RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 KIF14Q15058 1648 aa23.67■■□□□ 1.38
COL2A1-205ENST00000474996 CDK11AQ9UQ88 783 aaPredicted RBP23.67■■□□□ 1.38
COL2A1-205ENST00000474996 MAGI2Q86UL8 1455 aa23.67■■□□□ 1.38
COL2A1-205ENST00000474996 POGZQ7Z3K3 1410 aa23.67■■□□□ 1.38
COL2A1-205ENST00000474996 LRRIQ1Q96JM4 1722 aa23.66■■□□□ 1.38
COL2A1-205ENST00000474996 PCF11O94913 1555 aaKnown RBP23.64■■□□□ 1.37
COL2A1-205ENST00000474996 TROQ12816 1431 aaPredicted RBP23.63■■□□□ 1.37
COL2A1-205ENST00000474996 EFCAB2Q5VUJ9 269 aa23.63■■□□□ 1.37
COL2A1-205ENST00000474996 LMTK3Q96Q04 1460 aa23.61■■□□□ 1.37
COL2A1-205ENST00000474996 CLIP1P30622 1438 aa23.59■■□□□ 1.37
COL2A1-205ENST00000474996 PLPPR3Q6T4P5 718 aa23.59■■□□□ 1.37
COL2A1-205ENST00000474996 MLECQ14165 292 aa23.58■■□□□ 1.37
COL2A1-205ENST00000474996 ARHGAP5Q13017 1502 aa23.58■■□□□ 1.36
COL2A1-205ENST00000474996 FER1L4A9Z1Z3 1794 aa23.56■■□□□ 1.36
COL2A1-205ENST00000474996 ATP10AO60312 1499 aa23.56■■□□□ 1.36
COL2A1-205ENST00000474996 C9orf84Q5VXU9 1444 aa23.54■■□□□ 1.36
COL2A1-205ENST00000474996 ZNF518AQ6AHZ1 1483 aa23.53■■□□□ 1.36
COL2A1-205ENST00000474996 CASKIN1Q8WXD9 1431 aa23.52■■□□□ 1.36
COL2A1-205ENST00000474996 CDC42BPBQ9Y5S2 1711 aa23.52■■□□□ 1.36
COL2A1-205ENST00000474996 CCDC18Q5T9S5 1454 aa23.5■■□□□ 1.35
COL2A1-205ENST00000474996 KDM5CP41229 1560 aa23.5■■□□□ 1.35
COL2A1-205ENST00000474996 AFAP1Q8N556 730 aa23.5■■□□□ 1.35
COL2A1-205ENST00000474996 ARHGEF12Q9NZN5 1544 aa23.49■■□□□ 1.35
COL2A1-205ENST00000474996 HSPA2P54652 639 aa23.49■■□□□ 1.35
COL2A1-205ENST00000474996 PREX2Q70Z35 1606 aa23.48■■□□□ 1.35
COL2A1-205ENST00000474996 MYT1LQ9UL68 1186 aa23.46■■□□□ 1.35
COL2A1-205ENST00000474996 FBXO41Q8TF61 875 aa23.45■■□□□ 1.34
COL2A1-205ENST00000474996 DIP2CQ9Y2E4 1556 aa23.44■■□□□ 1.34
COL2A1-205ENST00000474996 ABCC1P33527 1531 aa23.43■■□□□ 1.34
COL2A1-205ENST00000474996 FYCO1Q9BQS8 1478 aa23.43■■□□□ 1.34
COL2A1-205ENST00000474996 CDC42BPAQ5VT25 1732 aa23.42■■□□□ 1.34
COL2A1-205ENST00000474996 ITSN2Q9NZM3 1697 aa23.41■■□□□ 1.34
COL2A1-205ENST00000474996 TRAPPC8Q9Y2L5 1435 aa23.41■■□□□ 1.34
COL2A1-205ENST00000474996 ABCA6Q8N139 1617 aa23.41■■□□□ 1.34
COL2A1-205ENST00000474996 MLH3Q9UHC1 1453 aa23.4■■□□□ 1.34
COL2A1-205ENST00000474996 CEBPAP49715 358 aaPredicted RBP23.39■■□□□ 1.33
COL2A1-205ENST00000474996 REREQ9P2R6 1566 aa23.39■■□□□ 1.33
COL2A1-205ENST00000474996 PREX1Q8TCU6 1659 aa23.37■■□□□ 1.33
COL2A1-205ENST00000474996 KIDINS220Q9ULH0 1771 aa23.33■■□□□ 1.33
COL2A1-205ENST00000474996 ZNF777Q9ULD5 760 aaPredicted RBP23.31■■□□□ 1.32
COL2A1-205ENST00000474996 AGLP35573 1532 aa23.31■■□□□ 1.32
COL2A1-205ENST00000474996 SAMD9LQ8IVG5 1584 aa23.31■■□□□ 1.32
COL2A1-205ENST00000474996 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
COL2A1-205ENST00000474996 SETD1BQ9UPS6 1966 aaKnown RBP23.28■■□□□ 1.32
COL2A1-205ENST00000474996 C3P01024 1663 aa23.28■■□□□ 1.32
COL2A1-205ENST00000474996 SYCP2Q9BX26 1530 aa23.28■■□□□ 1.32
COL2A1-205ENST00000474996 UHRF1BP1Q6BDS2 1440 aa23.25■■□□□ 1.31
COL2A1-205ENST00000474996 ESF1Q9H501 851 aaKnown RBP23.24■■□□□ 1.31
COL2A1-205ENST00000474996 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
COL2A1-205ENST00000474996 STRCQ7RTU9 1775 aa23.22■■□□□ 1.31
COL2A1-205ENST00000474996 CERKQ8TCT0 537 aa23.21■■□□□ 1.31
COL2A1-205ENST00000474996 CFDP1Q9UEE9 299 aaPredicted RBP23.21■■□□□ 1.31
COL2A1-205ENST00000474996 SPAG9O60271 1321 aaKnown RBP23.21■■□□□ 1.31
COL2A1-205ENST00000474996 MTUS2Q5JR59 1369 aa23.21■■□□□ 1.31
COL2A1-205ENST00000474996 CCNB3Q8WWL7 1395 aa23.21■■□□□ 1.31
COL2A1-205ENST00000474996 SUPT6HQ7KZ85 1726 aaKnown RBP23.19■■□□□ 1.3
COL2A1-205ENST00000474996 ATP7AQ04656 1500 aa23.18■■□□□ 1.3
COL2A1-205ENST00000474996 PLEKHH2Q8IVE3 1493 aa23.18■■□□□ 1.3
COL2A1-205ENST00000474996 KIAA1107Q9UPP5 1409 aa23.18■■□□□ 1.3
COL2A1-205ENST00000474996 CNTLNQ9NXG0 1405 aa23.17■■□□□ 1.3
COL2A1-205ENST00000474996 INO80Q9ULG1 1556 aaPredicted RBP23.16■■□□□ 1.3
COL2A1-205ENST00000474996 DMRT2Q9Y5R5 561 aa23.15■■□□□ 1.3
COL2A1-205ENST00000474996 TIAM1Q13009 1591 aa23.14■■□□□ 1.29
COL2A1-205ENST00000474996 MROH2AA6NES4 1674 aa23.13■■□□□ 1.29
COL2A1-205ENST00000474996 EHBP1L1Q8N3D4 1523 aa23.13■■□□□ 1.29
COL2A1-205ENST00000474996 PLXNC1O60486 1568 aa23.12■■□□□ 1.29
COL2A1-205ENST00000474996 A2MP01023 1474 aa23.11■■□□□ 1.29
COL2A1-205ENST00000474996 CEP162Q5TB80 1403 aa23.11■■□□□ 1.29
COL2A1-205ENST00000474996 ZNF644Q9H582 1327 aaPredicted RBP23.1■■□□□ 1.29
COL2A1-205ENST00000474996 ZMYM3Q14202 1370 aa23.09■■□□□ 1.29
COL2A1-205ENST00000474996 CLTCQ00610 1675 aaKnown RBP23.09■■□□□ 1.29
COL2A1-205ENST00000474996 PTPRTO14522 1441 aa23.07■■□□□ 1.28
COL2A1-205ENST00000474996 NPATQ14207 1427 aa23.07■■□□□ 1.28
COL2A1-205ENST00000474996 ADGBQ8N7X0 1667 aa23.06■■□□□ 1.28
COL2A1-205ENST00000474996 MBD5Q9P267 1494 aa23.05■■□□□ 1.28
COL2A1-205ENST00000474996 GGT6Q6P531 493 aa23.04■■□□□ 1.28
COL2A1-205ENST00000474996 NCOA1Q15788 1441 aa23.04■■□□□ 1.28
COL2A1-205ENST00000474996 CAMSAP1Q5T5Y3 1602 aa23.01■■□□□ 1.27
COL2A1-205ENST00000474996 RTEL1-TNFRSF6BF6WH68 1400 aa22.99■■□□□ 1.27
COL2A1-205ENST00000474996 NCOA2Q15596 1464 aa22.98■■□□□ 1.27
COL2A1-205ENST00000474996 MYO3AQ8NEV4 1616 aa22.98■■□□□ 1.27
COL2A1-205ENST00000474996 PTPRKQ15262 1439 aa22.98■■□□□ 1.27
COL2A1-205ENST00000474996 CAMSAP2Q08AD1 1489 aa22.96■■□□□ 1.27
COL2A1-205ENST00000474996 ZNF142P52746 1687 aaPredicted RBP22.96■■□□□ 1.27
COL2A1-205ENST00000474996 LTBP4Q8N2S1 1624 aa22.95■■□□□ 1.26
COL2A1-205ENST00000474996 PPP6R1Q9UPN7 881 aa22.95■■□□□ 1.26
COL2A1-205ENST00000474996 CCDC141Q6ZP82 1450 aa22.94■■□□□ 1.26
COL2A1-205ENST00000474996 DHX29Q7Z478 1369 aaKnown RBP22.94■■□□□ 1.26
COL2A1-205ENST00000474996 CEP170BQ9Y4F5 1589 aaPredicted RBP22.93■■□□□ 1.26
COL2A1-205ENST00000474996 NCKAP5LQ9HCH0 1330 aa22.92■■□□□ 1.26
COL2A1-205ENST00000474996 PLA2R1Q13018 1463 aa22.88■■□□□ 1.25
COL2A1-205ENST00000474996 LOC105371045A0A1W2PR82 267 aa22.88■■□□□ 1.25
COL2A1-205ENST00000474996 KIF3BO15066 747 aa22.88■■□□□ 1.25
COL2A1-205ENST00000474996 RSPH4AQ5TD94 716 aa22.88■■□□□ 1.25
COL2A1-205ENST00000474996 VPS8Q8N3P4 1428 aa22.87■■□□□ 1.25
COL2A1-205ENST00000474996 ARHGEF5Q12774 1597 aa22.86■■□□□ 1.25
COL2A1-205ENST00000474996 TCOF1Q13428 1488 aaKnown RBP22.85■■□□□ 1.25
COL2A1-205ENST00000474996 LRRC9Q6ZRR7 1453 aa22.85■■□□□ 1.25
COL2A1-205ENST00000474996 PKD2Q13563 968 aa22.85■■□□□ 1.25
COL2A1-205ENST00000474996 IQSEC2Q5JU85 1478 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms