89
CLSTN1-205ENST00000477264 ARAP3Q8WWN8 1544 aa20.59■□□□□ 0.89
CLSTN1-205ENST00000477264 SHANK2Q9UPX8 1470 aa20.57■□□□□ 0.88
CLSTN1-205ENST00000477264 SYCP2Q9BX26 1530 aa20.57■□□□□ 0.88
CLSTN1-205ENST00000477264 MBD5Q9P267 1494 aa20.57■□□□□ 0.88
CLSTN1-205ENST00000477264 USP35Q9P2H5 1018 aa20.56■□□□□ 0.88
CLSTN1-205ENST00000477264 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
CLSTN1-205ENST00000477264 CCDC184Q52MB2 194 aa20.56■□□□□ 0.88
CLSTN1-205ENST00000477264 FAM9BQ8IZU0 186 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms