RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 BOLA1Q9Y3E2 137 aa9.66□□□□□ -0.86
SDHB-204ENST00000475049 BCANQ96GW7 911 aa9.65□□□□□ -0.86
SDHB-204ENST00000475049 PHF8Q9UPP1 1060 aa9.65□□□□□ -0.86
SDHB-204ENST00000475049 TMEM121BQ9BXQ6 578 aaPredicted RBP9.64□□□□□ -0.87
SDHB-204ENST00000475049 MS4A4AQ96JQ5 239 aa9.62□□□□□ -0.87
SDHB-204ENST00000475049 ST18O60284 1047 aa9.61□□□□□ -0.87
SDHB-204ENST00000475049 G3V3G9 751 aa9.6□□□□□ -0.87
SDHB-204ENST00000475049 SNPHO15079 494 aa9.6□□□□□ -0.87
SDHB-204ENST00000475049 FBXO22Q8NEZ5 403 aa9.6□□□□□ -0.87
SDHB-204ENST00000475049 PPP1R37O75864 691 aa9.58□□□□□ -0.88
SDHB-204ENST00000475049 PCDH10Q9P2E7 1040 aa9.57□□□□□ -0.88
SDHB-204ENST00000475049 MICALL2Q8IY33 904 aa9.56□□□□□ -0.88
SDHB-204ENST00000475049 WDR70Q9NW82 654 aa9.56□□□□□ -0.88
SDHB-204ENST00000475049 CADPS2Q86UW7 1296 aa9.55□□□□□ -0.88
SDHB-204ENST00000475049 NBR1Q14596 966 aa9.53□□□□□ -0.88
SDHB-204ENST00000475049 HOXB3P14651 431 aaPredicted RBP9.5□□□□□ -0.89
SDHB-204ENST00000475049 TMEM92Q6UXU6 159 aa9.5□□□□□ -0.89
SDHB-204ENST00000475049 MARVELD3Q96A59 401 aa9.47□□□□□ -0.89
SDHB-204ENST00000475049 PLSCR2Q9NRY7 297 aa9.46□□□□□ -0.9
SDHB-204ENST00000475049 P3H3Q8IVL6 736 aa9.45□□□□□ -0.9
SDHB-204ENST00000475049 CDAN1Q8IWY9 1227 aa9.45□□□□□ -0.9
SDHB-204ENST00000475049 PDE4AP27815 886 aa9.42□□□□□ -0.9
SDHB-204ENST00000475049 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
SDHB-204ENST00000475049 LARP6Q9BRS8 491 aaKnown RBP9.42□□□□□ -0.9
SDHB-204ENST00000475049 EMP3P54852 163 aa9.4□□□□□ -0.9
SDHB-204ENST00000475049 NCKAP5LQ9HCH0 1330 aa9.39□□□□□ -0.91
SDHB-204ENST00000475049 HOXB1P14653 301 aaPredicted RBP9.39□□□□□ -0.91
SDHB-204ENST00000475049 KCNV2Q8TDN2 545 aa9.39□□□□□ -0.91
SDHB-204ENST00000475049 KIF3CO14782 793 aa9.38□□□□□ -0.91
SDHB-204ENST00000475049 ZNF710Q8N1W2 664 aa9.38□□□□□ -0.91
SDHB-204ENST00000475049 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
SDHB-204ENST00000475049 E2F4Q16254 413 aa9.37□□□□□ -0.91
SDHB-204ENST00000475049 POTEBQ6S5H4 581 aa9.37□□□□□ -0.91
SDHB-204ENST00000475049 DDX27Q96GQ7 796 aaKnown RBP9.36□□□□□ -0.91
SDHB-204ENST00000475049 CRISPLD2Q9H0B8 497 aa9.36□□□□□ -0.91
SDHB-204ENST00000475049 RIMBP2O15034 1052 aa9.35□□□□□ -0.91
SDHB-204ENST00000475049 ZSWIM6Q9HCJ5 1215 aa9.35□□□□□ -0.91
SDHB-204ENST00000475049 C2orf72A6NCS6 295 aa9.34□□□□□ -0.91
SDHB-204ENST00000475049 FAM205CA6NFA0 338 aa9.34□□□□□ -0.91
SDHB-204ENST00000475049 TPRNQ4KMQ1 711 aa9.34□□□□□ -0.91
SDHB-204ENST00000475049 HS3ST6Q96QI5 342 aa9.34□□□□□ -0.91
SDHB-204ENST00000475049 PRKCSHP14314 528 aaPredicted RBP9.33□□□□□ -0.92
SDHB-204ENST00000475049 GPR153Q6NV75 609 aa9.33□□□□□ -0.92
SDHB-204ENST00000475049 TMC2Q8TDI7 906 aa9.33□□□□□ -0.92
SDHB-204ENST00000475049 MFSD10Q14728 455 aa9.32□□□□□ -0.92
SDHB-204ENST00000475049 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
SDHB-204ENST00000475049 GPHNQ9NQX3 736 aaPredicted RBP9.3□□□□□ -0.92
SDHB-204ENST00000475049 PPP1R15BQ5SWA1 713 aa9.29□□□□□ -0.92
SDHB-204ENST00000475049 ERBB3P21860 1342 aa9.28□□□□□ -0.92
SDHB-204ENST00000475049 ARSIQ5FYB1 569 aa9.27□□□□□ -0.93
SDHB-204ENST00000475049 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
SDHB-204ENST00000475049 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
SDHB-204ENST00000475049 TULP1O00294 542 aaPredicted RBP9.25□□□□□ -0.93
SDHB-204ENST00000475049 SLC34A2O95436 690 aa9.25□□□□□ -0.93
SDHB-204ENST00000475049 DSG2Q14126 1118 aa9.25□□□□□ -0.93
SDHB-204ENST00000475049 SPNS2Q8IVW8 549 aa9.24□□□□□ -0.93
SDHB-204ENST00000475049 VARS2Q5ST30 1063 aaKnown RBP9.23□□□□□ -0.93
SDHB-204ENST00000475049 KHSRPQ92945 711 aaKnown RBP eCLIP9.23□□□□□ -0.93
SDHB-204ENST00000475049 CAMK2BQ13554 666 aa9.22□□□□□ -0.93
SDHB-204ENST00000475049 FOXK1P85037 733 aa9.21□□□□□ -0.94
SDHB-204ENST00000475049 PLPP6Q8IY26 295 aa9.21□□□□□ -0.94
SDHB-204ENST00000475049 SEMA3EO15041 775 aa9.2□□□□□ -0.94
SDHB-204ENST00000475049 PCDHGA4Q9Y5G9 962 aa9.2□□□□□ -0.94
SDHB-204ENST00000475049 ZNF687Q8N1G0 1237 aa9.19□□□□□ -0.94
SDHB-204ENST00000475049 ZNF316A6NFI3 1004 aaPredicted RBP9.18□□□□□ -0.94
SDHB-204ENST00000475049 MMRN1Q13201 1228 aa9.18□□□□□ -0.94
SDHB-204ENST00000475049 DPYSL4O14531 572 aa9.17□□□□□ -0.94
SDHB-204ENST00000475049 LMOD2Q6P5Q4 547 aa9.17□□□□□ -0.94
SDHB-204ENST00000475049 ARIH1Q9Y4X5 557 aaPredicted RBP9.17□□□□□ -0.94
SDHB-204ENST00000475049 NUDT7P0C024 238 aa9.16□□□□□ -0.94
SDHB-204ENST00000475049 SMYD5Q6GMV2 418 aa9.16□□□□□ -0.94
SDHB-204ENST00000475049 PTCD2Q8WV60 388 aaKnown RBP9.16□□□□□ -0.94
SDHB-204ENST00000475049 EMILIN3Q9NT22 766 aa9.16□□□□□ -0.94
SDHB-204ENST00000475049 TESPA1A2RU30 521 aaPredicted RBP9.15□□□□□ -0.94
SDHB-204ENST00000475049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.15□□□□□ -0.94
SDHB-204ENST00000475049 KDM4FA0A1W2PPD8 638 aa9.14□□□□□ -0.95
SDHB-204ENST00000475049 MAP3K9P80192 1104 aa9.13□□□□□ -0.95
SDHB-204ENST00000475049 UPF1Q92900 1129 aaKnown RBP eCLIP9.13□□□□□ -0.95
SDHB-204ENST00000475049 LHX6Q9UPM6 363 aa9.12□□□□□ -0.95
SDHB-204ENST00000475049 SPDYE16A6NNV3 312 aaPredicted RBP9.11□□□□□ -0.95
SDHB-204ENST00000475049 MLLT3P42568 568 aaPredicted RBP9.08□□□□□ -0.96
SDHB-204ENST00000475049 PDIA6Q15084 440 aa9.08□□□□□ -0.96
SDHB-204ENST00000475049 OXER1Q8TDS5 423 aa9.08□□□□□ -0.96
SDHB-204ENST00000475049 TBC1D12O60347 775 aa9.07□□□□□ -0.96
SDHB-204ENST00000475049 POTEEQ6S8J3 1075 aa9.05□□□□□ -0.96
SDHB-204ENST00000475049 PSDA5PKW4 1024 aaPredicted RBP9.04□□□□□ -0.96
SDHB-204ENST00000475049 GRXCR2A6NFK2 248 aa9.04□□□□□ -0.96
SDHB-204ENST00000475049 PBX2P40425 430 aa9.04□□□□□ -0.96
SDHB-204ENST00000475049 LSM11P83369 360 aaKnown RBP eCLIP9.03□□□□□ -0.96
SDHB-204ENST00000475049 ZC3H15Q8WU90 426 aaKnown RBP9.03□□□□□ -0.96
SDHB-204ENST00000475049 RBM26Q5T8P6 1007 aaKnown RBP9.02□□□□□ -0.97
SDHB-204ENST00000475049 EVI5O60447 810 aa9.01□□□□□ -0.97
SDHB-204ENST00000475049 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
SDHB-204ENST00000475049 GPIHBP1Q8IV16 184 aa9□□□□□ -0.97
SDHB-204ENST00000475049 AXIN2Q9Y2T1 843 aa9□□□□□ -0.97
SDHB-204ENST00000475049 DDX12PQ92771 950 aa8.99□□□□□ -0.97
SDHB-204ENST00000475049 ARHGAP33O14559 1287 aa8.98□□□□□ -0.97
SDHB-204ENST00000475049 PTGER2P43116 358 aa8.97□□□□□ -0.97
SDHB-204ENST00000475049 ANO8Q9HCE9 1232 aaPredicted RBP8.97□□□□□ -0.97
SDHB-204ENST00000475049 MYT1LQ9UL68 1186 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms