RNA–Protein interactions for RNA: ENST00000476729.5

FLOT1-209, Transcript of flotillin 1, humanhuman

TSL 2

Gene FLOT1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-209ENST00000476729 RIMS1Q86UR5 1692 aaKnown RBP25.11■■□□□ 1.61
FLOT1-209ENST00000476729 EFCAB2Q5VUJ9 269 aa25.11■■□□□ 1.61
FLOT1-209ENST00000476729 MLECQ14165 292 aa25.1■■□□□ 1.61
FLOT1-209ENST00000476729 MAGI2Q86UL8 1455 aa25.09■■□□□ 1.61
FLOT1-209ENST00000476729 KIF14Q15058 1648 aa25.09■■□□□ 1.61
FLOT1-209ENST00000476729 TROQ12816 1431 aaPredicted RBP25.08■■□□□ 1.61
FLOT1-209ENST00000476729 SIGLEC1Q9BZZ2 1709 aa25.07■■□□□ 1.6
FLOT1-209ENST00000476729 MYO5CQ9NQX4 1742 aa25.06■■□□□ 1.6
FLOT1-209ENST00000476729 PCF11O94913 1555 aaKnown RBP25.05■■□□□ 1.6
FLOT1-209ENST00000476729 CLIP1P30622 1438 aa25.04■■□□□ 1.6
FLOT1-209ENST00000476729 LMTK3Q96Q04 1460 aa25.04■■□□□ 1.6
FLOT1-209ENST00000476729 ARHGAP5Q13017 1502 aa25.02■■□□□ 1.6
FLOT1-209ENST00000476729 LRRIQ1Q96JM4 1722 aa25■■□□□ 1.59
FLOT1-209ENST00000476729 ATP10AO60312 1499 aa25■■□□□ 1.59
FLOT1-209ENST00000476729 HSPA2P54652 639 aa24.99■■□□□ 1.59
FLOT1-209ENST00000476729 AFAP1Q8N556 730 aa24.99■■□□□ 1.59
FLOT1-209ENST00000476729 C9orf84Q5VXU9 1444 aa24.98■■□□□ 1.59
FLOT1-209ENST00000476729 MYT1LQ9UL68 1186 aa24.98■■□□□ 1.59
FLOT1-209ENST00000476729 ZNF518AQ6AHZ1 1483 aa24.96■■□□□ 1.59
FLOT1-209ENST00000476729 CASKIN1Q8WXD9 1431 aa24.95■■□□□ 1.59
FLOT1-209ENST00000476729 CCDC18Q5T9S5 1454 aa24.93■■□□□ 1.58
FLOT1-209ENST00000476729 FER1L4A9Z1Z3 1794 aa24.93■■□□□ 1.58
FLOT1-209ENST00000476729 FBXO41Q8TF61 875 aa24.91■■□□□ 1.58
FLOT1-209ENST00000476729 ARHGEF12Q9NZN5 1544 aa24.9■■□□□ 1.58
FLOT1-209ENST00000476729 KDM5CP41229 1560 aa24.89■■□□□ 1.58
FLOT1-209ENST00000476729 CEBPAP49715 358 aaPredicted RBP24.88■■□□□ 1.57
FLOT1-209ENST00000476729 CDC42BPBQ9Y5S2 1711 aa24.88■■□□□ 1.57
FLOT1-209ENST00000476729 PREX2Q70Z35 1606 aa24.86■■□□□ 1.57
FLOT1-209ENST00000476729 TRAPPC8Q9Y2L5 1435 aa24.86■■□□□ 1.57
FLOT1-209ENST00000476729 DIP2CQ9Y2E4 1556 aa24.84■■□□□ 1.57
FLOT1-209ENST00000476729 FYCO1Q9BQS8 1478 aa24.84■■□□□ 1.57
FLOT1-209ENST00000476729 ABCC1P33527 1531 aa24.83■■□□□ 1.57
FLOT1-209ENST00000476729 ZNF777Q9ULD5 760 aaPredicted RBP24.82■■□□□ 1.56
FLOT1-209ENST00000476729 MLH3Q9UHC1 1453 aa24.82■■□□□ 1.56
FLOT1-209ENST00000476729 ABCA6Q8N139 1617 aa24.8■■□□□ 1.56
FLOT1-209ENST00000476729 ITSN2Q9NZM3 1697 aa24.77■■□□□ 1.56
FLOT1-209ENST00000476729 CDC42BPAQ5VT25 1732 aa24.76■■□□□ 1.55
FLOT1-209ENST00000476729 REREQ9P2R6 1566 aa24.76■■□□□ 1.55
FLOT1-209ENST00000476729 PREX1Q8TCU6 1659 aa24.72■■□□□ 1.55
FLOT1-209ENST00000476729 GPATCH8Q9UKJ3 1502 aaKnown RBP24.72■■□□□ 1.55
FLOT1-209ENST00000476729 ESF1Q9H501 851 aaKnown RBP24.72■■□□□ 1.55
FLOT1-209ENST00000476729 HNRNPMP52272 730 aaKnown RBP eCLIP24.71■■□□□ 1.55
FLOT1-209ENST00000476729 SAMD9LQ8IVG5 1584 aa24.71■■□□□ 1.55
FLOT1-209ENST00000476729 AGLP35573 1532 aa24.71■■□□□ 1.55
FLOT1-209ENST00000476729 SYCP2Q9BX26 1530 aa24.7■■□□□ 1.54
FLOT1-209ENST00000476729 KIDINS220Q9ULH0 1771 aa24.7■■□□□ 1.54
FLOT1-209ENST00000476729 UHRF1BP1Q6BDS2 1440 aa24.69■■□□□ 1.54
FLOT1-209ENST00000476729 CFDP1Q9UEE9 299 aaPredicted RBP24.68■■□□□ 1.54
FLOT1-209ENST00000476729 SPAG9O60271 1321 aaKnown RBP24.67■■□□□ 1.54
FLOT1-209ENST00000476729 MTUS2Q5JR59 1369 aa24.67■■□□□ 1.54
FLOT1-209ENST00000476729 CCNB3Q8WWL7 1395 aa24.67■■□□□ 1.54
FLOT1-209ENST00000476729 CERKQ8TCT0 537 aa24.66■■□□□ 1.54
FLOT1-209ENST00000476729 C3P01024 1663 aa24.63■■□□□ 1.53
FLOT1-209ENST00000476729 KIAA1107Q9UPP5 1409 aa24.6■■□□□ 1.53
FLOT1-209ENST00000476729 PLEKHH2Q8IVE3 1493 aa24.59■■□□□ 1.53
FLOT1-209ENST00000476729 CNTLNQ9NXG0 1405 aa24.59■■□□□ 1.53
FLOT1-209ENST00000476729 DMRT2Q9Y5R5 561 aa24.58■■□□□ 1.53
FLOT1-209ENST00000476729 SETD1BQ9UPS6 1966 aaKnown RBP24.58■■□□□ 1.52
FLOT1-209ENST00000476729 ATP7AQ04656 1500 aa24.57■■□□□ 1.52
FLOT1-209ENST00000476729 ZNF644Q9H582 1327 aaPredicted RBP24.57■■□□□ 1.52
FLOT1-209ENST00000476729 STRCQ7RTU9 1775 aa24.57■■□□□ 1.52
FLOT1-209ENST00000476729 CEP162Q5TB80 1403 aa24.55■■□□□ 1.52
FLOT1-209ENST00000476729 SUPT6HQ7KZ85 1726 aaKnown RBP24.55■■□□□ 1.52
FLOT1-209ENST00000476729 A2MP01023 1474 aa24.53■■□□□ 1.52
FLOT1-209ENST00000476729 TIAM1Q13009 1591 aa24.53■■□□□ 1.52
FLOT1-209ENST00000476729 INO80Q9ULG1 1556 aaPredicted RBP24.53■■□□□ 1.52
FLOT1-209ENST00000476729 ZMYM3Q14202 1370 aa24.53■■□□□ 1.52
FLOT1-209ENST00000476729 EHBP1L1Q8N3D4 1523 aa24.52■■□□□ 1.52
FLOT1-209ENST00000476729 GGT6Q6P531 493 aa24.51■■□□□ 1.51
FLOT1-209ENST00000476729 PLXNC1O60486 1568 aa24.48■■□□□ 1.51
FLOT1-209ENST00000476729 PTPRTO14522 1441 aa24.47■■□□□ 1.51
FLOT1-209ENST00000476729 NPATQ14207 1427 aa24.47■■□□□ 1.51
FLOT1-209ENST00000476729 MROH2AA6NES4 1674 aa24.46■■□□□ 1.51
FLOT1-209ENST00000476729 MBD5Q9P267 1494 aa24.45■■□□□ 1.51
FLOT1-209ENST00000476729 NCOA1Q15788 1441 aa24.45■■□□□ 1.51
FLOT1-209ENST00000476729 CLTCQ00610 1675 aaKnown RBP24.44■■□□□ 1.5
FLOT1-209ENST00000476729 CAMSAP1Q5T5Y3 1602 aa24.41■■□□□ 1.5
FLOT1-209ENST00000476729 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
FLOT1-209ENST00000476729 ADGBQ8N7X0 1667 aa24.39■■□□□ 1.49
FLOT1-209ENST00000476729 RTEL1-TNFRSF6BF6WH68 1400 aa24.38■■□□□ 1.49
FLOT1-209ENST00000476729 PTPRKQ15262 1439 aa24.38■■□□□ 1.49
FLOT1-209ENST00000476729 NCKAP5LQ9HCH0 1330 aa24.37■■□□□ 1.49
FLOT1-209ENST00000476729 DHX29Q7Z478 1369 aaKnown RBP24.36■■□□□ 1.49
FLOT1-209ENST00000476729 CAMSAP2Q08AD1 1489 aa24.36■■□□□ 1.49
FLOT1-209ENST00000476729 CCDC141Q6ZP82 1450 aa24.35■■□□□ 1.49
FLOT1-209ENST00000476729 LOC105371045A0A1W2PR82 267 aa24.35■■□□□ 1.49
FLOT1-209ENST00000476729 PPP6R1Q9UPN7 881 aa24.35■■□□□ 1.49
FLOT1-209ENST00000476729 MYO3AQ8NEV4 1616 aa24.34■■□□□ 1.49
FLOT1-209ENST00000476729 LTBP4Q8N2S1 1624 aa24.33■■□□□ 1.49
FLOT1-209ENST00000476729 KIF3BO15066 747 aa24.33■■□□□ 1.49
FLOT1-209ENST00000476729 CEP170BQ9Y4F5 1589 aaPredicted RBP24.31■■□□□ 1.48
FLOT1-209ENST00000476729 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
FLOT1-209ENST00000476729 ZNF142P52746 1687 aaPredicted RBP24.28■■□□□ 1.48
FLOT1-209ENST00000476729 RSPH4AQ5TD94 716 aa24.28■■□□□ 1.48
FLOT1-209ENST00000476729 ZNF335Q9H4Z2 1342 aaPredicted RBP24.28■■□□□ 1.48
FLOT1-209ENST00000476729 PKD2Q13563 968 aa24.27■■□□□ 1.48
FLOT1-209ENST00000476729 PLA2R1Q13018 1463 aa24.26■■□□□ 1.47
FLOT1-209ENST00000476729 FBXO31Q5XUX0 539 aaPredicted RBP24.26■■□□□ 1.47
FLOT1-209ENST00000476729 LRRC9Q6ZRR7 1453 aa24.26■■□□□ 1.47
FLOT1-209ENST00000476729 TSPY4P0CV99 314 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms