RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 ARHGAP5Q13017 1502 aa51.94■■■■■ 5.9
CHKB-207ENST00000476289 POGZQ7Z3K3 1410 aa51.93■■■■■ 5.9
CHKB-207ENST00000476289 CDC42BPBQ9Y5S2 1711 aa51.89■■■■■ 5.9
CHKB-207ENST00000476289 PREX2Q70Z35 1606 aa51.86■■■■■ 5.89
CHKB-207ENST00000476289 ZFYVE16Q7Z3T8 1539 aa51.84■■■■■ 5.89
CHKB-207ENST00000476289 YEATS2Q9ULM3 1422 aa51.83■■■■■ 5.89
CHKB-207ENST00000476289 ADAMTSL3P82987 1691 aa51.79■■■■■ 5.88
CHKB-207ENST00000476289 LOC105371045A0A1W2PR82 267 aa51.79■■■■■ 5.88
CHKB-207ENST00000476289 MAGI2Q86UL8 1455 aa51.79■■■■■ 5.88
CHKB-207ENST00000476289 BCORL1Q5H9F3 1711 aa51.76■■■■■ 5.88
CHKB-207ENST00000476289 CDC42BPAQ5VT25 1732 aa51.76■■■■■ 5.88
CHKB-207ENST00000476289 ARID4BQ4LE39 1312 aaPredicted RBP51.72■■■■■ 5.87
CHKB-207ENST00000476289 SIGLEC1Q9BZZ2 1709 aa51.7■■■■■ 5.87
CHKB-207ENST00000476289 ZNF518AQ6AHZ1 1483 aa51.68■■■■■ 5.86
CHKB-207ENST00000476289 ABCC1P33527 1531 aa51.65■■■■■ 5.86
CHKB-207ENST00000476289 KDM5CP41229 1560 aa51.65■■■■■ 5.86
CHKB-207ENST00000476289 MADDQ8WXG6 1647 aa51.61■■■■■ 5.85
CHKB-207ENST00000476289 ARHGEF12Q9NZN5 1544 aa51.6■■■■■ 5.85
CHKB-207ENST00000476289 AFAP1Q8N556 730 aa51.6■■■■■ 5.85
CHKB-207ENST00000476289 MTUS2Q5JR59 1369 aa51.59■■■■■ 5.85
CHKB-207ENST00000476289 GPATCH8Q9UKJ3 1502 aaKnown RBP51.59■■■■■ 5.85
CHKB-207ENST00000476289 ITSN2Q9NZM3 1697 aa51.57■■■■■ 5.85
CHKB-207ENST00000476289 PTPRMP28827 1452 aa51.56■■■■■ 5.84
CHKB-207ENST00000476289 TRAPPC8Q9Y2L5 1435 aa51.53■■■■■ 5.84
CHKB-207ENST00000476289 ATP10AO60312 1499 aa51.53■■■■■ 5.84
CHKB-207ENST00000476289 HECW2Q9P2P5 1572 aa51.52■■■■■ 5.84
CHKB-207ENST00000476289 EHBP1L1Q8N3D4 1523 aa51.51■■■■■ 5.84
CHKB-207ENST00000476289 SAMD9LQ8IVG5 1584 aa51.5■■■■■ 5.84
CHKB-207ENST00000476289 C9orf84Q5VXU9 1444 aa51.47■■■■■ 5.83
CHKB-207ENST00000476289 CCNB3Q8WWL7 1395 aa51.44■■■■■ 5.82
CHKB-207ENST00000476289 RIMS1Q86UR5 1692 aaKnown RBP51.43■■■■■ 5.82
CHKB-207ENST00000476289 DIP2CQ9Y2E4 1556 aa51.42■■■■■ 5.82
CHKB-207ENST00000476289 ZNF777Q9ULD5 760 aaPredicted RBP51.42■■■■■ 5.82
CHKB-207ENST00000476289 MLH3Q9UHC1 1453 aa51.41■■■■■ 5.82
CHKB-207ENST00000476289 VPS8Q8N3P4 1428 aa51.41■■■■■ 5.82
CHKB-207ENST00000476289 TIAM1Q13009 1591 aa51.39■■■■■ 5.82
CHKB-207ENST00000476289 SYCP2Q9BX26 1530 aa51.38■■■■■ 5.82
CHKB-207ENST00000476289 ABCA6Q8N139 1617 aa51.38■■■■■ 5.82
CHKB-207ENST00000476289 MYT1LQ9UL68 1186 aa51.35■■■■■ 5.81
CHKB-207ENST00000476289 CFDP1Q9UEE9 299 aaPredicted RBP51.34■■■■■ 5.81
CHKB-207ENST00000476289 MLECQ14165 292 aa51.33■■■■■ 5.81
CHKB-207ENST00000476289 KIDINS220Q9ULH0 1771 aa51.3■■■■■ 5.8
CHKB-207ENST00000476289 REREQ9P2R6 1566 aa51.28■■■■■ 5.8
CHKB-207ENST00000476289 FER1L4A9Z1Z3 1794 aa51.27■■■■■ 5.8
CHKB-207ENST00000476289 PLEKHH2Q8IVE3 1493 aa51.24■■■■■ 5.79
CHKB-207ENST00000476289 KIAA1107Q9UPP5 1409 aa51.24■■■■■ 5.79
CHKB-207ENST00000476289 HNRNPMP52272 730 aaKnown RBP eCLIP51.24■■■■■ 5.79
CHKB-207ENST00000476289 SUPT6HQ7KZ85 1726 aaKnown RBP51.21■■■■■ 5.79
CHKB-207ENST00000476289 NCOA2Q15596 1464 aa51.2■■■■■ 5.79
CHKB-207ENST00000476289 ZNF644Q9H582 1327 aaPredicted RBP51.14■■■■■ 5.78
CHKB-207ENST00000476289 SPAG9O60271 1321 aaKnown RBP51.11■■■■■ 5.77
CHKB-207ENST00000476289 LRRC9Q6ZRR7 1453 aa51.1■■■■■ 5.77
CHKB-207ENST00000476289 AGLP35573 1532 aa51.1■■■■■ 5.77
CHKB-207ENST00000476289 INO80Q9ULG1 1556 aaPredicted RBP51.09■■■■■ 5.77
CHKB-207ENST00000476289 ATP7AQ04656 1500 aa51.08■■■■■ 5.77
CHKB-207ENST00000476289 PLPPR3Q6T4P5 718 aa51.07■■■■■ 5.77
CHKB-207ENST00000476289 MAP3K1Q13233 1512 aa51.04■■■■■ 5.76
CHKB-207ENST00000476289 MBD5Q9P267 1494 aa51.03■■■■■ 5.76
CHKB-207ENST00000476289 LMTK3Q96Q04 1460 aa51.01■■■■■ 5.76
CHKB-207ENST00000476289 KANK4Q5T7N3 995 aaPredicted RBP50.96■■■■■ 5.75
CHKB-207ENST00000476289 CAMSAP2Q08AD1 1489 aa50.94■■■■■ 5.75
CHKB-207ENST00000476289 PLXNC1O60486 1568 aa50.89■■■■■ 5.74
CHKB-207ENST00000476289 CEBPAP49715 358 aaPredicted RBP50.85■■■■■ 5.73
CHKB-207ENST00000476289 A2MP01023 1474 aa50.84■■■■■ 5.73
CHKB-207ENST00000476289 CCDC141Q6ZP82 1450 aa50.81■■■■■ 5.72
CHKB-207ENST00000476289 ADGBQ8N7X0 1667 aa50.79■■■■■ 5.72
CHKB-207ENST00000476289 RTEL1-TNFRSF6BF6WH68 1400 aa50.78■■■■■ 5.72
CHKB-207ENST00000476289 C3P01024 1663 aa50.76■■■■■ 5.72
CHKB-207ENST00000476289 ARHGEF5Q12774 1597 aa50.72■■■■■ 5.71
CHKB-207ENST00000476289 PREX1Q8TCU6 1659 aa50.71■■■■■ 5.71
CHKB-207ENST00000476289 HSPA2P54652 639 aa50.71■■■■■ 5.71
CHKB-207ENST00000476289 ESF1Q9H501 851 aaKnown RBP50.7■■■■■ 5.71
CHKB-207ENST00000476289 MYOM3Q5VTT5 1437 aa50.69■■■■■ 5.7
CHKB-207ENST00000476289 CNTLNQ9NXG0 1405 aa50.68■■■■■ 5.7
CHKB-207ENST00000476289 APLP2Q06481 763 aa50.64■■■■■ 5.7
CHKB-207ENST00000476289 RSPH4AQ5TD94 716 aa50.64■■■■■ 5.7
CHKB-207ENST00000476289 MIA2Q96PC5 1412 aa50.62■■■■■ 5.69
CHKB-207ENST00000476289 MROH2AA6NES4 1674 aa50.6■■■■■ 5.69
CHKB-207ENST00000476289 DHX29Q7Z478 1369 aaKnown RBP50.56■■■■■ 5.69
CHKB-207ENST00000476289 CLTCQ00610 1675 aaKnown RBP50.55■■■■■ 5.68
CHKB-207ENST00000476289 SETD1BQ9UPS6 1966 aaKnown RBP50.55■■■■■ 5.68
CHKB-207ENST00000476289 GGT6Q6P531 493 aa50.52■■■■■ 5.68
CHKB-207ENST00000476289 UHRF1BP1Q6BDS2 1440 aa50.51■■■■■ 5.68
CHKB-207ENST00000476289 MAST1Q9Y2H9 1570 aa50.47■■■■■ 5.67
CHKB-207ENST00000476289 ZMYM3Q14202 1370 aa50.47■■■■■ 5.67
CHKB-207ENST00000476289 TSPY4P0CV99 314 aa50.47■■■■■ 5.67
CHKB-207ENST00000476289 TSPY10P0CW01 314 aa50.47■■■■■ 5.67
CHKB-207ENST00000476289 PTPN23Q9H3S7 1636 aa50.39■■■■■ 5.66
CHKB-207ENST00000476289 NPATQ14207 1427 aa50.38■■■■■ 5.66
CHKB-207ENST00000476289 KIF3BO15066 747 aa50.37■■■■■ 5.65
CHKB-207ENST00000476289 PPP6R1Q9UPN7 881 aa50.36■■■■■ 5.65
CHKB-207ENST00000476289 FGD6Q6ZV73 1430 aa50.33■■■■■ 5.65
CHKB-207ENST00000476289 CROCC2H7BZ55 1655 aa50.28■■■■■ 5.64
CHKB-207ENST00000476289 PTPRKQ15262 1439 aa50.28■■■■■ 5.64
CHKB-207ENST00000476289 STRCQ7RTU9 1775 aa50.26■■■■■ 5.64
CHKB-207ENST00000476289 ILDR1Q86SU0 546 aaPredicted RBP50.26■■■■■ 5.64
CHKB-207ENST00000476289 TCOF1Q13428 1488 aaKnown RBP50.26■■■■■ 5.64
CHKB-207ENST00000476289 ABCC5O15440 1437 aa50.24■■■■■ 5.63
CHKB-207ENST00000476289 KDM5DQ9BY66 1539 aa50.23■■■■■ 5.63
CHKB-207ENST00000476289 FAM135AQ9P2D6 1515 aa50.21■■■■■ 5.63
Retrieved 100 of 20,778 RNA–protein pairs in 704.6 ms