RNA–Protein interactions for RNA: ENST00000476408.1

CD53-204, Transcript of CD53 molecule, humanhuman

TSL 5

Gene CD53, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-204ENST00000476408 PTPN23Q9H3S7 1636 aa9.53□□□□□ -0.88
CD53-204ENST00000476408 KDM5BQ9UGL1 1544 aa9.53□□□□□ -0.88
CD53-204ENST00000476408 CTTNBP2Q8WZ74 1663 aa9.53□□□□□ -0.88
CD53-204ENST00000476408 DIP2BQ9P265 1576 aa9.53□□□□□ -0.88
CD53-204ENST00000476408 GCC2Q8IWJ2 1684 aa9.51□□□□□ -0.89
CD53-204ENST00000476408 TONSLQ96HA7 1378 aa9.51□□□□□ -0.89
CD53-204ENST00000476408 SAMD9Q5K651 1589 aa9.51□□□□□ -0.89
CD53-204ENST00000476408 TCOF1Q13428 1488 aaKnown RBP9.51□□□□□ -0.89
CD53-204ENST00000476408 EHBP1L1Q8N3D4 1523 aa9.51□□□□□ -0.89
CD53-204ENST00000476408 POLR1AO95602 1720 aaPredicted RBP9.51□□□□□ -0.89
CD53-204ENST00000476408 HECW2Q9P2P5 1572 aa9.5□□□□□ -0.89
CD53-204ENST00000476408 ADCY10Q96PN6 1610 aa9.49□□□□□ -0.89
CD53-204ENST00000476408 LMTK3Q96Q04 1460 aa9.49□□□□□ -0.89
CD53-204ENST00000476408 DDX10Q13206 875 aaKnown RBP9.49□□□□□ -0.89
CD53-204ENST00000476408 CDK11AQ9UQ88 783 aaPredicted RBP9.49□□□□□ -0.89
CD53-204ENST00000476408 PPP4R2Q9NY27 417 aa9.48□□□□□ -0.89
CD53-204ENST00000476408 SUPT6HQ7KZ85 1726 aaKnown RBP9.48□□□□□ -0.89
CD53-204ENST00000476408 MYOM3Q5VTT5 1437 aa9.48□□□□□ -0.89
CD53-204ENST00000476408 NAIPQ13075 1403 aa9.47□□□□□ -0.89
CD53-204ENST00000476408 CNTLNQ9NXG0 1405 aa9.47□□□□□ -0.89
CD53-204ENST00000476408 MIA2Q96PC5 1412 aa9.46□□□□□ -0.9
CD53-204ENST00000476408 ZBED9Q6R2W3 1325 aa9.45□□□□□ -0.9
CD53-204ENST00000476408 UGGT2Q9NYU1 1516 aa9.45□□□□□ -0.9
CD53-204ENST00000476408 SOCS7O14512 581 aa9.44□□□□□ -0.9
CD53-204ENST00000476408 KCNH8Q96L42 1107 aa9.44□□□□□ -0.9
CD53-204ENST00000476408 NCOA1Q15788 1441 aa9.44□□□□□ -0.9
CD53-204ENST00000476408 ADGRL1O94910 1474 aa9.44□□□□□ -0.9
CD53-204ENST00000476408 KIAA0586Q9BVV6 1533 aa9.44□□□□□ -0.9
CD53-204ENST00000476408 ARID4BQ4LE39 1312 aaPredicted RBP9.43□□□□□ -0.9
CD53-204ENST00000476408 PTPRGP23470 1445 aa9.42□□□□□ -0.9
CD53-204ENST00000476408 ROCK1Q13464 1354 aa9.41□□□□□ -0.9
CD53-204ENST00000476408 RNF123Q5XPI4 1314 aa9.41□□□□□ -0.9
CD53-204ENST00000476408 SIN3AQ96ST3 1273 aa9.41□□□□□ -0.9
CD53-204ENST00000476408 GLI2P10070 1586 aa9.4□□□□□ -0.9
CD53-204ENST00000476408 PLB1Q6P1J6 1458 aa9.4□□□□□ -0.91
CD53-204ENST00000476408 SMG6Q86US8 1419 aaKnown RBP9.39□□□□□ -0.91
CD53-204ENST00000476408 PPRC1Q5VV67 1664 aaKnown RBP9.39□□□□□ -0.91
CD53-204ENST00000476408 ERICH6Q7L0X2 663 aa9.39□□□□□ -0.91
CD53-204ENST00000476408 KTN1Q86UP2 1357 aaKnown RBP9.38□□□□□ -0.91
CD53-204ENST00000476408 ZMYM4Q5VZL5 1548 aa9.38□□□□□ -0.91
CD53-204ENST00000476408 ABCC2Q92887 1545 aa9.38□□□□□ -0.91
CD53-204ENST00000476408 FAM50AQ14320 339 aaKnown RBP9.38□□□□□ -0.91
CD53-204ENST00000476408 FHOD3Q2V2M9 1422 aa9.38□□□□□ -0.91
CD53-204ENST00000476408 CARMIL2Q6F5E8 1435 aa9.38□□□□□ -0.91
CD53-204ENST00000476408 INSRP06213 1382 aa9.37□□□□□ -0.91
CD53-204ENST00000476408 MTUS2Q5JR59 1369 aa9.37□□□□□ -0.91
CD53-204ENST00000476408 RPRD2Q5VT52 1461 aaKnown RBP9.37□□□□□ -0.91
CD53-204ENST00000476408 EIF4G2P78344 907 aaKnown RBP eCLIP9.37□□□□□ -0.91
CD53-204ENST00000476408 PTPRKQ15262 1439 aa9.37□□□□□ -0.91
CD53-204ENST00000476408 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
CD53-204ENST00000476408 ASXL2Q76L83 1435 aa9.37□□□□□ -0.91
CD53-204ENST00000476408 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
CD53-204ENST00000476408 BCANQ96GW7 911 aa9.36□□□□□ -0.91
CD53-204ENST00000476408 CCDC7Q96M83 1385 aa9.36□□□□□ -0.91
CD53-204ENST00000476408 DENND4BO75064 1496 aaPredicted RBP9.35□□□□□ -0.91
CD53-204ENST00000476408 HNRNPUQ00839 825 aaKnown RBP eCLIP9.35□□□□□ -0.91
CD53-204ENST00000476408 ROCK2O75116 1388 aaKnown RBP9.35□□□□□ -0.91
CD53-204ENST00000476408 UHRF1BP1LA0JNW5 1464 aa9.34□□□□□ -0.91
CD53-204ENST00000476408 TEX14Q8IWB6 1497 aa9.34□□□□□ -0.91
CD53-204ENST00000476408 WASHC2AQ641Q2 1341 aa9.34□□□□□ -0.91
CD53-204ENST00000476408 LRRIQ1Q96JM4 1722 aa9.34□□□□□ -0.91
CD53-204ENST00000476408 ITGAEP38570 1179 aa9.34□□□□□ -0.91
CD53-204ENST00000476408 RANGAP1P46060 587 aaPredicted RBP9.34□□□□□ -0.91
CD53-204ENST00000476408 PRKRIP1Q9H875 184 aaPredicted RBP9.34□□□□□ -0.91
CD53-204ENST00000476408 MAP3K4Q9Y6R4 1608 aa9.34□□□□□ -0.91
CD53-204ENST00000476408 COL17A1Q9UMD9 1497 aaPredicted RBP9.34□□□□□ -0.91
CD53-204ENST00000476408 USP35Q9P2H5 1018 aa9.33□□□□□ -0.92
CD53-204ENST00000476408 ILDR2Q71H61 639 aa9.32□□□□□ -0.92
CD53-204ENST00000476408 KCNA4P22459 653 aa9.31□□□□□ -0.92
CD53-204ENST00000476408 NOP58Q9Y2X3 529 aaKnown RBP9.31□□□□□ -0.92
CD53-204ENST00000476408 MBD5Q9P267 1494 aa9.31□□□□□ -0.92
CD53-204ENST00000476408 DNMT1P26358 1616 aaKnown RBP9.31□□□□□ -0.92
CD53-204ENST00000476408 EPRSP07814 1512 aaKnown RBP9.31□□□□□ -0.92
CD53-204ENST00000476408 IQGAP2Q13576 1575 aa9.3□□□□□ -0.92
CD53-204ENST00000476408 ANKRD30BQ9BXX2 1392 aa9.3□□□□□ -0.92
CD53-204ENST00000476408 HSPA5P11021 654 aaKnown RBP9.3□□□□□ -0.92
CD53-204ENST00000476408 MAPK8IP2Q13387 824 aaPredicted RBP9.3□□□□□ -0.92
CD53-204ENST00000476408 ARHGEF12Q9NZN5 1544 aa9.29□□□□□ -0.92
CD53-204ENST00000476408 UHRF1BP1Q6BDS2 1440 aa9.29□□□□□ -0.92
CD53-204ENST00000476408 KIF14Q15058 1648 aa9.28□□□□□ -0.92
CD53-204ENST00000476408 ZCCHC11Q5TAX3 1644 aaKnown RBP9.28□□□□□ -0.92
CD53-204ENST00000476408 DISP3Q9P2K9 1392 aa9.28□□□□□ -0.92
CD53-204ENST00000476408 ADGRL2O95490 1459 aa9.28□□□□□ -0.92
CD53-204ENST00000476408 IPO9Q96P70 1041 aaKnown RBP9.27□□□□□ -0.93
CD53-204ENST00000476408 NUDCQ9Y266 331 aa9.27□□□□□ -0.93
CD53-204ENST00000476408 MS4A1P11836 297 aa9.26□□□□□ -0.93
CD53-204ENST00000476408 ANP32AP39687 249 aaKnown RBP9.26□□□□□ -0.93
CD53-204ENST00000476408 DISP1Q96F81 1524 aa9.26□□□□□ -0.93
CD53-204ENST00000476408 DHX29Q7Z478 1369 aaKnown RBP9.25□□□□□ -0.93
CD53-204ENST00000476408 DEKP35659 375 aaKnown RBP9.25□□□□□ -0.93
CD53-204ENST00000476408 AMER1Q5JTC6 1135 aaPredicted RBP9.25□□□□□ -0.93
CD53-204ENST00000476408 DMRT2Q9Y5R5 561 aa9.25□□□□□ -0.93
CD53-204ENST00000476408 MAGI3Q5TCQ9 1506 aa9.25□□□□□ -0.93
CD53-204ENST00000476408 LRPPRCP42704 1394 aaKnown RBP9.24□□□□□ -0.93
CD53-204ENST00000476408 ADGBQ8N7X0 1667 aa9.24□□□□□ -0.93
CD53-204ENST00000476408 C11orf95C9JLR9 678 aaPredicted RBP9.24□□□□□ -0.93
CD53-204ENST00000476408 PDE3BQ13370 1112 aa9.24□□□□□ -0.93
CD53-204ENST00000476408 KDM5DQ9BY66 1539 aa9.24□□□□□ -0.93
CD53-204ENST00000476408 DAPK1P53355 1430 aa9.23□□□□□ -0.93
CD53-204ENST00000476408 CD109Q6YHK3 1445 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms