RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 CASKIN1Q8WXD9 1431 aa30.89■■■□□ 2.53
GMDS-204ENST00000476972 MLECQ14165 292 aa30.88■■■□□ 2.53
GMDS-204ENST00000476972 PLPPR3Q6T4P5 718 aa30.88■■■□□ 2.53
GMDS-204ENST00000476972 POGZQ7Z3K3 1410 aa30.88■■■□□ 2.53
GMDS-204ENST00000476972 MAGI2Q86UL8 1455 aa30.88■■■□□ 2.53
GMDS-204ENST00000476972 ZMYM4Q5VZL5 1548 aa30.87■■■□□ 2.53
GMDS-204ENST00000476972 ZFYVE16Q7Z3T8 1539 aa30.86■■■□□ 2.53
GMDS-204ENST00000476972 FYCO1Q9BQS8 1478 aa30.83■■■□□ 2.53
GMDS-204ENST00000476972 CCDC18Q5T9S5 1454 aa30.82■■■□□ 2.52
GMDS-204ENST00000476972 LMTK3Q96Q04 1460 aa30.81■■■□□ 2.52
GMDS-204ENST00000476972 KIF14Q15058 1648 aa30.8■■■□□ 2.52
GMDS-204ENST00000476972 TROQ12816 1431 aaPredicted RBP30.79■■■□□ 2.52
GMDS-204ENST00000476972 HSPA2P54652 639 aa30.78■■■□□ 2.52
GMDS-204ENST00000476972 CEP162Q5TB80 1403 aa30.78■■■□□ 2.52
GMDS-204ENST00000476972 AFAP1Q8N556 730 aa30.77■■■□□ 2.52
GMDS-204ENST00000476972 FBXO41Q8TF61 875 aa30.77■■■□□ 2.52
GMDS-204ENST00000476972 RIMS1Q86UR5 1692 aaKnown RBP30.75■■■□□ 2.51
GMDS-204ENST00000476972 ATP10AO60312 1499 aa30.75■■■□□ 2.51
GMDS-204ENST00000476972 MYO5CQ9NQX4 1742 aa30.73■■■□□ 2.51
GMDS-204ENST00000476972 SIGLEC1Q9BZZ2 1709 aa30.72■■■□□ 2.51
GMDS-204ENST00000476972 MYT1LQ9UL68 1186 aa30.69■■■□□ 2.5
GMDS-204ENST00000476972 ARHGAP5Q13017 1502 aa30.68■■■□□ 2.5
GMDS-204ENST00000476972 C9orf84Q5VXU9 1444 aa30.67■■■□□ 2.5
GMDS-204ENST00000476972 ZNF518AQ6AHZ1 1483 aa30.65■■■□□ 2.5
GMDS-204ENST00000476972 LOC105371045A0A1W2PR82 267 aa30.65■■■□□ 2.5
GMDS-204ENST00000476972 CEBPAP49715 358 aaPredicted RBP30.64■■■□□ 2.5
GMDS-204ENST00000476972 ARHGEF12Q9NZN5 1544 aa30.6■■■□□ 2.49
GMDS-204ENST00000476972 PREX2Q70Z35 1606 aa30.57■■■□□ 2.48
GMDS-204ENST00000476972 CDC42BPBQ9Y5S2 1711 aa30.56■■■□□ 2.48
GMDS-204ENST00000476972 KDM5CP41229 1560 aa30.54■■■□□ 2.48
GMDS-204ENST00000476972 TRAPPC8Q9Y2L5 1435 aa30.54■■■□□ 2.48
GMDS-204ENST00000476972 CDC42BPAQ5VT25 1732 aa30.52■■■□□ 2.48
GMDS-204ENST00000476972 MLH3Q9UHC1 1453 aa30.51■■■□□ 2.48
GMDS-204ENST00000476972 FER1L4A9Z1Z3 1794 aa30.5■■■□□ 2.47
GMDS-204ENST00000476972 ZNF777Q9ULD5 760 aaPredicted RBP30.48■■■□□ 2.47
GMDS-204ENST00000476972 DIP2CQ9Y2E4 1556 aa30.45■■■□□ 2.47
GMDS-204ENST00000476972 MTUS2Q5JR59 1369 aa30.43■■■□□ 2.46
GMDS-204ENST00000476972 EHBP1L1Q8N3D4 1523 aa30.43■■■□□ 2.46
GMDS-204ENST00000476972 CERKQ8TCT0 537 aa30.43■■■□□ 2.46
GMDS-204ENST00000476972 ESF1Q9H501 851 aaKnown RBP30.43■■■□□ 2.46
GMDS-204ENST00000476972 ABCC1P33527 1531 aa30.42■■■□□ 2.46
GMDS-204ENST00000476972 VPS8Q8N3P4 1428 aa30.42■■■□□ 2.46
GMDS-204ENST00000476972 HNRNPMP52272 730 aaKnown RBP eCLIP30.4■■■□□ 2.46
GMDS-204ENST00000476972 REREQ9P2R6 1566 aa30.4■■■□□ 2.46
GMDS-204ENST00000476972 ITSN2Q9NZM3 1697 aa30.38■■■□□ 2.45
GMDS-204ENST00000476972 GPATCH8Q9UKJ3 1502 aaKnown RBP30.37■■■□□ 2.45
GMDS-204ENST00000476972 ABCA6Q8N139 1617 aa30.37■■■□□ 2.45
GMDS-204ENST00000476972 DMRT2Q9Y5R5 561 aa30.36■■■□□ 2.45
GMDS-204ENST00000476972 UHRF1BP1Q6BDS2 1440 aa30.36■■■□□ 2.45
GMDS-204ENST00000476972 AGLP35573 1532 aa30.36■■■□□ 2.45
GMDS-204ENST00000476972 TIAM1Q13009 1591 aa30.36■■■□□ 2.45
GMDS-204ENST00000476972 CFDP1Q9UEE9 299 aaPredicted RBP30.35■■■□□ 2.45
GMDS-204ENST00000476972 SAMD9LQ8IVG5 1584 aa30.34■■■□□ 2.45
GMDS-204ENST00000476972 SPAG9O60271 1321 aaKnown RBP30.34■■■□□ 2.45
GMDS-204ENST00000476972 CCNB3Q8WWL7 1395 aa30.3■■■□□ 2.44
GMDS-204ENST00000476972 PREX1Q8TCU6 1659 aa30.3■■■□□ 2.44
GMDS-204ENST00000476972 SUPT6HQ7KZ85 1726 aaKnown RBP30.27■■■□□ 2.44
GMDS-204ENST00000476972 SYCP2Q9BX26 1530 aa30.27■■■□□ 2.44
GMDS-204ENST00000476972 KIDINS220Q9ULH0 1771 aa30.26■■■□□ 2.44
GMDS-204ENST00000476972 KIAA1107Q9UPP5 1409 aa30.25■■■□□ 2.43
GMDS-204ENST00000476972 CNTLNQ9NXG0 1405 aa30.24■■■□□ 2.43
GMDS-204ENST00000476972 NCOA2Q15596 1464 aa30.21■■■□□ 2.43
GMDS-204ENST00000476972 MAP3K1Q13233 1512 aa30.2■■■□□ 2.42
GMDS-204ENST00000476972 ZNF644Q9H582 1327 aaPredicted RBP30.2■■■□□ 2.42
GMDS-204ENST00000476972 LRRC9Q6ZRR7 1453 aa30.19■■■□□ 2.42
GMDS-204ENST00000476972 PLEKHH2Q8IVE3 1493 aa30.19■■■□□ 2.42
GMDS-204ENST00000476972 SETD1BQ9UPS6 1966 aaKnown RBP30.19■■■□□ 2.42
GMDS-204ENST00000476972 ZMYM3Q14202 1370 aa30.19■■■□□ 2.42
GMDS-204ENST00000476972 C3P01024 1663 aa30.18■■■□□ 2.42
GMDS-204ENST00000476972 STRCQ7RTU9 1775 aa30.15■■■□□ 2.42
GMDS-204ENST00000476972 GGT6Q6P531 493 aa30.15■■■□□ 2.42
GMDS-204ENST00000476972 PTPRTO14522 1441 aa30.14■■■□□ 2.42
GMDS-204ENST00000476972 A2MP01023 1474 aa30.12■■■□□ 2.41
GMDS-204ENST00000476972 ATP7AQ04656 1500 aa30.12■■■□□ 2.41
GMDS-204ENST00000476972 NPATQ14207 1427 aa30.11■■■□□ 2.41
GMDS-204ENST00000476972 INO80Q9ULG1 1556 aaPredicted RBP30.09■■■□□ 2.41
GMDS-204ENST00000476972 NCOA1Q15788 1441 aa30.06■■■□□ 2.4
GMDS-204ENST00000476972 KANK4Q5T7N3 995 aaPredicted RBP30.06■■■□□ 2.4
GMDS-204ENST00000476972 MBD5Q9P267 1494 aa30.06■■■□□ 2.4
GMDS-204ENST00000476972 PPP6R1Q9UPN7 881 aa30.05■■■□□ 2.4
GMDS-204ENST00000476972 CAMSAP2Q08AD1 1489 aa30.05■■■□□ 2.4
GMDS-204ENST00000476972 PLXNC1O60486 1568 aa30.03■■■□□ 2.4
GMDS-204ENST00000476972 NCKAP5LQ9HCH0 1330 aa30.02■■■□□ 2.4
GMDS-204ENST00000476972 PTPRKQ15262 1439 aa29.99■■■□□ 2.39
GMDS-204ENST00000476972 RTEL1-TNFRSF6BF6WH68 1400 aa29.98■■■□□ 2.39
GMDS-204ENST00000476972 DHX29Q7Z478 1369 aaKnown RBP29.98■■■□□ 2.39
GMDS-204ENST00000476972 MROH2AA6NES4 1674 aa29.97■■■□□ 2.39
GMDS-204ENST00000476972 CAMSAP1Q5T5Y3 1602 aa29.96■■■□□ 2.39
GMDS-204ENST00000476972 CCDC141Q6ZP82 1450 aa29.95■■■□□ 2.39
GMDS-204ENST00000476972 APLP2Q06481 763 aa29.95■■■□□ 2.39
GMDS-204ENST00000476972 LTBP4Q8N2S1 1624 aa29.93■■■□□ 2.38
GMDS-204ENST00000476972 KIF3BO15066 747 aa29.93■■■□□ 2.38
GMDS-204ENST00000476972 RSPH4AQ5TD94 716 aa29.93■■■□□ 2.38
GMDS-204ENST00000476972 MYOM3Q5VTT5 1437 aa29.93■■■□□ 2.38
GMDS-204ENST00000476972 CLTCQ00610 1675 aaKnown RBP29.92■■■□□ 2.38
GMDS-204ENST00000476972 ADGBQ8N7X0 1667 aa29.92■■■□□ 2.38
GMDS-204ENST00000476972 ARHGEF5Q12774 1597 aa29.92■■■□□ 2.38
GMDS-204ENST00000476972 PKD2Q13563 968 aa29.92■■■□□ 2.38
GMDS-204ENST00000476972 ZNF335Q9H4Z2 1342 aaPredicted RBP29.88■■■□□ 2.37
GMDS-204ENST00000476972 MIA2Q96PC5 1412 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms